RNA–Protein interactions for RNA: ENST00000490354.5

RBM39-235, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-235ENST00000490354 TTC37Q6PGP7 1564 aa6.58□□□□□ -1.36
RBM39-235ENST00000490354 IGHA2P01877 340 aa6.58□□□□□ -1.36
RBM39-235ENST00000490354 PDZD3Q86UT5 571 aa6.58□□□□□ -1.36
RBM39-235ENST00000490354 TMEM40Q8WWA1 233 aa6.58□□□□□ -1.36
RBM39-235ENST00000490354 KCNB2Q92953 911 aa6.58□□□□□ -1.36
RBM39-235ENST00000490354 HRASLS5Q96KN8 279 aa6.58□□□□□ -1.36
RBM39-235ENST00000490354 C1orf115Q9H7X2 142 aa6.58□□□□□ -1.36
RBM39-235ENST00000490354 PCOLCE2Q9UKZ9 415 aa6.58□□□□□ -1.36
RBM39-235ENST00000490354 TRAK1Q9UPV9 953 aa6.58□□□□□ -1.36
RBM39-235ENST00000490354 ARHGEF12Q9NZN5 1544 aa6.58□□□□□ -1.36
RBM39-235ENST00000490354 ADGRL2O95490 1459 aa6.58□□□□□ -1.36
RBM39-235ENST00000490354 CCDC141Q6ZP82 1450 aa6.58□□□□□ -1.36
RBM39-235ENST00000490354 C9orf84Q5VXU9 1444 aa6.58□□□□□ -1.36
RBM39-235ENST00000490354 SCAPERQ9BY12 1400 aa6.58□□□□□ -1.36
RBM39-235ENST00000490354 TRAPPC8Q9Y2L5 1435 aa6.58□□□□□ -1.36
RBM39-235ENST00000490354 DHX57Q6P158 1386 aaKnown RBP6.57□□□□□ -1.36
RBM39-235ENST00000490354 SPAG9O60271 1321 aaKnown RBP6.57□□□□□ -1.36
RBM39-235ENST00000490354 NEFMP07197 916 aa6.57□□□□□ -1.36
RBM39-235ENST00000490354 DTHD1Q6ZMT9 781 aa6.57□□□□□ -1.36
RBM39-235ENST00000490354 TOP6BLQ8N6T0 577 aa6.57□□□□□ -1.36
RBM39-235ENST00000490354 EPS8L3Q8TE67 593 aaKnown RBP6.57□□□□□ -1.36
RBM39-235ENST00000490354 GPN3Q9UHW5 284 aaPredicted RBP6.57□□□□□ -1.36
RBM39-235ENST00000490354 NEO1Q92859 1461 aa6.57□□□□□ -1.36
RBM39-235ENST00000490354 RTEL1-TNFRSF6BF6WH68 1400 aa6.57□□□□□ -1.36
RBM39-235ENST00000490354 ABCA9Q8IUA7 1624 aa6.57□□□□□ -1.36
RBM39-235ENST00000490354 GLI2P10070 1586 aa6.57□□□□□ -1.36
RBM39-235ENST00000490354 ADGRL1O94910 1474 aa6.56□□□□□ -1.36
RBM39-235ENST00000490354 TMEM265A0A087WTH1 108 aa6.56□□□□□ -1.36
RBM39-235ENST00000490354 ITIH2P19823 946 aa6.56□□□□□ -1.36
RBM39-235ENST00000490354 FCGRTP55899 365 aa6.56□□□□□ -1.36
RBM39-235ENST00000490354 HNRNPUQ00839 825 aaKnown RBP eCLIP6.56□□□□□ -1.36
RBM39-235ENST00000490354 ANGEL2Q5VTE6 544 aaKnown RBP6.56□□□□□ -1.36
RBM39-235ENST00000490354 TMC1Q8TDI8 760 aa6.56□□□□□ -1.36
RBM39-235ENST00000490354 STK35Q8TDR2 534 aa6.56□□□□□ -1.36
RBM39-235ENST00000490354 ISL2Q96A47 359 aa6.56□□□□□ -1.36
RBM39-235ENST00000490354 CITED4Q96RK1 184 aa6.56□□□□□ -1.36
RBM39-235ENST00000490354 SSU72Q9NP77 194 aaKnown RBP6.56□□□□□ -1.36
RBM39-235ENST00000490354 ARHGEF5Q12774 1597 aa6.56□□□□□ -1.36
RBM39-235ENST00000490354 KIF15Q9NS87 1388 aa6.56□□□□□ -1.36
RBM39-235ENST00000490354 PPP2R3AQ06190 1150 aa6.55□□□□□ -1.36
RBM39-235ENST00000490354 PKN1Q16512 942 aa6.55□□□□□ -1.36
RBM39-235ENST00000490354 SPOCD1Q6ZMY3 1216 aa6.55□□□□□ -1.36
RBM39-235ENST00000490354 KSR1Q8IVT5 923 aa6.55□□□□□ -1.36
RBM39-235ENST00000490354 HEXIM2Q96MH2 286 aaKnown RBP6.55□□□□□ -1.36
RBM39-235ENST00000490354 CSRNP1Q96S65 589 aa6.55□□□□□ -1.36
RBM39-235ENST00000490354 PRDM7Q9NQW5 492 aa6.55□□□□□ -1.36
RBM39-235ENST00000490354 TMEM39AQ9NV64 488 aa6.55□□□□□ -1.36
RBM39-235ENST00000490354 ANKRD50Q9ULJ7 1429 aa6.55□□□□□ -1.36
RBM39-235ENST00000490354 SAMD9LQ8IVG5 1584 aa6.55□□□□□ -1.36
RBM39-235ENST00000490354 ITSN2Q9NZM3 1697 aa6.55□□□□□ -1.36
RBM39-235ENST00000490354 DNMT1P26358 1616 aaKnown RBP6.54□□□□□ -1.36
RBM39-235ENST00000490354 PREX2Q70Z35 1606 aa6.54□□□□□ -1.36
RBM39-235ENST00000490354 RAPGEF3O95398 923 aa6.54□□□□□ -1.36
RBM39-235ENST00000490354 FBLN7Q53RD9 439 aa6.54□□□□□ -1.36
RBM39-235ENST00000490354 ZC3H12AQ5D1E8 599 aaKnown RBP6.54□□□□□ -1.36
RBM39-235ENST00000490354 B4GALNT3Q6L9W6 998 aa6.54□□□□□ -1.36
RBM39-235ENST00000490354 SLC23A3Q6PIS1 610 aa6.54□□□□□ -1.36
RBM39-235ENST00000490354 PI16Q6UXB8 463 aa6.54□□□□□ -1.36
RBM39-235ENST00000490354 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.54□□□□□ -1.36
RBM39-235ENST00000490354 MPHOSPH9Q99550 1183 aa6.54□□□□□ -1.36
RBM39-235ENST00000490354 TNKS2Q9H2K2 1166 aa6.54□□□□□ -1.36
RBM39-235ENST00000490354 USTQ9Y2C2 406 aa6.54□□□□□ -1.36
RBM39-235ENST00000490354 ABCC1P33527 1531 aa6.54□□□□□ -1.36
RBM39-235ENST00000490354 SYCP2Q9BX26 1530 aa6.54□□□□□ -1.36
RBM39-235ENST00000490354 POGZQ7Z3K3 1410 aa6.53□□□□□ -1.36
RBM39-235ENST00000490354 MESP2Q0VG99 397 aa6.53□□□□□ -1.36
RBM39-235ENST00000490354 SULF2Q8IWU5 870 aa6.53□□□□□ -1.36
RBM39-235ENST00000490354 RNF214Q8ND24 703 aa6.53□□□□□ -1.36
RBM39-235ENST00000490354 FLAD1Q8NFF5 587 aa6.53□□□□□ -1.36
RBM39-235ENST00000490354 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.53□□□□□ -1.36
RBM39-235ENST00000490354 DHX29Q7Z478 1369 aaKnown RBP6.53□□□□□ -1.36
RBM39-235ENST00000490354 DENND4BO75064 1496 aaPredicted RBP6.53□□□□□ -1.36
RBM39-235ENST00000490354 ZNF518AQ6AHZ1 1483 aa6.53□□□□□ -1.36
RBM39-235ENST00000490354 TEX14Q8IWB6 1497 aa6.53□□□□□ -1.36
RBM39-235ENST00000490354 ERVK-24P63145 666 aa6.52□□□□□ -1.37
RBM39-235ENST00000490354 MAP1SQ66K74 1059 aaPredicted RBP6.52□□□□□ -1.37
RBM39-235ENST00000490354 FAM214BQ7L5A3 538 aa6.52□□□□□ -1.37
RBM39-235ENST00000490354 GPBAR1Q8TDU6 330 aa6.52□□□□□ -1.37
RBM39-235ENST00000490354 SLC38A3Q99624 504 aa6.52□□□□□ -1.37
RBM39-235ENST00000490354 SNX11Q9Y5W9 270 aa6.52□□□□□ -1.37
RBM39-235ENST00000490354 CDC42BPAQ5VT25 1732 aa6.52□□□□□ -1.37
RBM39-235ENST00000490354 MLH3Q9UHC1 1453 aa6.52□□□□□ -1.37
RBM39-235ENST00000490354 LRRC10BA6NIK2 292 aa6.51□□□□□ -1.37
RBM39-235ENST00000490354 ARNTP27540 789 aa6.51□□□□□ -1.37
RBM39-235ENST00000490354 ZSWIM9Q86XI8 627 aa6.51□□□□□ -1.37
RBM39-235ENST00000490354 ALKBH8Q96BT7 664 aaKnown RBP6.51□□□□□ -1.37
RBM39-235ENST00000490354 FAM84AQ96KN4 292 aa6.51□□□□□ -1.37
RBM39-235ENST00000490354 BCO2Q9BYV7 579 aa6.51□□□□□ -1.37
RBM39-235ENST00000490354 TIMELESSQ9UNS1 1208 aa6.51□□□□□ -1.37
RBM39-235ENST00000490354 NUP155O75694 1391 aa6.51□□□□□ -1.37
RBM39-235ENST00000490354 DIP2BQ9P265 1576 aa6.51□□□□□ -1.37
RBM39-235ENST00000490354 MAST1Q9Y2H9 1570 aa6.51□□□□□ -1.37
RBM39-235ENST00000490354 ERBINQ96RT1 1412 aa6.5□□□□□ -1.37
RBM39-235ENST00000490354 ZNF503-AS2A6NEH8 195 aa6.5□□□□□ -1.37
RBM39-235ENST00000490354 XRCC5P13010 732 aaKnown RBP6.5□□□□□ -1.37
RBM39-235ENST00000490354 ZP2Q05996 745 aa6.5□□□□□ -1.37
RBM39-235ENST00000490354 IKZF1Q13422 519 aa6.5□□□□□ -1.37
RBM39-235ENST00000490354 PPM1JQ5JR12 505 aa6.5□□□□□ -1.37
RBM39-235ENST00000490354 MPRIPQ6WCQ1 1025 aa6.5□□□□□ -1.37
RBM39-235ENST00000490354 SPACA3Q8IXA5 215 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms