RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 PIP4K2BP78356 416 aa4.65□□□□□ -1.67
CRNKL1-203ENST00000490258 DSC3Q14574 896 aa4.65□□□□□ -1.67
CRNKL1-203ENST00000490258 GLYCTKQ8IVS8 523 aa4.65□□□□□ -1.67
CRNKL1-203ENST00000490258 KLHL23Q8NBE8 558 aa4.65□□□□□ -1.67
CRNKL1-203ENST00000490258 BSNDQ8WZ55 320 aa4.65□□□□□ -1.67
CRNKL1-203ENST00000490258 SPACA7Q96KW9 195 aa4.65□□□□□ -1.67
CRNKL1-203ENST00000490258 PPP1R16BQ96T49 567 aa4.65□□□□□ -1.67
CRNKL1-203ENST00000490258 HIRIP3Q9BW71 556 aaPredicted RBP4.65□□□□□ -1.67
CRNKL1-203ENST00000490258 SLC5A6Q9Y289 635 aa4.65□□□□□ -1.67
CRNKL1-203ENST00000490258 ARHGEF28Q8N1W1 1705 aaKnown RBP4.65□□□□□ -1.67
CRNKL1-203ENST00000490258 TRPM2O94759 1503 aa4.65□□□□□ -1.67
CRNKL1-203ENST00000490258 RNF123Q5XPI4 1314 aa4.65□□□□□ -1.67
CRNKL1-203ENST00000490258 ANKRD30AQ9BXX3 1397 aa4.65□□□□□ -1.67
CRNKL1-203ENST00000490258 NRXN3Q9Y4C0 1643 aa4.64□□□□□ -1.67
CRNKL1-203ENST00000490258 ERBINQ96RT1 1412 aa4.64□□□□□ -1.67
CRNKL1-203ENST00000490258 MYOM1P52179 1685 aa4.64□□□□□ -1.67
CRNKL1-203ENST00000490258 PLA2R1Q13018 1463 aa4.64□□□□□ -1.67
CRNKL1-203ENST00000490258 ADGRB3O60242 1522 aa4.64□□□□□ -1.67
CRNKL1-203ENST00000490258 ZBTB7CA1YPR0 619 aa4.64□□□□□ -1.67
CRNKL1-203ENST00000490258 GAS2O43903 313 aaKnown RBP4.64□□□□□ -1.67
CRNKL1-203ENST00000490258 CTSBP07858 339 aa4.64□□□□□ -1.67
CRNKL1-203ENST00000490258 EDN3P14138 238 aa4.64□□□□□ -1.67
CRNKL1-203ENST00000490258 ZNF423Q2M1K9 1284 aa4.64□□□□□ -1.67
CRNKL1-203ENST00000490258 KIAA0319Q5VV43 1072 aa4.64□□□□□ -1.67
CRNKL1-203ENST00000490258 PRPF40BQ6NWY9 871 aaKnown RBP4.64□□□□□ -1.67
CRNKL1-203ENST00000490258 AMIGO3Q86WK7 504 aa4.64□□□□□ -1.67
CRNKL1-203ENST00000490258 CITED4Q96RK1 184 aa4.64□□□□□ -1.67
CRNKL1-203ENST00000490258 SOX17Q9H6I2 414 aaPredicted RBP4.64□□□□□ -1.67
CRNKL1-203ENST00000490258 ABCB6Q9NP58 842 aa4.64□□□□□ -1.67
CRNKL1-203ENST00000490258 OSGEPQ9NPF4 335 aa4.64□□□□□ -1.67
CRNKL1-203ENST00000490258 CNTLNQ9NXG0 1405 aa4.63□□□□□ -1.67
CRNKL1-203ENST00000490258 STRCP1A6NGW2 1772 aa4.63□□□□□ -1.67
CRNKL1-203ENST00000490258 RGPD8O14715 1765 aaPredicted RBP4.63□□□□□ -1.67
CRNKL1-203ENST00000490258 REREQ9P2R6 1566 aa4.63□□□□□ -1.67
CRNKL1-203ENST00000490258 TIAF1O95411 115 aa4.63□□□□□ -1.67
CRNKL1-203ENST00000490258 ITPKAP23677 461 aa4.63□□□□□ -1.67
CRNKL1-203ENST00000490258 RXRBP28702 533 aa4.63□□□□□ -1.67
CRNKL1-203ENST00000490258 SPRED3Q2MJR0 410 aa4.63□□□□□ -1.67
CRNKL1-203ENST00000490258 SGO2Q562F6 1265 aa4.63□□□□□ -1.67
CRNKL1-203ENST00000490258 EFCAB2Q5VUJ9 269 aa4.63□□□□□ -1.67
CRNKL1-203ENST00000490258 ZNF574Q6ZN55 896 aaPredicted RBP4.63□□□□□ -1.67
CRNKL1-203ENST00000490258 TMC7Q7Z402 723 aa4.63□□□□□ -1.67
CRNKL1-203ENST00000490258 BCL7CQ8WUZ0 217 aaPredicted RBP4.63□□□□□ -1.67
CRNKL1-203ENST00000490258 RELTQ969Z4 430 aa4.63□□□□□ -1.67
CRNKL1-203ENST00000490258 TRIM56Q9BRZ2 755 aaKnown RBP4.63□□□□□ -1.67
CRNKL1-203ENST00000490258 RC3H2Q9HBD1 1191 aaKnown RBP4.63□□□□□ -1.67
CRNKL1-203ENST00000490258 SEC31BQ9NQW1 1179 aa4.63□□□□□ -1.67
CRNKL1-203ENST00000490258 FAM53CQ9NYF3 392 aa4.63□□□□□ -1.67
CRNKL1-203ENST00000490258 ZC3H7BQ9UGR2 993 aaKnown RBP4.63□□□□□ -1.67
CRNKL1-203ENST00000490258 NOP58Q9Y2X3 529 aaKnown RBP4.63□□□□□ -1.67
CRNKL1-203ENST00000490258 TMEM131LA2VDJ0 1609 aa4.63□□□□□ -1.67
CRNKL1-203ENST00000490258 ZBED9Q6R2W3 1325 aa4.63□□□□□ -1.67
CRNKL1-203ENST00000490258 NUP155O75694 1391 aa4.63□□□□□ -1.67
CRNKL1-203ENST00000490258 ROCK1Q13464 1354 aa4.63□□□□□ -1.67
CRNKL1-203ENST00000490258 NPATQ14207 1427 aa4.63□□□□□ -1.67
CRNKL1-203ENST00000490258 KIAA1107Q9UPP5 1409 aa4.63□□□□□ -1.67
CRNKL1-203ENST00000490258 MLH3Q9UHC1 1453 aa4.62□□□□□ -1.67
CRNKL1-203ENST00000490258 NEXMIFQ5QGS0 1516 aa4.62□□□□□ -1.67
CRNKL1-203ENST00000490258 LOC100289279A0A1B0GTE1 492 aa4.62□□□□□ -1.67
CRNKL1-203ENST00000490258 MEGF11A6BM72 1044 aa4.62□□□□□ -1.67
CRNKL1-203ENST00000490258 KIF3BO15066 747 aa4.62□□□□□ -1.67
CRNKL1-203ENST00000490258 CDC25BP30305 580 aa4.62□□□□□ -1.67
CRNKL1-203ENST00000490258 ZNF326Q5BKZ1 582 aaKnown RBP4.62□□□□□ -1.67
CRNKL1-203ENST00000490258 FDX2Q6P4F2 183 aa4.62□□□□□ -1.67
CRNKL1-203ENST00000490258 C20orf173Q96LM9 149 aa4.62□□□□□ -1.67
CRNKL1-203ENST00000490258 TMPRSS13Q9BYE2 586 aa4.62□□□□□ -1.67
CRNKL1-203ENST00000490258 RNF208Q9H0X6 261 aa4.62□□□□□ -1.67
CRNKL1-203ENST00000490258 ZNF576Q9H609 170 aa4.62□□□□□ -1.67
CRNKL1-203ENST00000490258 NPHS2Q9NP85 383 aa4.62□□□□□ -1.67
CRNKL1-203ENST00000490258 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.62□□□□□ -1.67
CRNKL1-203ENST00000490258 BRPF3Q9ULD4 1205 aa4.62□□□□□ -1.67
CRNKL1-203ENST00000490258 WASHC2AQ641Q2 1341 aa4.62□□□□□ -1.67
CRNKL1-203ENST00000490258 TONSLQ96HA7 1378 aa4.62□□□□□ -1.67
CRNKL1-203ENST00000490258 SMG6Q86US8 1419 aaKnown RBP4.62□□□□□ -1.67
CRNKL1-203ENST00000490258 ERVK-7P63135 1459 aa4.62□□□□□ -1.67
CRNKL1-203ENST00000490258 EIF1AYO14602 144 aaKnown RBP4.61□□□□□ -1.67
CRNKL1-203ENST00000490258 TREHO43280 583 aa4.61□□□□□ -1.67
CRNKL1-203ENST00000490258 NDUFB5O43674 189 aa4.61□□□□□ -1.67
CRNKL1-203ENST00000490258 B3GALT4O96024 378 aa4.61□□□□□ -1.67
CRNKL1-203ENST00000490258 PDIA4P13667 645 aaKnown RBP4.61□□□□□ -1.67
CRNKL1-203ENST00000490258 GGT6Q6P531 493 aa4.61□□□□□ -1.67
CRNKL1-203ENST00000490258 WFDC3Q8IUB2 231 aa4.61□□□□□ -1.67
CRNKL1-203ENST00000490258 TRAIPQ9BWF2 469 aa4.61□□□□□ -1.67
CRNKL1-203ENST00000490258 DNAJC25Q9H1X3 360 aa4.61□□□□□ -1.67
CRNKL1-203ENST00000490258 DISP3Q9P2K9 1392 aa4.61□□□□□ -1.67
CRNKL1-203ENST00000490258 SPATA31D1Q6ZQQ2 1576 aa4.61□□□□□ -1.67
CRNKL1-203ENST00000490258 A0A096LPE4 126 aa4.6□□□□□ -1.67
CRNKL1-203ENST00000490258 FAM95CA0A1B0GW59 222 aa4.6□□□□□ -1.67
CRNKL1-203ENST00000490258 A0A1W2PPZ6 126 aa4.6□□□□□ -1.67
CRNKL1-203ENST00000490258 CPNE3O75131 537 aaKnown RBP4.6□□□□□ -1.67
CRNKL1-203ENST00000490258 HOXA5P20719 270 aa4.6□□□□□ -1.67
CRNKL1-203ENST00000490258 CEBPAP49715 358 aaPredicted RBP4.6□□□□□ -1.67
CRNKL1-203ENST00000490258 NLRP12P59046 1061 aa4.6□□□□□ -1.67
CRNKL1-203ENST00000490258 HNRNPUQ00839 825 aaKnown RBP eCLIP4.6□□□□□ -1.67
CRNKL1-203ENST00000490258 FMR1Q06787 632 aaKnown RBP eCLIP4.6□□□□□ -1.67
CRNKL1-203ENST00000490258 C19orf57Q0VDD7 668 aa4.6□□□□□ -1.67
CRNKL1-203ENST00000490258 FAAP100Q0VG06 881 aa4.6□□□□□ -1.67
CRNKL1-203ENST00000490258 GRM2Q14416 872 aa4.6□□□□□ -1.67
CRNKL1-203ENST00000490258 NFKBIBQ15653 356 aa4.6□□□□□ -1.67
CRNKL1-203ENST00000490258 MLANAQ16655 118 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms