RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 PKN2Q16513 984 aaKnown RBP9.07□□□□□ -0.96
PRPF4B-208ENST00000490653 CDC42EP5Q6NZY7 148 aa9.07□□□□□ -0.96
PRPF4B-208ENST00000490653 HHIPL2Q6UWX4 724 aa9.07□□□□□ -0.96
PRPF4B-208ENST00000490653 PI16Q6UXB8 463 aa9.07□□□□□ -0.96
PRPF4B-208ENST00000490653 TBC1D9Q6ZT07 1266 aa9.07□□□□□ -0.96
PRPF4B-208ENST00000490653 MIGA2Q7L4E1 593 aa9.07□□□□□ -0.96
PRPF4B-208ENST00000490653 OTOP1Q7RTM1 612 aa9.07□□□□□ -0.96
PRPF4B-208ENST00000490653 WDR66Q8TBY9 1149 aa9.07□□□□□ -0.96
PRPF4B-208ENST00000490653 PANK1Q8TE04 598 aa9.07□□□□□ -0.96
PRPF4B-208ENST00000490653 TEKT1Q969V4 418 aa9.07□□□□□ -0.96
PRPF4B-208ENST00000490653 NEUROD6Q96NK8 337 aa9.07□□□□□ -0.96
PRPF4B-208ENST00000490653 PPP2R3BQ9Y5P8 575 aa9.07□□□□□ -0.96
PRPF4B-208ENST00000490653 FKTNO75072 461 aa9.06□□□□□ -0.96
PRPF4B-208ENST00000490653 EN2P19622 333 aaPredicted RBP9.06□□□□□ -0.96
PRPF4B-208ENST00000490653 FXR1P51114 621 aaKnown RBP eCLIP9.06□□□□□ -0.96
PRPF4B-208ENST00000490653 TCP10Q12799 353 aa9.06□□□□□ -0.96
PRPF4B-208ENST00000490653 RASGRF1Q13972 1273 aa9.06□□□□□ -0.96
PRPF4B-208ENST00000490653 ZNF384Q8TF68 577 aa9.06□□□□□ -0.96
PRPF4B-208ENST00000490653 USP40Q9NVE5 1235 aa9.06□□□□□ -0.96
PRPF4B-208ENST00000490653 LDHBP07195 334 aaKnown RBP9.05□□□□□ -0.96
PRPF4B-208ENST00000490653 IREB2P48200 963 aaKnown RBP9.05□□□□□ -0.96
PRPF4B-208ENST00000490653 G3BP1Q13283 466 aaKnown RBP eCLIP9.05□□□□□ -0.96
PRPF4B-208ENST00000490653 MORN1Q5T089 497 aa9.05□□□□□ -0.96
PRPF4B-208ENST00000490653 ANKRD13AQ8IZ07 590 aa9.05□□□□□ -0.96
PRPF4B-208ENST00000490653 CRIPAKQ8N1N5 446 aa9.05□□□□□ -0.96
PRPF4B-208ENST00000490653 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.05□□□□□ -0.96
PRPF4B-208ENST00000490653 ZKSCAN4Q969J2 545 aaPredicted RBP9.05□□□□□ -0.96
PRPF4B-208ENST00000490653 OPTNQ96CV9 577 aa9.05□□□□□ -0.96
PRPF4B-208ENST00000490653 THAP11Q96EK4 314 aa9.05□□□□□ -0.96
PRPF4B-208ENST00000490653 GNL3LQ9NVN8 582 aaKnown RBP9.05□□□□□ -0.96
PRPF4B-208ENST00000490653 HMG20BQ9P0W2 317 aa9.05□□□□□ -0.96
PRPF4B-208ENST00000490653 ABCF2Q9UG63 623 aa9.05□□□□□ -0.96
PRPF4B-208ENST00000490653 DENND2AQ9ULE3 1009 aa9.05□□□□□ -0.96
PRPF4B-208ENST00000490653 HDAC5Q9UQL6 1122 aa9.05□□□□□ -0.96
PRPF4B-208ENST00000490653 SUGT1Q9Y2Z0 365 aa9.05□□□□□ -0.96
PRPF4B-208ENST00000490653 MYH13Q9UKX3 1938 aa9.05□□□□□ -0.96
PRPF4B-208ENST00000490653 ARAP2Q8WZ64 1704 aa9.05□□□□□ -0.96
PRPF4B-208ENST00000490653 ZBED9Q6R2W3 1325 aa9.05□□□□□ -0.96
PRPF4B-208ENST00000490653 MANSC4A6NHS7 340 aaPredicted RBP9.04□□□□□ -0.96
PRPF4B-208ENST00000490653 SURF6O75683 361 aaKnown RBP9.04□□□□□ -0.96
PRPF4B-208ENST00000490653 INPP5BP32019 993 aa9.04□□□□□ -0.96
PRPF4B-208ENST00000490653 TNNI2P48788 182 aa9.04□□□□□ -0.96
PRPF4B-208ENST00000490653 FOXC1Q12948 553 aa9.04□□□□□ -0.96
PRPF4B-208ENST00000490653 TNFAIP1Q13829 316 aa9.04□□□□□ -0.96
PRPF4B-208ENST00000490653 VGLL4Q14135 290 aa9.04□□□□□ -0.96
PRPF4B-208ENST00000490653 LCE2AQ5TA79 106 aaPredicted RBP9.04□□□□□ -0.96
PRPF4B-208ENST00000490653 SH3BP5LQ7L8J4 393 aa9.04□□□□□ -0.96
PRPF4B-208ENST00000490653 ITPRIPQ8IWB1 547 aa9.04□□□□□ -0.96
PRPF4B-208ENST00000490653 SSH3Q8TE77 659 aa9.04□□□□□ -0.96
PRPF4B-208ENST00000490653 FAM151AQ8WW52 585 aa9.04□□□□□ -0.96
PRPF4B-208ENST00000490653 DBNDD2Q9BQY9 259 aa9.04□□□□□ -0.96
PRPF4B-208ENST00000490653 SNRKQ9NRH2 765 aa9.04□□□□□ -0.96
PRPF4B-208ENST00000490653 DAXXQ9UER7 740 aaPredicted RBP9.04□□□□□ -0.96
PRPF4B-208ENST00000490653 TRIM17Q9Y577 477 aa9.04□□□□□ -0.96
PRPF4B-208ENST00000490653 SNCAIPQ9Y6H5 919 aa9.04□□□□□ -0.96
PRPF4B-208ENST00000490653 SALL1Q9NSC2 1324 aa9.04□□□□□ -0.96
PRPF4B-208ENST00000490653 TESPA1A2RU30 521 aaPredicted RBP9.03□□□□□ -0.96
PRPF4B-208ENST00000490653 AVPP01185 164 aa9.03□□□□□ -0.96
PRPF4B-208ENST00000490653 MCAMP43121 646 aa9.03□□□□□ -0.96
PRPF4B-208ENST00000490653 SREBF2Q12772 1141 aa9.03□□□□□ -0.96
PRPF4B-208ENST00000490653 CRHR2Q13324 411 aa9.03□□□□□ -0.96
PRPF4B-208ENST00000490653 FAM83AQ86UY5 434 aa9.03□□□□□ -0.96
PRPF4B-208ENST00000490653 CD99L2Q8TCZ2 262 aa9.03□□□□□ -0.96
PRPF4B-208ENST00000490653 BRI3BPQ8WY22 251 aa9.03□□□□□ -0.96
PRPF4B-208ENST00000490653 ARMC5Q96C12 935 aa9.03□□□□□ -0.96
PRPF4B-208ENST00000490653 CCDC8Q9H0W5 538 aaPredicted RBP9.03□□□□□ -0.96
PRPF4B-208ENST00000490653 DDX4Q9NQI0 724 aaKnown RBP9.03□□□□□ -0.96
PRPF4B-208ENST00000490653 TOR4AQ9NXH8 423 aa9.03□□□□□ -0.96
PRPF4B-208ENST00000490653 TLR7Q9NYK1 1049 aaKnown RBP9.03□□□□□ -0.96
PRPF4B-208ENST00000490653 AKAP2Q9Y2D5 859 aa9.03□□□□□ -0.96
PRPF4B-208ENST00000490653 PTPN22Q9Y2R2 807 aa9.03□□□□□ -0.96
PRPF4B-208ENST00000490653 FCF1Q9Y324 198 aaKnown RBP9.03□□□□□ -0.96
PRPF4B-208ENST00000490653 MYH2Q9UKX2 1941 aa9.03□□□□□ -0.96
PRPF4B-208ENST00000490653 OTOFQ9HC10 1997 aa9.03□□□□□ -0.96
PRPF4B-208ENST00000490653 AK9Q5TCS8 1911 aa9.02□□□□□ -0.97
PRPF4B-208ENST00000490653 DDTLA6NHG4 134 aaPredicted RBP9.02□□□□□ -0.97
PRPF4B-208ENST00000490653 ZBTB48P10074 688 aaPredicted RBP9.02□□□□□ -0.97
PRPF4B-208ENST00000490653 RGS3P49796 1198 aa9.02□□□□□ -0.97
PRPF4B-208ENST00000490653 MECOMQ03112 1051 aa9.02□□□□□ -0.97
PRPF4B-208ENST00000490653 TNNI3KQ59H18 835 aa9.02□□□□□ -0.97
PRPF4B-208ENST00000490653 FKBP1CQ5VVH2 108 aa9.02□□□□□ -0.97
PRPF4B-208ENST00000490653 TREML4Q6UXN2 200 aa9.02□□□□□ -0.97
PRPF4B-208ENST00000490653 ERICH6Q7L0X2 663 aa9.02□□□□□ -0.97
PRPF4B-208ENST00000490653 FAM43AQ8N2R8 423 aa9.02□□□□□ -0.97
PRPF4B-208ENST00000490653 EAF2Q96CJ1 260 aaPredicted RBP9.02□□□□□ -0.97
PRPF4B-208ENST00000490653 WRNIP1Q96S55 665 aa9.02□□□□□ -0.97
PRPF4B-208ENST00000490653 TMOD2Q9NZR1 351 aa9.02□□□□□ -0.97
PRPF4B-208ENST00000490653 NDUFB9Q9Y6M9 179 aa9.02□□□□□ -0.97
PRPF4B-208ENST00000490653 FPGT-TNNI3KV9GXZ4 949 aa9.02□□□□□ -0.97
PRPF4B-208ENST00000490653 GAKO14976 1311 aa9.02□□□□□ -0.97
PRPF4B-208ENST00000490653 MAST3O60307 1309 aa9.02□□□□□ -0.97
PRPF4B-208ENST00000490653 LAMB1P07942 1786 aa9.01□□□□□ -0.97
PRPF4B-208ENST00000490653 CCL15-CCL14A0A0B4J2E2 113 aa9.01□□□□□ -0.97
PRPF4B-208ENST00000490653 UNCXA6NJT0 531 aa9.01□□□□□ -0.97
PRPF4B-208ENST00000490653 IRF6O14896 467 aa9.01□□□□□ -0.97
PRPF4B-208ENST00000490653 GPR37O15354 613 aa9.01□□□□□ -0.97
PRPF4B-208ENST00000490653 WDHD1O75717 1129 aaPredicted RBP9.01□□□□□ -0.97
PRPF4B-208ENST00000490653 CTGFP29279 349 aa9.01□□□□□ -0.97
PRPF4B-208ENST00000490653 ARID4AP29374 1257 aaPredicted RBP9.01□□□□□ -0.97
PRPF4B-208ENST00000490653 BTDP43251 543 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms