RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 USP14P54578 494 aa19.99■□□□□ 0.79
PDLIM2-217ENST00000491330 MTMR2Q13614 643 aa19.99■□□□□ 0.79
PDLIM2-217ENST00000491330 AAMPQ13685 434 aa19.99■□□□□ 0.79
PDLIM2-217ENST00000491330 FAM110CQ1W6H9 321 aa19.99■□□□□ 0.79
PDLIM2-217ENST00000491330 CCDC84Q86UT8 332 aaPredicted RBP19.99■□□□□ 0.79
PDLIM2-217ENST00000491330 SLAIN1Q8ND83 568 aa19.99■□□□□ 0.79
PDLIM2-217ENST00000491330 ZBTB21Q9ULJ3 1066 aa19.99■□□□□ 0.79
PDLIM2-217ENST00000491330 GDF11O95390 407 aa19.98■□□□□ 0.79
PDLIM2-217ENST00000491330 SLURP2P0DP57 97 aa19.98■□□□□ 0.79
PDLIM2-217ENST00000491330 ABCB5Q2M3G0 1257 aa19.98■□□□□ 0.79
PDLIM2-217ENST00000491330 C20orf194Q5TEA3 1177 aa19.98■□□□□ 0.79
PDLIM2-217ENST00000491330 USP17L2Q6R6M4 530 aa19.98■□□□□ 0.79
PDLIM2-217ENST00000491330 ANKRD13CQ8N6S4 541 aa19.98■□□□□ 0.79
PDLIM2-217ENST00000491330 HAUS7Q99871 368 aa19.98■□□□□ 0.79
PDLIM2-217ENST00000491330 CWC22Q9HCG8 908 aaKnown RBP19.98■□□□□ 0.79
PDLIM2-217ENST00000491330 ECHDC1Q9NTX5 307 aa19.98■□□□□ 0.79
PDLIM2-217ENST00000491330 ADGRA2Q96PE1 1338 aa19.98■□□□□ 0.79
PDLIM2-217ENST00000491330 CAPN2P17655 700 aa19.97■□□□□ 0.79
PDLIM2-217ENST00000491330 RAB3GAP1Q15042 981 aa19.97■□□□□ 0.79
PDLIM2-217ENST00000491330 TREML2Q5T2D2 321 aa19.97■□□□□ 0.79
PDLIM2-217ENST00000491330 SH3TC2Q8TF17 1288 aa19.97■□□□□ 0.79
PDLIM2-217ENST00000491330 ATP8A2Q9NTI2 1148 aa19.97■□□□□ 0.79
PDLIM2-217ENST00000491330 MAST2Q6P0Q8 1798 aa19.97■□□□□ 0.79
PDLIM2-217ENST00000491330 MYCP01106 439 aaPredicted RBP19.96■□□□□ 0.79
PDLIM2-217ENST00000491330 GH2P01242 217 aa19.96■□□□□ 0.79
PDLIM2-217ENST00000491330 RRP1P56182 461 aaKnown RBP19.96■□□□□ 0.79
PDLIM2-217ENST00000491330 TATDN1Q6P1N9 297 aa19.96■□□□□ 0.79
PDLIM2-217ENST00000491330 RIOK1Q9BRS2 568 aaKnown RBP19.96■□□□□ 0.79
PDLIM2-217ENST00000491330 ASCC2Q9H1I8 757 aaPredicted RBP19.96■□□□□ 0.79
PDLIM2-217ENST00000491330 DCTPP1Q9H773 170 aa19.96■□□□□ 0.79
PDLIM2-217ENST00000491330 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.96■□□□□ 0.79
PDLIM2-217ENST00000491330 SWAP70Q9UH65 585 aa19.96■□□□□ 0.79
PDLIM2-217ENST00000491330 MPHOSPH10O00566 681 aaKnown RBP19.95■□□□□ 0.78
PDLIM2-217ENST00000491330 ERC2O15083 957 aa19.95■□□□□ 0.78
PDLIM2-217ENST00000491330 HOXA7P31268 230 aaPredicted RBP19.95■□□□□ 0.78
PDLIM2-217ENST00000491330 UBE3CQ15386 1083 aa19.95■□□□□ 0.78
PDLIM2-217ENST00000491330 PRPF38BQ5VTL8 546 aaKnown RBP19.95■□□□□ 0.78
PDLIM2-217ENST00000491330 ADCY3O60266 1144 aa19.94■□□□□ 0.78
PDLIM2-217ENST00000491330 ADD2P35612 726 aa19.94■□□□□ 0.78
PDLIM2-217ENST00000491330 PRKCZQ05513 592 aa19.94■□□□□ 0.78
PDLIM2-217ENST00000491330 PXYLP1Q8TE99 480 aa19.94■□□□□ 0.78
PDLIM2-217ENST00000491330 DOCK1Q14185 1865 aa19.93■□□□□ 0.78
PDLIM2-217ENST00000491330 POTEFA5A3E0 1075 aa19.93■□□□□ 0.78
PDLIM2-217ENST00000491330 FLT3LGP49771 235 aa19.93■□□□□ 0.78
PDLIM2-217ENST00000491330 CCNA1P78396 465 aa19.93■□□□□ 0.78
PDLIM2-217ENST00000491330 IRF5Q13568 498 aa19.93■□□□□ 0.78
PDLIM2-217ENST00000491330 GPRC5AQ8NFJ5 357 aa19.93■□□□□ 0.78
PDLIM2-217ENST00000491330 YTHDC1Q96MU7 727 aaKnown RBP19.93■□□□□ 0.78
PDLIM2-217ENST00000491330 SH2D4AQ9H788 454 aa19.93■□□□□ 0.78
PDLIM2-217ENST00000491330 DNAJC18Q9H819 358 aa19.93■□□□□ 0.78
PDLIM2-217ENST00000491330 USP17L15C9J2P7 530 aa19.92■□□□□ 0.78
PDLIM2-217ENST00000491330 USP17L13C9JLJ4 530 aa19.92■□□□□ 0.78
PDLIM2-217ENST00000491330 USP17L11C9JVI0 530 aa19.92■□□□□ 0.78
PDLIM2-217ENST00000491330 USP17L18D6R9N7 530 aa19.92■□□□□ 0.78
PDLIM2-217ENST00000491330 USP17L22D6RA61 530 aa19.92■□□□□ 0.78
PDLIM2-217ENST00000491330 USP17L17D6RBQ6 530 aa19.92■□□□□ 0.78
PDLIM2-217ENST00000491330 USP17L19D6RCP7 530 aa19.92■□□□□ 0.78
PDLIM2-217ENST00000491330 USP17L20D6RJB6 530 aa19.92■□□□□ 0.78
PDLIM2-217ENST00000491330 GLRX3O76003 335 aaKnown RBP19.92■□□□□ 0.78
PDLIM2-217ENST00000491330 MBD4O95243 580 aa19.92■□□□□ 0.78
PDLIM2-217ENST00000491330 ZFYP08048 801 aaPredicted RBP19.92■□□□□ 0.78
PDLIM2-217ENST00000491330 EN2P19622 333 aaPredicted RBP19.92■□□□□ 0.78
PDLIM2-217ENST00000491330 USP17L24Q0WX57 530 aa19.92■□□□□ 0.78
PDLIM2-217ENST00000491330 RRP1BQ14684 758 aaKnown RBP19.92■□□□□ 0.78
PDLIM2-217ENST00000491330 GCC1Q96CN9 775 aa19.92■□□□□ 0.78
PDLIM2-217ENST00000491330 RNF208Q9H0X6 261 aa19.92■□□□□ 0.78
PDLIM2-217ENST00000491330 ARMT1Q9H993 441 aa19.92■□□□□ 0.78
PDLIM2-217ENST00000491330 DCP1AQ9NPI6 582 aaPredicted RBP19.92■□□□□ 0.78
PDLIM2-217ENST00000491330 SMARCA5O60264 1052 aaPredicted RBP19.91■□□□□ 0.78
PDLIM2-217ENST00000491330 MAPK4P31152 587 aa19.91■□□□□ 0.78
PDLIM2-217ENST00000491330 PLCD1P51178 756 aa19.91■□□□□ 0.78
PDLIM2-217ENST00000491330 CAP1Q01518 475 aa19.91■□□□□ 0.78
PDLIM2-217ENST00000491330 LCORLQ8N3X6 602 aa19.91■□□□□ 0.78
PDLIM2-217ENST00000491330 SDR42E1Q8WUS8 393 aa19.91■□□□□ 0.78
PDLIM2-217ENST00000491330 CCDC17Q96LX7 622 aa19.91■□□□□ 0.78
PDLIM2-217ENST00000491330 SLC4A4Q9Y6R1 1079 aa19.91■□□□□ 0.78
PDLIM2-217ENST00000491330 TCRBV5S4A2TA0A5A2 114 aa19.9■□□□□ 0.78
PDLIM2-217ENST00000491330 HERVK_113P62684 666 aa19.9■□□□□ 0.78
PDLIM2-217ENST00000491330 ZYXQ15942 572 aaKnown RBP19.9■□□□□ 0.78
PDLIM2-217ENST00000491330 TMEM179Q6ZVK1 233 aa19.9■□□□□ 0.78
PDLIM2-217ENST00000491330 EDC3Q96F86 508 aaKnown RBP19.9■□□□□ 0.78
PDLIM2-217ENST00000491330 KIAA1683Q9H0B3 1180 aa19.9■□□□□ 0.78
PDLIM2-217ENST00000491330 ZNF287Q9HBT7 754 aa19.9■□□□□ 0.78
PDLIM2-217ENST00000491330 ARHGEF10LQ9HCE6 1279 aa19.9■□□□□ 0.78
PDLIM2-217ENST00000491330 MORF4L1Q9UBU8 362 aa19.9■□□□□ 0.78
PDLIM2-217ENST00000491330 GJB1P08034 283 aa19.89■□□□□ 0.77
PDLIM2-217ENST00000491330 CCL5P13501 91 aa19.89■□□□□ 0.77
PDLIM2-217ENST00000491330 GNAT2P19087 354 aa19.89■□□□□ 0.77
PDLIM2-217ENST00000491330 CTGFP29279 349 aa19.89■□□□□ 0.77
PDLIM2-217ENST00000491330 TRMT44Q8IYL2 757 aaKnown RBP19.89■□□□□ 0.77
PDLIM2-217ENST00000491330 C12orf42Q96LP6 360 aa19.89■□□□□ 0.77
PDLIM2-217ENST00000491330 P2RX7Q99572 595 aaKnown RBP19.89■□□□□ 0.77
PDLIM2-217ENST00000491330 TTC41PQ6P2S7 1318 aa19.88■□□□□ 0.77
PDLIM2-217ENST00000491330 KBTBD3Q8NAB2 608 aa19.88■□□□□ 0.77
PDLIM2-217ENST00000491330 SOCS4Q8WXH5 440 aa19.88■□□□□ 0.77
PDLIM2-217ENST00000491330 NUDT12Q9BQG2 462 aa19.88■□□□□ 0.77
PDLIM2-217ENST00000491330 GABRQQ9UN88 632 aa19.88■□□□□ 0.77
PDLIM2-217ENST00000491330 SHMT1P34896 483 aa19.87■□□□□ 0.77
PDLIM2-217ENST00000491330 PAGR1Q9BTK6 254 aa19.87■□□□□ 0.77
PDLIM2-217ENST00000491330 HTATIP2Q9BUP3 242 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms