RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 MROH7-TTC4A0A0A0MT08 1334 aa13.82□□□□□ -0.2
CLCNKA-206ENST00000491433 COL6A1P12109 1028 aa13.81□□□□□ -0.2
CLCNKA-206ENST00000491433 ZKSCAN1P17029 563 aaPredicted RBP13.81□□□□□ -0.2
CLCNKA-206ENST00000491433 CYP2B6P20813 491 aa13.81□□□□□ -0.2
CLCNKA-206ENST00000491433 CAP2P40123 477 aa13.81□□□□□ -0.2
CLCNKA-206ENST00000491433 IL15P40933 162 aaPredicted RBP13.81□□□□□ -0.2
CLCNKA-206ENST00000491433 GSTO1P78417 241 aa13.81□□□□□ -0.2
CLCNKA-206ENST00000491433 CCDC184Q52MB2 194 aa13.81□□□□□ -0.2
CLCNKA-206ENST00000491433 MRS2Q9HD23 443 aa13.81□□□□□ -0.2
CLCNKA-206ENST00000491433 DDX4Q9NQI0 724 aaKnown RBP13.81□□□□□ -0.2
CLCNKA-206ENST00000491433 HERC5Q9UII4 1024 aaKnown RBP13.81□□□□□ -0.2
CLCNKA-206ENST00000491433 GPR75-ASB3A0A0A6YYF3 556 aa13.8□□□□□ -0.2
CLCNKA-206ENST00000491433 HOXA7P31268 230 aaPredicted RBP13.8□□□□□ -0.2
CLCNKA-206ENST00000491433 RGS2P41220 211 aa13.8□□□□□ -0.2
CLCNKA-206ENST00000491433 PHKA1P46020 1223 aa13.8□□□□□ -0.2
CLCNKA-206ENST00000491433 TRIM32Q13049 653 aa13.8□□□□□ -0.2
CLCNKA-206ENST00000491433 C9orf50Q5SZB4 431 aa13.8□□□□□ -0.2
CLCNKA-206ENST00000491433 CCDC102BQ68D86 513 aa13.8□□□□□ -0.2
CLCNKA-206ENST00000491433 POTEEQ6S8J3 1075 aa13.8□□□□□ -0.2
CLCNKA-206ENST00000491433 ERICH6Q7L0X2 663 aa13.8□□□□□ -0.2
CLCNKA-206ENST00000491433 MIER1Q8N108 512 aa13.8□□□□□ -0.2
CLCNKA-206ENST00000491433 MRPL50Q8N5N7 158 aaKnown RBP13.8□□□□□ -0.2
CLCNKA-206ENST00000491433 GPRC5AQ8NFJ5 357 aa13.8□□□□□ -0.2
CLCNKA-206ENST00000491433 TSPYL2Q9H2G4 693 aaPredicted RBP13.8□□□□□ -0.2
CLCNKA-206ENST00000491433 GINM1Q9NU53 330 aa13.8□□□□□ -0.2
CLCNKA-206ENST00000491433 CACNA1GO43497 2377 aa13.8□□□□□ -0.2
CLCNKA-206ENST00000491433 FAM86C2PA6NEL3 165 aa13.79□□□□□ -0.2
CLCNKA-206ENST00000491433 C19orf81C9J6K1 198 aa13.79□□□□□ -0.2
CLCNKA-206ENST00000491433 SMIM22K7EJ46 135 aa13.79□□□□□ -0.2
CLCNKA-206ENST00000491433 ASNSP08243 561 aa13.79□□□□□ -0.2
CLCNKA-206ENST00000491433 AAK1Q2M2I8 961 aa13.79□□□□□ -0.2
CLCNKA-206ENST00000491433 CCDC84Q86UT8 332 aaPredicted RBP13.79□□□□□ -0.2
CLCNKA-206ENST00000491433 WDR18Q9BV38 432 aa13.79□□□□□ -0.2
CLCNKA-206ENST00000491433 SIL1Q9H173 461 aa13.79□□□□□ -0.2
CLCNKA-206ENST00000491433 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.79□□□□□ -0.2
CLCNKA-206ENST00000491433 AKAP2Q9Y2D5 859 aa13.79□□□□□ -0.2
CLCNKA-206ENST00000491433 MSCO60682 206 aa13.78□□□□□ -0.2
CLCNKA-206ENST00000491433 GLRX3O76003 335 aaKnown RBP13.78□□□□□ -0.2
CLCNKA-206ENST00000491433 UBTFL1P0CB47 393 aaPredicted RBP13.78□□□□□ -0.2
CLCNKA-206ENST00000491433 BMP1P13497 986 aa13.78□□□□□ -0.2
CLCNKA-206ENST00000491433 BACE1P56817 501 aa13.78□□□□□ -0.2
CLCNKA-206ENST00000491433 CACNB2Q08289 660 aaPredicted RBP13.78□□□□□ -0.2
CLCNKA-206ENST00000491433 MVPQ14764 893 aaKnown RBP13.78□□□□□ -0.2
CLCNKA-206ENST00000491433 APBA2Q99767 749 aa13.78□□□□□ -0.2
CLCNKA-206ENST00000491433 NOL10Q9BSC4 688 aaKnown RBP13.78□□□□□ -0.2
CLCNKA-206ENST00000491433 DHX36Q9H2U1 1008 aaKnown RBP13.78□□□□□ -0.2
CLCNKA-206ENST00000491433 CWC22Q9HCG8 908 aaKnown RBP13.78□□□□□ -0.2
CLCNKA-206ENST00000491433 C11orf16Q9NQ32 467 aa13.78□□□□□ -0.2
CLCNKA-206ENST00000491433 ZDBF2Q9HCK1 2354 aa13.78□□□□□ -0.2
CLCNKA-206ENST00000491433 ST18O60284 1047 aa13.77□□□□□ -0.21
CLCNKA-206ENST00000491433 RHBDL3P58872 404 aa13.77□□□□□ -0.21
CLCNKA-206ENST00000491433 HERVK_113P62684 666 aa13.77□□□□□ -0.21
CLCNKA-206ENST00000491433 RASGRF1Q13972 1273 aa13.77□□□□□ -0.21
CLCNKA-206ENST00000491433 CXXC1Q9P0U4 656 aaPredicted RBP13.77□□□□□ -0.21
CLCNKA-206ENST00000491433 PI4KBQ9UBF8 816 aa13.77□□□□□ -0.21
CLCNKA-206ENST00000491433 USP17L10C9JJH3 530 aa13.76□□□□□ -0.21
CLCNKA-206ENST00000491433 ERVK-9P63128 1117 aa13.76□□□□□ -0.21
CLCNKA-206ENST00000491433 ERVK-24P63145 666 aa13.76□□□□□ -0.21
CLCNKA-206ENST00000491433 CCNA1P78396 465 aa13.76□□□□□ -0.21
CLCNKA-206ENST00000491433 MECOMQ03112 1051 aa13.76□□□□□ -0.21
CLCNKA-206ENST00000491433 MTMR2Q13614 643 aa13.76□□□□□ -0.21
CLCNKA-206ENST00000491433 MFSD14CQ5VZR4 134 aa13.76□□□□□ -0.21
CLCNKA-206ENST00000491433 LHX8Q68G74 356 aa13.76□□□□□ -0.21
CLCNKA-206ENST00000491433 GPR142Q7Z601 462 aa13.76□□□□□ -0.21
CLCNKA-206ENST00000491433 PLEKHH3Q7Z736 793 aa13.76□□□□□ -0.21
CLCNKA-206ENST00000491433 TRIM34Q9BYJ4 488 aa13.76□□□□□ -0.21
CLCNKA-206ENST00000491433 ZNF576Q9H609 170 aa13.76□□□□□ -0.21
CLCNKA-206ENST00000491433 FRMPD3Q5JV73 1810 aa13.76□□□□□ -0.21
CLCNKA-206ENST00000491433 MAST2Q6P0Q8 1798 aa13.76□□□□□ -0.21
CLCNKA-206ENST00000491433 FAM196BA6NMK8 535 aa13.75□□□□□ -0.21
CLCNKA-206ENST00000491433 SLURP2P0DP57 97 aa13.75□□□□□ -0.21
CLCNKA-206ENST00000491433 CCDC85BQ15834 202 aaPredicted RBP13.75□□□□□ -0.21
CLCNKA-206ENST00000491433 MORN1Q5T089 497 aa13.75□□□□□ -0.21
CLCNKA-206ENST00000491433 USP6NLQ92738 828 aa13.75□□□□□ -0.21
CLCNKA-206ENST00000491433 SENP6Q9GZR1 1112 aaPredicted RBP13.75□□□□□ -0.21
CLCNKA-206ENST00000491433 KCNH6Q9H252 994 aa13.75□□□□□ -0.21
CLCNKA-206ENST00000491433 COPRSQ9NQ92 184 aa13.75□□□□□ -0.21
CLCNKA-206ENST00000491433 PRR33A8MZF0 331 aa13.74□□□□□ -0.21
CLCNKA-206ENST00000491433 BAG3O95817 575 aa13.74□□□□□ -0.21
CLCNKA-206ENST00000491433 PLCG2P16885 1265 aa13.74□□□□□ -0.21
CLCNKA-206ENST00000491433 DNAJB2P25686 324 aa13.74□□□□□ -0.21
CLCNKA-206ENST00000491433 CCND3P30281 292 aaPredicted RBP13.74□□□□□ -0.21
CLCNKA-206ENST00000491433 ADORA1P30542 326 aa13.74□□□□□ -0.21
CLCNKA-206ENST00000491433 FOXP4Q8IVH2 680 aaPredicted RBP13.74□□□□□ -0.21
CLCNKA-206ENST00000491433 TEX11Q8IYF3 940 aa13.74□□□□□ -0.21
CLCNKA-206ENST00000491433 RBPJLQ9UBG7 517 aa13.74□□□□□ -0.21
CLCNKA-206ENST00000491433 A0A1B0GUL7 405 aa13.73□□□□□ -0.21
CLCNKA-206ENST00000491433 TIMM10P62072 90 aa13.73□□□□□ -0.21
CLCNKA-206ENST00000491433 MAP2K5Q13163 448 aa13.73□□□□□ -0.21
CLCNKA-206ENST00000491433 ALDH1L2Q3SY69 923 aa13.73□□□□□ -0.21
CLCNKA-206ENST00000491433 GORABQ5T7V8 394 aa13.73□□□□□ -0.21
CLCNKA-206ENST00000491433 ATF7IPQ6VMQ6 1270 aa13.73□□□□□ -0.21
CLCNKA-206ENST00000491433 CRACR2BQ8N4Y2 399 aaPredicted RBP13.73□□□□□ -0.21
CLCNKA-206ENST00000491433 LPAR1Q92633 364 aa13.73□□□□□ -0.21
CLCNKA-206ENST00000491433 NSUN4Q96CB9 384 aaKnown RBP13.73□□□□□ -0.21
CLCNKA-206ENST00000491433 EDC3Q96F86 508 aaKnown RBP13.73□□□□□ -0.21
CLCNKA-206ENST00000491433 XAGE2Q96GT9 111 aa13.73□□□□□ -0.21
CLCNKA-206ENST00000491433 RNPC3Q96LT9 517 aaKnown RBP13.73□□□□□ -0.21
CLCNKA-206ENST00000491433 TXNRD2Q9NNW7 524 aa13.73□□□□□ -0.21
CLCNKA-206ENST00000491433 RABGAP1Q9Y3P9 1069 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms