RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 FAM87AP0C7U9 286 aa7.8□□□□□ -1.16
HMGB1P38-201ENST00000490557 IMPDH2P12268 514 aa7.8□□□□□ -1.16
HMGB1P38-201ENST00000490557 CHMP4BP1P59074 171 aa7.8□□□□□ -1.16
HMGB1P38-201ENST00000490557 CLCQ05315 142 aa7.8□□□□□ -1.16
HMGB1P38-201ENST00000490557 NKG7Q16617 165 aa7.8□□□□□ -1.16
HMGB1P38-201ENST00000490557 CYP27C1Q4G0S4 372 aa7.8□□□□□ -1.16
HMGB1P38-201ENST00000490557 TMEM201Q5SNT2 666 aa7.8□□□□□ -1.16
HMGB1P38-201ENST00000490557 PRAMEF13Q5VWM6 474 aa7.8□□□□□ -1.16
HMGB1P38-201ENST00000490557 MCATQ8IVS2 390 aaKnown RBP7.8□□□□□ -1.16
HMGB1P38-201ENST00000490557 TOP6BLQ8N6T0 577 aa7.8□□□□□ -1.16
HMGB1P38-201ENST00000490557 MFSD2AQ8NA29 543 aa7.8□□□□□ -1.16
HMGB1P38-201ENST00000490557 XAGE3Q8WTP9 111 aa7.8□□□□□ -1.16
HMGB1P38-201ENST00000490557 ACSF2Q96CM8 615 aaPredicted RBP7.8□□□□□ -1.16
HMGB1P38-201ENST00000490557 CRBNQ96SW2 442 aa7.8□□□□□ -1.16
HMGB1P38-201ENST00000490557 DPH2Q9BQC3 489 aaPredicted RBP7.8□□□□□ -1.16
HMGB1P38-201ENST00000490557 METTL22Q9BUU2 404 aaPredicted RBP7.8□□□□□ -1.16
HMGB1P38-201ENST00000490557 GINM1Q9NU53 330 aa7.8□□□□□ -1.16
HMGB1P38-201ENST00000490557 TJP2Q9UDY2 1190 aa7.8□□□□□ -1.16
HMGB1P38-201ENST00000490557 CST3P01034 146 aaPredicted RBP7.79□□□□□ -1.16
HMGB1P38-201ENST00000490557 SLBPQ14493 270 aaKnown RBP eCLIP7.79□□□□□ -1.16
HMGB1P38-201ENST00000490557 LRRFIP1Q32MZ4 808 aaKnown RBP7.79□□□□□ -1.16
HMGB1P38-201ENST00000490557 PRSS36Q5K4E3 855 aa7.79□□□□□ -1.16
HMGB1P38-201ENST00000490557 SEZ6L2Q6UXD5 910 aa7.79□□□□□ -1.16
HMGB1P38-201ENST00000490557 MRPL41Q8IXM3 137 aaKnown RBP7.79□□□□□ -1.16
HMGB1P38-201ENST00000490557 PHACTR4Q8IZ21 702 aa7.79□□□□□ -1.16
HMGB1P38-201ENST00000490557 SHKBP1Q8TBC3 707 aa7.79□□□□□ -1.16
HMGB1P38-201ENST00000490557 RASGRP4Q8TDF6 673 aa7.79□□□□□ -1.16
HMGB1P38-201ENST00000490557 MIPEPQ99797 713 aa7.79□□□□□ -1.16
HMGB1P38-201ENST00000490557 EHMT1Q9H9B1 1298 aa7.79□□□□□ -1.16
HMGB1P38-201ENST00000490557 PRDM10Q9NQV6 1147 aa7.79□□□□□ -1.16
HMGB1P38-201ENST00000490557 ATE1O95260 518 aa7.78□□□□□ -1.16
HMGB1P38-201ENST00000490557 ADMP35318 185 aa7.78□□□□□ -1.16
HMGB1P38-201ENST00000490557 CAP2P40123 477 aa7.78□□□□□ -1.16
HMGB1P38-201ENST00000490557 NASPP49321 788 aaPredicted RBP7.78□□□□□ -1.16
HMGB1P38-201ENST00000490557 ARHGAP27Q6ZUM4 889 aa7.78□□□□□ -1.16
HMGB1P38-201ENST00000490557 SEC16BQ96JE7 1060 aa7.78□□□□□ -1.16
HMGB1P38-201ENST00000490557 GMIPQ9P107 970 aa7.78□□□□□ -1.16
HMGB1P38-201ENST00000490557 PPT2Q9UMR5 302 aa7.78□□□□□ -1.16
HMGB1P38-201ENST00000490557 FAM170BA6NMN3 283 aa7.77□□□□□ -1.17
HMGB1P38-201ENST00000490557 RAG1P15918 1043 aa7.77□□□□□ -1.17
HMGB1P38-201ENST00000490557 DNAJA1P31689 397 aaKnown RBP7.77□□□□□ -1.17
HMGB1P38-201ENST00000490557 SOX9P48436 509 aa7.77□□□□□ -1.17
HMGB1P38-201ENST00000490557 ARID5AQ03989 594 aa7.77□□□□□ -1.17
HMGB1P38-201ENST00000490557 ZNF746Q6NUN9 644 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P38-201ENST00000490557 OGFOD3Q6PK18 319 aa7.77□□□□□ -1.17
HMGB1P38-201ENST00000490557 CCDC81Q6ZN84 652 aa7.77□□□□□ -1.17
HMGB1P38-201ENST00000490557 ZNF765Q7L2R6 523 aa7.77□□□□□ -1.17
HMGB1P38-201ENST00000490557 DUSP23Q9BVJ7 150 aa7.77□□□□□ -1.17
HMGB1P38-201ENST00000490557 ZNRF3Q9ULT6 936 aa7.77□□□□□ -1.17
HMGB1P38-201ENST00000490557 TPX2Q9ULW0 747 aaKnown RBP7.77□□□□□ -1.17
HMGB1P38-201ENST00000490557 LEMD3Q9Y2U8 911 aa7.77□□□□□ -1.17
HMGB1P38-201ENST00000490557 UPK3BL1B0FP48 263 aa7.76□□□□□ -1.17
HMGB1P38-201ENST00000490557 UPK3BL2E5RIL1 263 aa7.76□□□□□ -1.17
HMGB1P38-201ENST00000490557 F13BP05160 661 aa7.76□□□□□ -1.17
HMGB1P38-201ENST00000490557 SSBP05455 408 aaKnown RBP eCLIP7.76□□□□□ -1.17
HMGB1P38-201ENST00000490557 CPSF6Q16630 551 aaKnown RBP eCLIP7.76□□□□□ -1.17
HMGB1P38-201ENST00000490557 NAALADL2Q58DX5 795 aa7.76□□□□□ -1.17
HMGB1P38-201ENST00000490557 LETMD1Q6P1Q0 360 aa7.76□□□□□ -1.17
HMGB1P38-201ENST00000490557 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.76□□□□□ -1.17
HMGB1P38-201ENST00000490557 TINF2Q9BSI4 451 aa7.76□□□□□ -1.17
HMGB1P38-201ENST00000490557 GTF2IRD1Q9UHL9 959 aa7.76□□□□□ -1.17
HMGB1P38-201ENST00000490557 STRIP2Q9ULQ0 834 aa7.76□□□□□ -1.17
HMGB1P38-201ENST00000490557 SLC22A31A6NKX4 558 aa7.75□□□□□ -1.17
HMGB1P38-201ENST00000490557 CHURC1-FNTBB4DL54 471 aa7.75□□□□□ -1.17
HMGB1P38-201ENST00000490557 LEFTY1O75610 366 aa7.75□□□□□ -1.17
HMGB1P38-201ENST00000490557 EIF6P56537 245 aaKnown RBP7.75□□□□□ -1.17
HMGB1P38-201ENST00000490557 ARSHQ5FYA8 562 aa7.75□□□□□ -1.17
HMGB1P38-201ENST00000490557 OVOS1Q6IE37 1185 aa7.75□□□□□ -1.17
HMGB1P38-201ENST00000490557 SLFN12Q8IYM2 578 aa7.75□□□□□ -1.17
HMGB1P38-201ENST00000490557 TMEM40Q8WWA1 233 aa7.75□□□□□ -1.17
HMGB1P38-201ENST00000490557 PSMG3-AS1Q96PY0 264 aa7.75□□□□□ -1.17
HMGB1P38-201ENST00000490557 SRRTQ9BXP5 876 aaKnown RBP7.75□□□□□ -1.17
HMGB1P38-201ENST00000490557 LRRC4CQ9HCJ2 640 aa7.75□□□□□ -1.17
HMGB1P38-201ENST00000490557 ATF4P18848 351 aaPredicted RBP7.74□□□□□ -1.17
HMGB1P38-201ENST00000490557 CYP7A1P22680 504 aa7.74□□□□□ -1.17
HMGB1P38-201ENST00000490557 GBP1P32455 592 aa7.74□□□□□ -1.17
HMGB1P38-201ENST00000490557 GRIK1P39086 918 aa7.74□□□□□ -1.17
HMGB1P38-201ENST00000490557 ETV3P41162 512 aa7.74□□□□□ -1.17
HMGB1P38-201ENST00000490557 NLRC3Q7RTR2 1065 aa7.74□□□□□ -1.17
HMGB1P38-201ENST00000490557 SLC43A3Q8NBI5 491 aa7.74□□□□□ -1.17
HMGB1P38-201ENST00000490557 CYB5D2Q8WUJ1 264 aa7.74□□□□□ -1.17
HMGB1P38-201ENST00000490557 GATA6Q92908 595 aa7.74□□□□□ -1.17
HMGB1P38-201ENST00000490557 CCDC74BQ96LY2 380 aa7.74□□□□□ -1.17
HMGB1P38-201ENST00000490557 C8orf37Q96NL8 207 aa7.74□□□□□ -1.17
HMGB1P38-201ENST00000490557 PRDM5Q9NQX1 630 aaPredicted RBP7.74□□□□□ -1.17
HMGB1P38-201ENST00000490557 PIM2Q9P1W9 311 aa7.74□□□□□ -1.17
HMGB1P38-201ENST00000490557 CYP26A1O43174 497 aa7.73□□□□□ -1.17
HMGB1P38-201ENST00000490557 SLITRK5O94991 958 aa7.73□□□□□ -1.17
HMGB1P38-201ENST00000490557 ZDHHC13Q8IUH4 622 aa7.73□□□□□ -1.17
HMGB1P38-201ENST00000490557 GNAT3A8MTJ3 354 aa7.72□□□□□ -1.17
HMGB1P38-201ENST00000490557 DNAJA2O60884 412 aa7.72□□□□□ -1.17
HMGB1P38-201ENST00000490557 CDH24Q86UP0 819 aa7.72□□□□□ -1.17
HMGB1P38-201ENST00000490557 SHISA5Q8N114 240 aa7.72□□□□□ -1.17
HMGB1P38-201ENST00000490557 OR6P1Q8NGX9 317 aa7.72□□□□□ -1.17
HMGB1P38-201ENST00000490557 ANAPC16Q96DE5 110 aa7.72□□□□□ -1.17
HMGB1P38-201ENST00000490557 ATG4CQ96DT6 458 aa7.72□□□□□ -1.17
HMGB1P38-201ENST00000490557 KIF2CQ99661 725 aa7.72□□□□□ -1.17
HMGB1P38-201ENST00000490557 ANTXR1Q9H6X2 564 aa7.72□□□□□ -1.17
HMGB1P38-201ENST00000490557 MEIS3P2A8K0S8 358 aa7.71□□□□□ -1.18
HMGB1P38-201ENST00000490557 ADAM23O75077 832 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms