RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 GSTO1P78417 241 aa18.93■□□□□ 0.62
SCAMP3-208ENST00000490999 ALDH1L2Q3SY69 923 aa18.92■□□□□ 0.62
SCAMP3-208ENST00000490999 LHX8Q68G74 356 aa18.92■□□□□ 0.62
SCAMP3-208ENST00000490999 POTEEQ6S8J3 1075 aa18.92■□□□□ 0.62
SCAMP3-208ENST00000490999 GPR142Q7Z601 462 aa18.92■□□□□ 0.62
SCAMP3-208ENST00000490999 MAPKAPK5Q8IW41 473 aa18.92■□□□□ 0.62
SCAMP3-208ENST00000490999 RBPJLQ9UBG7 517 aa18.92■□□□□ 0.62
SCAMP3-208ENST00000490999 HERC5Q9UII4 1024 aaKnown RBP18.92■□□□□ 0.62
SCAMP3-208ENST00000490999 NOB1Q9ULX3 412 aaKnown RBP18.92■□□□□ 0.62
SCAMP3-208ENST00000490999 NDUFB9Q9Y6M9 179 aa18.92■□□□□ 0.62
SCAMP3-208ENST00000490999 SRGAP3O43295 1099 aa18.91■□□□□ 0.62
SCAMP3-208ENST00000490999 XRCC5P13010 732 aaKnown RBP18.91■□□□□ 0.62
SCAMP3-208ENST00000490999 ERVK-9P63128 1117 aa18.91■□□□□ 0.62
SCAMP3-208ENST00000490999 ERVK-24P63145 666 aa18.91■□□□□ 0.62
SCAMP3-208ENST00000490999 Q3C1V9 767 aa18.91■□□□□ 0.62
SCAMP3-208ENST00000490999 CCAR1Q8IX12 1150 aaKnown RBP18.91■□□□□ 0.62
SCAMP3-208ENST00000490999 CDCA7LQ96GN5 454 aa18.91■□□□□ 0.62
SCAMP3-208ENST00000490999 APBA2Q99767 749 aa18.91■□□□□ 0.62
SCAMP3-208ENST00000490999 WDR18Q9BV38 432 aa18.91■□□□□ 0.62
SCAMP3-208ENST00000490999 AATFQ9NY61 560 aaKnown RBP eCLIP18.91■□□□□ 0.62
SCAMP3-208ENST00000490999 LDHCP07864 332 aa18.9■□□□□ 0.62
SCAMP3-208ENST00000490999 MAPK4P31152 587 aa18.9■□□□□ 0.62
SCAMP3-208ENST00000490999 HOXA7P31268 230 aaPredicted RBP18.9■□□□□ 0.62
SCAMP3-208ENST00000490999 RGS2P41220 211 aa18.9■□□□□ 0.62
SCAMP3-208ENST00000490999 MCAMP43121 646 aa18.9■□□□□ 0.62
SCAMP3-208ENST00000490999 SLFN5Q08AF3 891 aa18.9■□□□□ 0.62
SCAMP3-208ENST00000490999 GORABQ5T7V8 394 aa18.9■□□□□ 0.62
SCAMP3-208ENST00000490999 USP6NLQ92738 828 aa18.9■□□□□ 0.62
SCAMP3-208ENST00000490999 ZBTB21Q9ULJ3 1066 aa18.9■□□□□ 0.62
SCAMP3-208ENST00000490999 AKAP2Q9Y2D5 859 aa18.9■□□□□ 0.62
SCAMP3-208ENST00000490999 PRUNE2Q8WUY3 3088 aa18.9■□□□□ 0.62
SCAMP3-208ENST00000490999 FLT1P17948 1338 aa18.9■□□□□ 0.62
SCAMP3-208ENST00000490999 MAST2Q6P0Q8 1798 aa18.9■□□□□ 0.62
SCAMP3-208ENST00000490999 ASNSP08243 561 aa18.89■□□□□ 0.61
SCAMP3-208ENST00000490999 ATN1P54259 1190 aaPredicted RBP18.89■□□□□ 0.61
SCAMP3-208ENST00000490999 ZYXQ15942 572 aaKnown RBP18.89■□□□□ 0.61
SCAMP3-208ENST00000490999 MORN1Q5T089 497 aa18.89■□□□□ 0.61
SCAMP3-208ENST00000490999 PLEKHH3Q7Z736 793 aa18.89■□□□□ 0.61
SCAMP3-208ENST00000490999 ADGRA1Q86SQ6 560 aa18.89■□□□□ 0.61
SCAMP3-208ENST00000490999 CRACR2BQ8N4Y2 399 aaPredicted RBP18.89■□□□□ 0.61
SCAMP3-208ENST00000490999 CWC22Q9HCG8 908 aaKnown RBP18.89■□□□□ 0.61
SCAMP3-208ENST00000490999 LRP2BPQ9P2M1 347 aa18.89■□□□□ 0.61
SCAMP3-208ENST00000490999 PI4KBQ9UBF8 816 aa18.89■□□□□ 0.61
SCAMP3-208ENST00000490999 SAP30BPQ9UHR5 308 aaKnown RBP18.89■□□□□ 0.61
SCAMP3-208ENST00000490999 ARID4AP29374 1257 aaPredicted RBP18.88■□□□□ 0.61
SCAMP3-208ENST00000490999 TGFBRAP1Q8WUH2 860 aa18.88■□□□□ 0.61
SCAMP3-208ENST00000490999 TRIM34Q9BYJ4 488 aa18.88■□□□□ 0.61
SCAMP3-208ENST00000490999 SENP6Q9GZR1 1112 aaPredicted RBP18.88■□□□□ 0.61
SCAMP3-208ENST00000490999 SNRKQ9NRH2 765 aa18.88■□□□□ 0.61
SCAMP3-208ENST00000490999 FLRT1Q9NZU1 646 aa18.88■□□□□ 0.61
SCAMP3-208ENST00000490999 PALD1Q9ULE6 856 aa18.88■□□□□ 0.61
SCAMP3-208ENST00000490999 FRMPD3Q5JV73 1810 aa18.88■□□□□ 0.61
SCAMP3-208ENST00000490999 USP17L10C9JJH3 530 aa18.87■□□□□ 0.61
SCAMP3-208ENST00000490999 MAP4K4O95819 1239 aaPredicted RBP18.87■□□□□ 0.61
SCAMP3-208ENST00000490999 WDR78Q5VTH9 848 aa18.87■□□□□ 0.61
SCAMP3-208ENST00000490999 TRMT44Q8IYL2 757 aaKnown RBP18.87■□□□□ 0.61
SCAMP3-208ENST00000490999 NOL10Q9BSC4 688 aaKnown RBP18.87■□□□□ 0.61
SCAMP3-208ENST00000490999 EMILIN3Q9NT22 766 aa18.87■□□□□ 0.61
SCAMP3-208ENST00000490999 POTEB2H3BUK9 544 aa18.86■□□□□ 0.61
SCAMP3-208ENST00000490999 CNMDO75829 334 aa18.86■□□□□ 0.61
SCAMP3-208ENST00000490999 NAA16Q6N069 864 aaPredicted RBP18.86■□□□□ 0.61
SCAMP3-208ENST00000490999 LBHD1Q9BQE6 289 aaPredicted RBP18.86■□□□□ 0.61
SCAMP3-208ENST00000490999 API5Q9BZZ5 524 aaKnown RBP18.86■□□□□ 0.61
SCAMP3-208ENST00000490999 DHX36Q9H2U1 1008 aaKnown RBP18.86■□□□□ 0.61
SCAMP3-208ENST00000490999 MAP2K5Q13163 448 aa18.85■□□□□ 0.61
SCAMP3-208ENST00000490999 C19orf81C9J6K1 198 aa18.84■□□□□ 0.61
SCAMP3-208ENST00000490999 GH2P01242 217 aa18.84■□□□□ 0.61
SCAMP3-208ENST00000490999 CNGA1P29973 690 aa18.84■□□□□ 0.61
SCAMP3-208ENST00000490999 ZNF697Q5TEC3 545 aa18.84■□□□□ 0.61
SCAMP3-208ENST00000490999 FEZ1Q99689 392 aa18.84■□□□□ 0.61
SCAMP3-208ENST00000490999 DDX20Q9UHI6 824 aaKnown RBP18.84■□□□□ 0.61
SCAMP3-208ENST00000490999 HDAC5Q9UQL6 1122 aa18.84■□□□□ 0.61
SCAMP3-208ENST00000490999 MUC3AQ02505 3323 aa18.84■□□□□ 0.61
SCAMP3-208ENST00000490999 BAG3O95817 575 aa18.83■□□□□ 0.6
SCAMP3-208ENST00000490999 CYP2C19P33261 490 aa18.83■□□□□ 0.6
SCAMP3-208ENST00000490999 RTP1P59025 263 aa18.83■□□□□ 0.6
SCAMP3-208ENST00000490999 MTX1Q13505 466 aa18.83■□□□□ 0.6
SCAMP3-208ENST00000490999 MFSD14CQ5VZR4 134 aa18.83■□□□□ 0.6
SCAMP3-208ENST00000490999 FAM109BQ6ICB4 259 aaPredicted RBP18.83■□□□□ 0.6
SCAMP3-208ENST00000490999 ATP11BQ9Y2G3 1177 aa18.83■□□□□ 0.6
SCAMP3-208ENST00000490999 LTBP2Q14767 1821 aa18.83■□□□□ 0.6
SCAMP3-208ENST00000490999 DYNLL1P63167 89 aaKnown RBP18.82■□□□□ 0.6
SCAMP3-208ENST00000490999 USP17L2Q6R6M4 530 aa18.82■□□□□ 0.6
SCAMP3-208ENST00000490999 METTL16Q86W50 562 aaKnown RBP18.82■□□□□ 0.6
SCAMP3-208ENST00000490999 TRPV1Q8NER1 839 aa18.82■□□□□ 0.6
SCAMP3-208ENST00000490999 GTF3C2Q8WUA4 911 aaPredicted RBP18.82■□□□□ 0.6
SCAMP3-208ENST00000490999 EDC3Q96F86 508 aaKnown RBP18.82■□□□□ 0.6
SCAMP3-208ENST00000490999 CDK5RAP2Q96SN8 1893 aa18.82■□□□□ 0.6
SCAMP3-208ENST00000490999 PNMA6EA0A0J9YXQ4 647 aa18.81■□□□□ 0.6
SCAMP3-208ENST00000490999 UQCRFS1P1P0C7P4 283 aa18.81■□□□□ 0.6
SCAMP3-208ENST00000490999 TTC39AQ5SRH9 613 aa18.81■□□□□ 0.6
SCAMP3-208ENST00000490999 C9orf50Q5SZB4 431 aa18.81■□□□□ 0.6
SCAMP3-208ENST00000490999 ANO1Q5XXA6 986 aa18.81■□□□□ 0.6
SCAMP3-208ENST00000490999 NPLOC4Q8TAT6 608 aa18.81■□□□□ 0.6
SCAMP3-208ENST00000490999 CDX2Q99626 313 aaPredicted RBP18.81■□□□□ 0.6
SCAMP3-208ENST00000490999 PRDM5Q9NQX1 630 aaPredicted RBP18.81■□□□□ 0.6
SCAMP3-208ENST00000490999 PRKAG2Q9UGJ0 569 aa18.81■□□□□ 0.6
SCAMP3-208ENST00000490999 TTC28Q96AY4 2481 aa18.8■□□□□ 0.6
SCAMP3-208ENST00000490999 FOCADQ5VW36 1801 aa18.8■□□□□ 0.6
SCAMP3-208ENST00000490999 MYCNP04198 464 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms