RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 MTMR2Q13614 643 aa17.15■□□□□ 0.34
EXOSC3-207ENST00000490516 RABL6Q3YEC7 729 aaPredicted RBP17.15■□□□□ 0.34
EXOSC3-207ENST00000490516 MFSD14CQ5VZR4 134 aa17.15■□□□□ 0.34
EXOSC3-207ENST00000490516 NECAB3Q96P71 396 aaPredicted RBP17.15■□□□□ 0.34
EXOSC3-207ENST00000490516 PAGR1Q9BTK6 254 aa17.15■□□□□ 0.34
EXOSC3-207ENST00000490516 TBC1D2Q9BYX2 928 aa17.15■□□□□ 0.34
EXOSC3-207ENST00000490516 MSCO60682 206 aa17.14■□□□□ 0.33
EXOSC3-207ENST00000490516 CAP2P40123 477 aa17.14■□□□□ 0.33
EXOSC3-207ENST00000490516 TRPV1Q8NER1 839 aa17.14■□□□□ 0.33
EXOSC3-207ENST00000490516 LPIN2Q92539 896 aa17.14■□□□□ 0.33
EXOSC3-207ENST00000490516 EDC3Q96F86 508 aaKnown RBP17.14■□□□□ 0.33
EXOSC3-207ENST00000490516 C1QTNF1Q9BXJ1 281 aa17.14■□□□□ 0.33
EXOSC3-207ENST00000490516 SRCIN1Q9C0H9 1055 aa17.14■□□□□ 0.33
EXOSC3-207ENST00000490516 SALL1Q9NSC2 1324 aa17.14■□□□□ 0.33
EXOSC3-207ENST00000490516 BTDP43251 543 aa17.13■□□□□ 0.33
EXOSC3-207ENST00000490516 SNX17Q15036 470 aa17.13■□□□□ 0.33
EXOSC3-207ENST00000490516 CCDC85BQ15834 202 aaPredicted RBP17.13■□□□□ 0.33
EXOSC3-207ENST00000490516 AS3MTQ9HBK9 375 aa17.13■□□□□ 0.33
EXOSC3-207ENST00000490516 CWC22Q9HCG8 908 aaKnown RBP17.13■□□□□ 0.33
EXOSC3-207ENST00000490516 TMOD4Q9NZQ9 345 aa17.13■□□□□ 0.33
EXOSC3-207ENST00000490516 UTYO14607 1347 aa17.13■□□□□ 0.33
EXOSC3-207ENST00000490516 CYP2C19P33261 490 aa17.12■□□□□ 0.33
EXOSC3-207ENST00000490516 BACE1P56817 501 aa17.12■□□□□ 0.33
EXOSC3-207ENST00000490516 ANO1Q5XXA6 986 aa17.12■□□□□ 0.33
EXOSC3-207ENST00000490516 IL27Q8NEV9 243 aa17.12■□□□□ 0.33
EXOSC3-207ENST00000490516 GAS2L1Q99501 681 aaPredicted RBP17.12■□□□□ 0.33
EXOSC3-207ENST00000490516 PRDM12Q9H4Q4 367 aa17.12■□□□□ 0.33
EXOSC3-207ENST00000490516 FANCIQ9NVI1 1328 aa17.12■□□□□ 0.33
EXOSC3-207ENST00000490516 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.11■□□□□ 0.33
EXOSC3-207ENST00000490516 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.11■□□□□ 0.33
EXOSC3-207ENST00000490516 KBTBD13C9JR72 458 aa17.11■□□□□ 0.33
EXOSC3-207ENST00000490516 MYCNP04198 464 aaPredicted RBP17.11■□□□□ 0.33
EXOSC3-207ENST00000490516 AKNAD1Q5T1N1 836 aa17.11■□□□□ 0.33
EXOSC3-207ENST00000490516 DZIP1Q86YF9 867 aaKnown RBP17.11■□□□□ 0.33
EXOSC3-207ENST00000490516 WWC1Q8IX03 1113 aa17.11■□□□□ 0.33
EXOSC3-207ENST00000490516 ARRDC4Q8NCT1 418 aa17.11■□□□□ 0.33
EXOSC3-207ENST00000490516 TIFAQ96CG3 184 aa17.11■□□□□ 0.33
EXOSC3-207ENST00000490516 HCN4Q9Y3Q4 1203 aa17.11■□□□□ 0.33
EXOSC3-207ENST00000490516 ARIH1Q9Y4X5 557 aaPredicted RBP17.11■□□□□ 0.33
EXOSC3-207ENST00000490516 SIPA1L1O43166 1804 aa17.11■□□□□ 0.33
EXOSC3-207ENST00000490516 ADCYAP1R1P41586 468 aa17.1■□□□□ 0.33
EXOSC3-207ENST00000490516 RHBDL3P58872 404 aa17.1■□□□□ 0.33
EXOSC3-207ENST00000490516 JAG1P78504 1218 aa17.1■□□□□ 0.33
EXOSC3-207ENST00000490516 ATP2B2Q01814 1243 aa17.1■□□□□ 0.33
EXOSC3-207ENST00000490516 TLE2Q04725 743 aa17.1■□□□□ 0.33
EXOSC3-207ENST00000490516 WDR78Q5VTH9 848 aa17.1■□□□□ 0.33
EXOSC3-207ENST00000490516 NPLOC4Q8TAT6 608 aa17.1■□□□□ 0.33
EXOSC3-207ENST00000490516 FERMT2Q96AC1 680 aa17.1■□□□□ 0.33
EXOSC3-207ENST00000490516 LRFN3Q9BTN0 628 aa17.1■□□□□ 0.33
EXOSC3-207ENST00000490516 WDR18Q9BV38 432 aa17.1■□□□□ 0.33
EXOSC3-207ENST00000490516 GNL3LQ9NVN8 582 aaKnown RBP17.1■□□□□ 0.33
EXOSC3-207ENST00000490516 DENND2AQ9ULE3 1009 aa17.1■□□□□ 0.33
EXOSC3-207ENST00000490516 REV3LO60673 3130 aa17.1■□□□□ 0.33
EXOSC3-207ENST00000490516 CYBAP13498 195 aa17.09■□□□□ 0.33
EXOSC3-207ENST00000490516 PHKA1P46020 1223 aa17.09■□□□□ 0.33
EXOSC3-207ENST00000490516 MROH7-TTC4A0A0A0MT08 1334 aa17.08■□□□□ 0.32
EXOSC3-207ENST00000490516 SLC15A5A6NIM6 579 aa17.08■□□□□ 0.32
EXOSC3-207ENST00000490516 EYA2O00167 538 aa17.08■□□□□ 0.32
EXOSC3-207ENST00000490516 CNMDO75829 334 aa17.08■□□□□ 0.32
EXOSC3-207ENST00000490516 EXOSC9Q06265 439 aaKnown RBP17.08■□□□□ 0.32
EXOSC3-207ENST00000490516 ADGRE1Q14246 886 aa17.08■□□□□ 0.32
EXOSC3-207ENST00000490516 SHROOM1Q2M3G4 852 aaPredicted RBP17.08■□□□□ 0.32
EXOSC3-207ENST00000490516 NCBP3Q53F19 620 aaKnown RBP17.08■□□□□ 0.32
EXOSC3-207ENST00000490516 FAM163AQ96GL9 167 aaPredicted RBP17.08■□□□□ 0.32
EXOSC3-207ENST00000490516 ABCF2Q9UG63 623 aa17.08■□□□□ 0.32
EXOSC3-207ENST00000490516 CHD9Q3L8U1 2897 aa17.08■□□□□ 0.32
EXOSC3-207ENST00000490516 PTPREP23469 700 aa17.07■□□□□ 0.32
EXOSC3-207ENST00000490516 PBX2P40425 430 aa17.07■□□□□ 0.32
EXOSC3-207ENST00000490516 FPGSQ05932 587 aa17.07■□□□□ 0.32
EXOSC3-207ENST00000490516 ATP2B3Q16720 1220 aa17.07■□□□□ 0.32
EXOSC3-207ENST00000490516 CCDC27Q2M243 656 aa17.07■□□□□ 0.32
EXOSC3-207ENST00000490516 ATG9AQ7Z3C6 839 aa17.07■□□□□ 0.32
EXOSC3-207ENST00000490516 SLF2Q8IX21 1173 aa17.07■□□□□ 0.32
EXOSC3-207ENST00000490516 EPHX3Q9H6B9 360 aa17.07■□□□□ 0.32
EXOSC3-207ENST00000490516 TACC3Q9Y6A5 838 aa17.07■□□□□ 0.32
EXOSC3-207ENST00000490516 GBF1Q92538 1859 aa17.07■□□□□ 0.32
EXOSC3-207ENST00000490516 IL16Q14005 1332 aa17.06■□□□□ 0.32
EXOSC3-207ENST00000490516 XIRP2A4UGR9 3374 aa17.06■□□□□ 0.32
EXOSC3-207ENST00000490516 GPR75-ASB3A0A0A6YYF3 556 aa17.06■□□□□ 0.32
EXOSC3-207ENST00000490516 C19orf81C9J6K1 198 aa17.06■□□□□ 0.32
EXOSC3-207ENST00000490516 SEMA3EO15041 775 aa17.06■□□□□ 0.32
EXOSC3-207ENST00000490516 NPM3O75607 178 aaKnown RBP17.06■□□□□ 0.32
EXOSC3-207ENST00000490516 GLRX3O76003 335 aaKnown RBP17.06■□□□□ 0.32
EXOSC3-207ENST00000490516 IGHA2P01877 340 aa17.06■□□□□ 0.32
EXOSC3-207ENST00000490516 CLTBP09497 229 aa17.06■□□□□ 0.32
EXOSC3-207ENST00000490516 HOXC6P09630 235 aa17.06■□□□□ 0.32
EXOSC3-207ENST00000490516 RAG1P15918 1043 aa17.06■□□□□ 0.32
EXOSC3-207ENST00000490516 IGFBP4P22692 258 aa17.06■□□□□ 0.32
EXOSC3-207ENST00000490516 RFX5P48382 616 aaPredicted RBP17.06■□□□□ 0.32
EXOSC3-207ENST00000490516 C1orf53Q5VUE5 145 aa17.06■□□□□ 0.32
EXOSC3-207ENST00000490516 ALYREFQ86V81 257 aaKnown RBP17.06■□□□□ 0.32
EXOSC3-207ENST00000490516 ZGPATQ8N5A5 531 aaKnown RBP17.06■□□□□ 0.32
EXOSC3-207ENST00000490516 GTF3C2Q8WUA4 911 aaPredicted RBP17.06■□□□□ 0.32
EXOSC3-207ENST00000490516 SMCHD1A6NHR9 2005 aa17.06■□□□□ 0.32
EXOSC3-207ENST00000490516 PIEZO1Q92508 2521 aa17.05■□□□□ 0.32
EXOSC3-207ENST00000490516 GRXCR1A8MXD5 290 aa17.05■□□□□ 0.32
EXOSC3-207ENST00000490516 USP17L10C9JJH3 530 aa17.05■□□□□ 0.32
EXOSC3-207ENST00000490516 BMP1P13497 986 aa17.05■□□□□ 0.32
EXOSC3-207ENST00000490516 LRRC41Q15345 812 aa17.05■□□□□ 0.32
EXOSC3-207ENST00000490516 ZNF384Q8TF68 577 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms