RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 NBPF3Q9H094 633 aa10.38□□□□□ -0.75
APOBEC3F-204ENST00000491387 C1orf115Q9H7X2 142 aa10.38□□□□□ -0.75
APOBEC3F-204ENST00000491387 DNAJC18Q9H819 358 aa10.38□□□□□ -0.75
APOBEC3F-204ENST00000491387 HMX1Q9NP08 348 aaPredicted RBP10.38□□□□□ -0.75
APOBEC3F-204ENST00000491387 OGDHLQ9ULD0 1010 aa10.38□□□□□ -0.75
APOBEC3F-204ENST00000491387 NAV1Q8NEY1 1877 aa10.38□□□□□ -0.75
APOBEC3F-204ENST00000491387 LAMA3Q16787 3333 aa10.37□□□□□ -0.75
APOBEC3F-204ENST00000491387 RLBP1P12271 317 aa10.37□□□□□ -0.75
APOBEC3F-204ENST00000491387 JAG1P78504 1218 aa10.37□□□□□ -0.75
APOBEC3F-204ENST00000491387 TNNI3KQ59H18 835 aa10.37□□□□□ -0.75
APOBEC3F-204ENST00000491387 NAA16Q6N069 864 aaPredicted RBP10.37□□□□□ -0.75
APOBEC3F-204ENST00000491387 CERS3Q8IU89 383 aa10.37□□□□□ -0.75
APOBEC3F-204ENST00000491387 TRMT44Q8IYL2 757 aaKnown RBP10.37□□□□□ -0.75
APOBEC3F-204ENST00000491387 TMEM57Q8N5G2 664 aa10.37□□□□□ -0.75
APOBEC3F-204ENST00000491387 GPRC5AQ8NFJ5 357 aa10.37□□□□□ -0.75
APOBEC3F-204ENST00000491387 DIS3LQ8TF46 1054 aaKnown RBP10.37□□□□□ -0.75
APOBEC3F-204ENST00000491387 SOCS4Q8WXH5 440 aa10.37□□□□□ -0.75
APOBEC3F-204ENST00000491387 TRIB2Q92519 343 aa10.37□□□□□ -0.75
APOBEC3F-204ENST00000491387 P2RX7Q99572 595 aaKnown RBP10.37□□□□□ -0.75
APOBEC3F-204ENST00000491387 NOL10Q9BSC4 688 aaKnown RBP10.37□□□□□ -0.75
APOBEC3F-204ENST00000491387 RBPJLQ9UBG7 517 aa10.37□□□□□ -0.75
APOBEC3F-204ENST00000491387 NOP58Q9Y2X3 529 aaKnown RBP10.37□□□□□ -0.75
APOBEC3F-204ENST00000491387 FPGT-TNNI3KV9GXZ4 949 aa10.37□□□□□ -0.75
APOBEC3F-204ENST00000491387 BAZ2AQ9UIF9 1905 aaKnown RBP10.37□□□□□ -0.75
APOBEC3F-204ENST00000491387 FLT1P17948 1338 aa10.36□□□□□ -0.75
APOBEC3F-204ENST00000491387 USP17L10C9JJH3 530 aa10.36□□□□□ -0.75
APOBEC3F-204ENST00000491387 CYP2E1P05181 493 aaPredicted RBP10.36□□□□□ -0.75
APOBEC3F-204ENST00000491387 MAPK4P31152 587 aa10.36□□□□□ -0.75
APOBEC3F-204ENST00000491387 HERVK_113P62684 666 aa10.36□□□□□ -0.75
APOBEC3F-204ENST00000491387 IRX3P78415 501 aaPredicted RBP10.36□□□□□ -0.75
APOBEC3F-204ENST00000491387 ATP8B2P98198 1209 aa10.36□□□□□ -0.75
APOBEC3F-204ENST00000491387 MTMR2Q13614 643 aa10.36□□□□□ -0.75
APOBEC3F-204ENST00000491387 CCDC158Q5M9N0 1113 aa10.36□□□□□ -0.75
APOBEC3F-204ENST00000491387 ADGRA1Q86SQ6 560 aa10.36□□□□□ -0.75
APOBEC3F-204ENST00000491387 C12orf42Q96LP6 360 aa10.36□□□□□ -0.75
APOBEC3F-204ENST00000491387 NUDT12Q9BQG2 462 aa10.36□□□□□ -0.75
APOBEC3F-204ENST00000491387 TXNRD2Q9NNW7 524 aa10.36□□□□□ -0.75
APOBEC3F-204ENST00000491387 AATFQ9NY61 560 aaKnown RBP eCLIP10.36□□□□□ -0.75
APOBEC3F-204ENST00000491387 TMOD4Q9NZQ9 345 aa10.36□□□□□ -0.75
APOBEC3F-204ENST00000491387 STAP2Q9UGK3 403 aa10.36□□□□□ -0.75
APOBEC3F-204ENST00000491387 SOX1O00570 391 aaPredicted RBP10.35□□□□□ -0.75
APOBEC3F-204ENST00000491387 COL6A1P12109 1028 aa10.35□□□□□ -0.75
APOBEC3F-204ENST00000491387 TRIM32Q13049 653 aa10.35□□□□□ -0.75
APOBEC3F-204ENST00000491387 LRIT3Q3SXY7 679 aa10.35□□□□□ -0.75
APOBEC3F-204ENST00000491387 MORN1Q5T089 497 aa10.35□□□□□ -0.75
APOBEC3F-204ENST00000491387 TATDN1Q6P1N9 297 aa10.35□□□□□ -0.75
APOBEC3F-204ENST00000491387 POTEEQ6S8J3 1075 aa10.35□□□□□ -0.75
APOBEC3F-204ENST00000491387 TGFBRAP1Q8WUH2 860 aa10.35□□□□□ -0.75
APOBEC3F-204ENST00000491387 DBNDD2Q9BQY9 259 aa10.35□□□□□ -0.75
APOBEC3F-204ENST00000491387 EHD4Q9H223 541 aa10.35□□□□□ -0.75
APOBEC3F-204ENST00000491387 C11orf49Q9H6J7 331 aa10.35□□□□□ -0.75
APOBEC3F-204ENST00000491387 EMILIN3Q9NT22 766 aa10.35□□□□□ -0.75
APOBEC3F-204ENST00000491387 TAOK2Q9UL54 1235 aa10.35□□□□□ -0.75
APOBEC3F-204ENST00000491387 PALD1Q9ULE6 856 aa10.35□□□□□ -0.75
APOBEC3F-204ENST00000491387 ZBTB21Q9ULJ3 1066 aa10.35□□□□□ -0.75
APOBEC3F-204ENST00000491387 DDX60LQ5H9U9 1706 aaKnown RBP10.35□□□□□ -0.75
APOBEC3F-204ENST00000491387 A0A0C4DFX4 3053 aa10.34□□□□□ -0.75
APOBEC3F-204ENST00000491387 PRKAR2AP13861 404 aaKnown RBP10.34□□□□□ -0.75
APOBEC3F-204ENST00000491387 ERVK-9P63128 1117 aa10.34□□□□□ -0.75
APOBEC3F-204ENST00000491387 ERVK-24P63145 666 aa10.34□□□□□ -0.75
APOBEC3F-204ENST00000491387 Q3C1V9 767 aa10.34□□□□□ -0.75
APOBEC3F-204ENST00000491387 TTC39AQ5SRH9 613 aa10.34□□□□□ -0.75
APOBEC3F-204ENST00000491387 ZKSCAN2Q63HK3 967 aa10.34□□□□□ -0.75
APOBEC3F-204ENST00000491387 USP17L2Q6R6M4 530 aa10.34□□□□□ -0.75
APOBEC3F-204ENST00000491387 LBX2Q6XYB7 198 aa10.34□□□□□ -0.75
APOBEC3F-204ENST00000491387 MAPKAPK5Q8IW41 473 aa10.34□□□□□ -0.75
APOBEC3F-204ENST00000491387 SNRKQ9NRH2 765 aa10.34□□□□□ -0.75
APOBEC3F-204ENST00000491387 HLA-DOAP06340 250 aa10.33□□□□□ -0.76
APOBEC3F-204ENST00000491387 CYP2B6P20813 491 aa10.33□□□□□ -0.76
APOBEC3F-204ENST00000491387 RGS2P41220 211 aa10.33□□□□□ -0.76
APOBEC3F-204ENST00000491387 ZAP70P43403 619 aa10.33□□□□□ -0.76
APOBEC3F-204ENST00000491387 CACNB2Q08289 660 aaPredicted RBP10.33□□□□□ -0.76
APOBEC3F-204ENST00000491387 PDE3AQ14432 1141 aa10.33□□□□□ -0.76
APOBEC3F-204ENST00000491387 SHROOM1Q2M3G4 852 aaPredicted RBP10.33□□□□□ -0.76
APOBEC3F-204ENST00000491387 LHX8Q68G74 356 aa10.33□□□□□ -0.76
APOBEC3F-204ENST00000491387 GPR142Q7Z601 462 aa10.33□□□□□ -0.76
APOBEC3F-204ENST00000491387 CRACR2BQ8N4Y2 399 aaPredicted RBP10.33□□□□□ -0.76
APOBEC3F-204ENST00000491387 LRCH3Q96II8 777 aa10.33□□□□□ -0.76
APOBEC3F-204ENST00000491387 APBA2Q99767 749 aa10.33□□□□□ -0.76
APOBEC3F-204ENST00000491387 PIH1D3Q9NQM4 214 aaKnown RBP10.33□□□□□ -0.76
APOBEC3F-204ENST00000491387 DBNLQ9UJU6 430 aaKnown RBP10.33□□□□□ -0.76
APOBEC3F-204ENST00000491387 RABGAP1Q9Y3P9 1069 aa10.33□□□□□ -0.76
APOBEC3F-204ENST00000491387 PFASO15067 1338 aa10.33□□□□□ -0.76
APOBEC3F-204ENST00000491387 ZBED9Q6R2W3 1325 aa10.33□□□□□ -0.76
APOBEC3F-204ENST00000491387 COL6A3P12111 3177 aa10.32□□□□□ -0.76
APOBEC3F-204ENST00000491387 USP17L15C9J2P7 530 aa10.32□□□□□ -0.76
APOBEC3F-204ENST00000491387 USP17L13C9JLJ4 530 aa10.32□□□□□ -0.76
APOBEC3F-204ENST00000491387 USP17L11C9JVI0 530 aa10.32□□□□□ -0.76
APOBEC3F-204ENST00000491387 USP17L18D6R9N7 530 aa10.32□□□□□ -0.76
APOBEC3F-204ENST00000491387 USP17L22D6RA61 530 aa10.32□□□□□ -0.76
APOBEC3F-204ENST00000491387 USP17L17D6RBQ6 530 aa10.32□□□□□ -0.76
APOBEC3F-204ENST00000491387 USP17L19D6RCP7 530 aa10.32□□□□□ -0.76
APOBEC3F-204ENST00000491387 USP17L20D6RJB6 530 aa10.32□□□□□ -0.76
APOBEC3F-204ENST00000491387 SURF6O75683 361 aaKnown RBP10.32□□□□□ -0.76
APOBEC3F-204ENST00000491387 GDF11O95390 407 aa10.32□□□□□ -0.76
APOBEC3F-204ENST00000491387 IGHA2P01877 340 aa10.32□□□□□ -0.76
APOBEC3F-204ENST00000491387 HOXC6P09630 235 aa10.32□□□□□ -0.76
APOBEC3F-204ENST00000491387 ZKSCAN1P17029 563 aaPredicted RBP10.32□□□□□ -0.76
APOBEC3F-204ENST00000491387 USP17L24Q0WX57 530 aa10.32□□□□□ -0.76
APOBEC3F-204ENST00000491387 PLEKHH3Q7Z736 793 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms