RNA–Protein interactions for RNA: ENST00000491539.5

NCK1-211, Transcript of NCK adaptor protein 1, humanhuman

TSL 4

Gene NCK1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-211ENST00000491539 C11orf49Q9H6J7 331 aa17.1■□□□□ 0.33
NCK1-211ENST00000491539 TXNRD2Q9NNW7 524 aa17.1■□□□□ 0.33
NCK1-211ENST00000491539 MTMR10Q9NXD2 777 aa17.1■□□□□ 0.33
NCK1-211ENST00000491539 PNMA3Q9UL41 463 aa17.1■□□□□ 0.33
NCK1-211ENST00000491539 GPR75-ASB3A0A0A6YYF3 556 aa17.09■□□□□ 0.33
NCK1-211ENST00000491539 MS4A1P11836 297 aa17.09■□□□□ 0.33
NCK1-211ENST00000491539 PRKAR2AP13861 404 aaKnown RBP17.09■□□□□ 0.33
NCK1-211ENST00000491539 OS9Q13438 667 aaPredicted RBP17.09■□□□□ 0.33
NCK1-211ENST00000491539 MAP3K21Q5TCX8 1036 aa17.09■□□□□ 0.33
NCK1-211ENST00000491539 TDHQ8IZJ6 230 aa17.09■□□□□ 0.33
NCK1-211ENST00000491539 ZNF280CQ8ND82 737 aa17.09■□□□□ 0.33
NCK1-211ENST00000491539 NBPF3Q9H094 633 aa17.09■□□□□ 0.33
NCK1-211ENST00000491539 OSBPL5Q9H0X9 879 aaPredicted RBP17.09■□□□□ 0.33
NCK1-211ENST00000491539 DNAJC18Q9H819 358 aa17.09■□□□□ 0.33
NCK1-211ENST00000491539 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.09■□□□□ 0.33
NCK1-211ENST00000491539 OGDHLQ9ULD0 1010 aa17.09■□□□□ 0.33
NCK1-211ENST00000491539 RPTORQ8N122 1335 aa17.09■□□□□ 0.33
NCK1-211ENST00000491539 UQCRFS1P1P0C7P4 283 aa17.08■□□□□ 0.32
NCK1-211ENST00000491539 CYP2B6P20813 491 aa17.08■□□□□ 0.32
NCK1-211ENST00000491539 MTMR2Q13614 643 aa17.08■□□□□ 0.32
NCK1-211ENST00000491539 LRIT3Q3SXY7 679 aa17.08■□□□□ 0.32
NCK1-211ENST00000491539 POTEEQ6S8J3 1075 aa17.08■□□□□ 0.32
NCK1-211ENST00000491539 ERICH6Q7L0X2 663 aa17.08■□□□□ 0.32
NCK1-211ENST00000491539 SLF2Q8IX21 1173 aa17.08■□□□□ 0.32
NCK1-211ENST00000491539 DBNDD2Q9BQY9 259 aa17.08■□□□□ 0.32
NCK1-211ENST00000491539 HMX1Q9NP08 348 aaPredicted RBP17.08■□□□□ 0.32
NCK1-211ENST00000491539 MORF4L1Q9UBU8 362 aa17.08■□□□□ 0.32
NCK1-211ENST00000491539 STXBP5LQ9Y2K9 1186 aa17.08■□□□□ 0.32
NCK1-211ENST00000491539 TBC1D12O60347 775 aa17.07■□□□□ 0.32
NCK1-211ENST00000491539 COL6A1P12109 1028 aa17.07■□□□□ 0.32
NCK1-211ENST00000491539 CCL14Q16627 93 aa17.07■□□□□ 0.32
NCK1-211ENST00000491539 TBC1D9Q6ZT07 1266 aa17.07■□□□□ 0.32
NCK1-211ENST00000491539 NSUN4Q96CB9 384 aaKnown RBP17.07■□□□□ 0.32
NCK1-211ENST00000491539 RCAN3Q9UKA8 241 aa17.07■□□□□ 0.32
NCK1-211ENST00000491539 COL11A1P12107 1806 aaPredicted RBP17.07■□□□□ 0.32
NCK1-211ENST00000491539 CCND3P30281 292 aaPredicted RBP17.06■□□□□ 0.32
NCK1-211ENST00000491539 CAP2P40123 477 aa17.06■□□□□ 0.32
NCK1-211ENST00000491539 GCLCP48506 637 aaPredicted RBP17.06■□□□□ 0.32
NCK1-211ENST00000491539 LRRC26Q2I0M4 334 aa17.06■□□□□ 0.32
NCK1-211ENST00000491539 SH3D19Q5HYK7 790 aa17.06■□□□□ 0.32
NCK1-211ENST00000491539 GPR153Q6NV75 609 aa17.06■□□□□ 0.32
NCK1-211ENST00000491539 ZNF512BQ96KM6 892 aaPredicted RBP17.06■□□□□ 0.32
NCK1-211ENST00000491539 COL25A1Q9BXS0 654 aaPredicted RBP17.06■□□□□ 0.32
NCK1-211ENST00000491539 DBNLQ9UJU6 430 aaKnown RBP17.06■□□□□ 0.32
NCK1-211ENST00000491539 CCDC158Q5M9N0 1113 aa17.05■□□□□ 0.32
NCK1-211ENST00000491539 SH3RF3Q8TEJ3 882 aaPredicted RBP17.05■□□□□ 0.32
NCK1-211ENST00000491539 EAF2Q96CJ1 260 aaPredicted RBP17.05■□□□□ 0.32
NCK1-211ENST00000491539 GUCD1Q96NT3 240 aa17.05■□□□□ 0.32
NCK1-211ENST00000491539 UBE2OQ9C0C9 1292 aaKnown RBP17.05■□□□□ 0.32
NCK1-211ENST00000491539 PORCNQ9H237 461 aa17.05■□□□□ 0.32
NCK1-211ENST00000491539 ZBTB40Q9NUA8 1239 aa17.05■□□□□ 0.32
NCK1-211ENST00000491539 DDX19BQ9UMR2 479 aa17.05■□□□□ 0.32
NCK1-211ENST00000491539 PLXNA1Q9UIW2 1896 aa17.04■□□□□ 0.32
NCK1-211ENST00000491539 NPM3O75607 178 aaKnown RBP17.04■□□□□ 0.32
NCK1-211ENST00000491539 GSTO1P78417 241 aa17.04■□□□□ 0.32
NCK1-211ENST00000491539 MDM2Q00987 491 aaPredicted RBP17.04■□□□□ 0.32
NCK1-211ENST00000491539 CACNB2Q08289 660 aaPredicted RBP17.04■□□□□ 0.32
NCK1-211ENST00000491539 TTC39AQ5SRH9 613 aa17.04■□□□□ 0.32
NCK1-211ENST00000491539 TLR7Q9NYK1 1049 aaKnown RBP17.04■□□□□ 0.32
NCK1-211ENST00000491539 EXOC6BQ9Y2D4 811 aa17.04■□□□□ 0.32
NCK1-211ENST00000491539 COG6Q9Y2V7 657 aa17.04■□□□□ 0.32
NCK1-211ENST00000491539 USP17L5A8MUK1 530 aa17.03■□□□□ 0.32
NCK1-211ENST00000491539 GDF11O95390 407 aa17.03■□□□□ 0.32
NCK1-211ENST00000491539 MAP4K4O95819 1239 aaPredicted RBP17.03■□□□□ 0.32
NCK1-211ENST00000491539 LDHCP07864 332 aa17.03■□□□□ 0.32
NCK1-211ENST00000491539 CAPN2P17655 700 aa17.03■□□□□ 0.32
NCK1-211ENST00000491539 HERVK_113P62684 666 aa17.03■□□□□ 0.32
NCK1-211ENST00000491539 LHX8Q68G74 356 aa17.03■□□□□ 0.32
NCK1-211ENST00000491539 ADGRA1Q86SQ6 560 aa17.03■□□□□ 0.32
NCK1-211ENST00000491539 USP6NLQ92738 828 aa17.03■□□□□ 0.32
NCK1-211ENST00000491539 P2RX7Q99572 595 aaKnown RBP17.03■□□□□ 0.32
NCK1-211ENST00000491539 CCDC8Q9H0W5 538 aaPredicted RBP17.03■□□□□ 0.32
NCK1-211ENST00000491539 SNRKQ9NRH2 765 aa17.03■□□□□ 0.32
NCK1-211ENST00000491539 RAI14Q9P0K7 980 aa17.03■□□□□ 0.32
NCK1-211ENST00000491539 MUC3AQ02505 3323 aa17.03■□□□□ 0.32
NCK1-211ENST00000491539 IGSF3O75054 1194 aa17.02■□□□□ 0.32
NCK1-211ENST00000491539 CYP2E1P05181 493 aaPredicted RBP17.02■□□□□ 0.32
NCK1-211ENST00000491539 IRX3P78415 501 aaPredicted RBP17.02■□□□□ 0.32
NCK1-211ENST00000491539 ERC1Q8IUD2 1116 aa17.02■□□□□ 0.32
NCK1-211ENST00000491539 SIRT2Q8IXJ6 389 aa17.02■□□□□ 0.32
NCK1-211ENST00000491539 RPAP2Q8IXW5 612 aaPredicted RBP17.02■□□□□ 0.32
NCK1-211ENST00000491539 TEX11Q8IYF3 940 aa17.02■□□□□ 0.32
NCK1-211ENST00000491539 LRP2BPQ9P2M1 347 aa17.02■□□□□ 0.32
NCK1-211ENST00000491539 FLT1P17948 1338 aa17.01■□□□□ 0.31
NCK1-211ENST00000491539 ZKSCAN1P17029 563 aaPredicted RBP17.01■□□□□ 0.31
NCK1-211ENST00000491539 PABPC4Q13310 644 aaKnown RBP eCLIP17.01■□□□□ 0.31
NCK1-211ENST00000491539 Q3C1V9 767 aa17.01■□□□□ 0.31
NCK1-211ENST00000491539 FAM161BQ96MY7 647 aa17.01■□□□□ 0.31
NCK1-211ENST00000491539 FLRT1Q9NZU1 646 aa17.01■□□□□ 0.31
NCK1-211ENST00000491539 RBPJLQ9UBG7 517 aa17.01■□□□□ 0.31
NCK1-211ENST00000491539 ZNFX1Q9P2E3 1918 aaKnown RBP17.01■□□□□ 0.31
NCK1-211ENST00000491539 ZAP70P43403 619 aa17■□□□□ 0.31
NCK1-211ENST00000491539 BACE1P56817 501 aa17■□□□□ 0.31
NCK1-211ENST00000491539 PDE3AQ14432 1141 aa17■□□□□ 0.31
NCK1-211ENST00000491539 HSP90AB4PQ58FF6 505 aa17■□□□□ 0.31
NCK1-211ENST00000491539 C20orf194Q5TEA3 1177 aa17■□□□□ 0.31
NCK1-211ENST00000491539 GPR142Q7Z601 462 aa17■□□□□ 0.31
NCK1-211ENST00000491539 MAPKAPK5Q8IW41 473 aa17■□□□□ 0.31
NCK1-211ENST00000491539 PHF6Q8IWS0 365 aaKnown RBP eCLIP17■□□□□ 0.31
NCK1-211ENST00000491539 SOCS4Q8WXH5 440 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms