RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 ADGRA2Q96PE1 1338 aa16.43■□□□□ 0.22
CDK9-204ENST00000491521 POTEFA5A3E0 1075 aa16.42■□□□□ 0.22
CDK9-204ENST00000491521 HLA-DOAP06340 250 aa16.42■□□□□ 0.22
CDK9-204ENST00000491521 CTGFP29279 349 aa16.42■□□□□ 0.22
CDK9-204ENST00000491521 SHROOM1Q2M3G4 852 aaPredicted RBP16.42■□□□□ 0.22
CDK9-204ENST00000491521 TREML2Q5T2D2 321 aa16.42■□□□□ 0.22
CDK9-204ENST00000491521 SMCR8Q8TEV9 937 aaPredicted RBP16.42■□□□□ 0.22
CDK9-204ENST00000491521 SH3TC2Q8TF17 1288 aa16.42■□□□□ 0.22
CDK9-204ENST00000491521 EDC3Q96F86 508 aaKnown RBP16.42■□□□□ 0.22
CDK9-204ENST00000491521 TRIM47Q96LD4 638 aa16.42■□□□□ 0.22
CDK9-204ENST00000491521 USP17L5A8MUK1 530 aa16.41■□□□□ 0.22
CDK9-204ENST00000491521 HMGCS2P54868 508 aa16.41■□□□□ 0.22
CDK9-204ENST00000491521 TTF1Q15361 905 aaPredicted RBP16.41■□□□□ 0.22
CDK9-204ENST00000491521 SLC9C2Q5TAH2 1124 aa16.41■□□□□ 0.22
CDK9-204ENST00000491521 ZNF280CQ8ND82 737 aa16.41■□□□□ 0.22
CDK9-204ENST00000491521 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.41■□□□□ 0.22
CDK9-204ENST00000491521 ARMC5Q96C12 935 aa16.41■□□□□ 0.22
CDK9-204ENST00000491521 HAUS7Q99871 368 aa16.41■□□□□ 0.22
CDK9-204ENST00000491521 DNAJC18Q9H819 358 aa16.41■□□□□ 0.22
CDK9-204ENST00000491521 MAGEB6P1A0A0J9YX57 407 aa16.4■□□□□ 0.22
CDK9-204ENST00000491521 GSPT1P15170 499 aaKnown RBP16.4■□□□□ 0.22
CDK9-204ENST00000491521 PDE6AP16499 860 aa16.4■□□□□ 0.22
CDK9-204ENST00000491521 SDSP20132 328 aa16.4■□□□□ 0.22
CDK9-204ENST00000491521 JAG1P78504 1218 aa16.4■□□□□ 0.22
CDK9-204ENST00000491521 BMP2KLQ5H9B9 411 aa16.4■□□□□ 0.22
CDK9-204ENST00000491521 NBPF11Q86T75 865 aa16.4■□□□□ 0.22
CDK9-204ENST00000491521 AGTPBP1Q9UPW5 1226 aa16.4■□□□□ 0.22
CDK9-204ENST00000491521 BCRP11274 1271 aa16.39■□□□□ 0.21
CDK9-204ENST00000491521 OSBPP22059 807 aa16.39■□□□□ 0.21
CDK9-204ENST00000491521 MTMR2Q13614 643 aa16.39■□□□□ 0.21
CDK9-204ENST00000491521 FOXP4Q8IVH2 680 aaPredicted RBP16.39■□□□□ 0.21
CDK9-204ENST00000491521 RAET1EQ8TD07 263 aa16.39■□□□□ 0.21
CDK9-204ENST00000491521 ZNF333Q96JL9 665 aa16.39■□□□□ 0.21
CDK9-204ENST00000491521 TMEM106CQ9BVX2 250 aa16.39■□□□□ 0.21
CDK9-204ENST00000491521 AS3MTQ9HBK9 375 aa16.39■□□□□ 0.21
CDK9-204ENST00000491521 PAG1Q9NWQ8 432 aa16.39■□□□□ 0.21
CDK9-204ENST00000491521 MGAMO43451 1857 aa16.39■□□□□ 0.21
CDK9-204ENST00000491521 ZNF532Q9HCE3 1301 aa16.39■□□□□ 0.21
CDK9-204ENST00000491521 NAV1Q8NEY1 1877 aa16.38■□□□□ 0.21
CDK9-204ENST00000491521 IGSF3O75054 1194 aa16.38■□□□□ 0.21
CDK9-204ENST00000491521 EN2P19622 333 aaPredicted RBP16.38■□□□□ 0.21
CDK9-204ENST00000491521 HOXD10P28358 340 aa16.38■□□□□ 0.21
CDK9-204ENST00000491521 FCGRTP55899 365 aa16.38■□□□□ 0.21
CDK9-204ENST00000491521 SLFNL1Q499Z3 407 aa16.38■□□□□ 0.21
CDK9-204ENST00000491521 ANKRD13CQ8N6S4 541 aa16.38■□□□□ 0.21
CDK9-204ENST00000491521 EVI5LQ96CN4 794 aa16.38■□□□□ 0.21
CDK9-204ENST00000491521 SRRDQ9UH36 339 aa16.38■□□□□ 0.21
CDK9-204ENST00000491521 MYPNQ86TC9 1320 aa16.38■□□□□ 0.21
CDK9-204ENST00000491521 LOC285556D6RIA3 1793 aa16.38■□□□□ 0.21
CDK9-204ENST00000491521 GNRH1P01148 92 aa16.37■□□□□ 0.21
CDK9-204ENST00000491521 POLR3DP05423 398 aaPredicted RBP16.37■□□□□ 0.21
CDK9-204ENST00000491521 ASNSP08243 561 aa16.37■□□□□ 0.21
CDK9-204ENST00000491521 CERS3Q8IU89 383 aa16.37■□□□□ 0.21
CDK9-204ENST00000491521 PROCA1Q8NCQ7 364 aaPredicted RBP16.37■□□□□ 0.21
CDK9-204ENST00000491521 FSD1Q9BTV5 496 aa16.37■□□□□ 0.21
CDK9-204ENST00000491521 TMOD4Q9NZQ9 345 aa16.37■□□□□ 0.21
CDK9-204ENST00000491521 BIN2Q9UBW5 565 aaPredicted RBP16.37■□□□□ 0.21
CDK9-204ENST00000491521 PNMA3Q9UL41 463 aa16.37■□□□□ 0.21
CDK9-204ENST00000491521 ZBTB21Q9ULJ3 1066 aa16.37■□□□□ 0.21
CDK9-204ENST00000491521 SLC45A1Q9Y2W3 748 aa16.37■□□□□ 0.21
CDK9-204ENST00000491521 GH2P01242 217 aa16.36■□□□□ 0.21
CDK9-204ENST00000491521 PRKCZQ05513 592 aa16.36■□□□□ 0.21
CDK9-204ENST00000491521 LCORLQ8N3X6 602 aa16.36■□□□□ 0.21
CDK9-204ENST00000491521 RIOK1Q9BRS2 568 aaKnown RBP16.36■□□□□ 0.21
CDK9-204ENST00000491521 TBC1D2Q9BYX2 928 aa16.36■□□□□ 0.21
CDK9-204ENST00000491521 CRNKL1Q9BZJ0 848 aaKnown RBP16.36■□□□□ 0.21
CDK9-204ENST00000491521 TAOK2Q9UL54 1235 aa16.36■□□□□ 0.21
CDK9-204ENST00000491521 PLCD1P51178 756 aa16.35■□□□□ 0.21
CDK9-204ENST00000491521 PRMT2P55345 433 aa16.35■□□□□ 0.21
CDK9-204ENST00000491521 PABPC4Q13310 644 aaKnown RBP eCLIP16.35■□□□□ 0.21
CDK9-204ENST00000491521 ZYXQ15942 572 aaKnown RBP16.35■□□□□ 0.21
CDK9-204ENST00000491521 TTC6Q86TZ1 520 aa16.35■□□□□ 0.21
CDK9-204ENST00000491521 METTL16Q86W50 562 aaKnown RBP16.35■□□□□ 0.21
CDK9-204ENST00000491521 SDR42E1Q8WUS8 393 aa16.35■□□□□ 0.21
CDK9-204ENST00000491521 WDR18Q9BV38 432 aa16.35■□□□□ 0.21
CDK9-204ENST00000491521 ASCC2Q9H1I8 757 aaPredicted RBP16.35■□□□□ 0.21
CDK9-204ENST00000491521 ARMT1Q9H993 441 aa16.35■□□□□ 0.21
CDK9-204ENST00000491521 MCM9Q9NXL9 1143 aa16.35■□□□□ 0.21
CDK9-204ENST00000491521 SERPINB13Q9UIV8 391 aa16.35■□□□□ 0.21
CDK9-204ENST00000491521 GABRQQ9UN88 632 aa16.35■□□□□ 0.21
CDK9-204ENST00000491521 RBBP6Q7Z6E9 1792 aaKnown RBP16.35■□□□□ 0.21
CDK9-204ENST00000491521 TCRBV5S4A2TA0A5A2 114 aa16.34■□□□□ 0.21
CDK9-204ENST00000491521 TNPO2O14787 897 aaKnown RBP16.34■□□□□ 0.21
CDK9-204ENST00000491521 MBD4O95243 580 aa16.34■□□□□ 0.21
CDK9-204ENST00000491521 CHGBP05060 677 aa16.34■□□□□ 0.21
CDK9-204ENST00000491521 BACE1P56817 501 aa16.34■□□□□ 0.21
CDK9-204ENST00000491521 IRX3P78415 501 aaPredicted RBP16.34■□□□□ 0.21
CDK9-204ENST00000491521 EVX2Q03828 476 aa16.34■□□□□ 0.21
CDK9-204ENST00000491521 RAB3GAP1Q15042 981 aa16.34■□□□□ 0.21
CDK9-204ENST00000491521 LRRFIP1Q32MZ4 808 aaKnown RBP16.34■□□□□ 0.21
CDK9-204ENST00000491521 CASC1Q6TDU7 716 aa16.34■□□□□ 0.21
CDK9-204ENST00000491521 KBTBD3Q8NAB2 608 aa16.34■□□□□ 0.21
CDK9-204ENST00000491521 FEZ1Q99689 392 aa16.34■□□□□ 0.21
CDK9-204ENST00000491521 MYH7P12883 1935 aa16.33■□□□□ 0.21
CDK9-204ENST00000491521 USP17L10C9JJH3 530 aa16.33■□□□□ 0.2
CDK9-204ENST00000491521 CDC45O75419 566 aa16.33■□□□□ 0.2
CDK9-204ENST00000491521 CYP2D6P10635 497 aa16.33■□□□□ 0.2
CDK9-204ENST00000491521 GRK4P32298 578 aa16.33■□□□□ 0.2
CDK9-204ENST00000491521 MTFR1Q15390 333 aa16.33■□□□□ 0.2
CDK9-204ENST00000491521 CERKLQ49MI3 558 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms