RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 CRCPO75575 148 aa9.83□□□□□ -0.84
LSAMP-205ENST00000490035 SLFN12Q8IYM2 578 aa9.83□□□□□ -0.84
LSAMP-205ENST00000490035 ERBB4Q15303 1308 aa9.83□□□□□ -0.84
LSAMP-205ENST00000490035 BACH1O14867 736 aa9.83□□□□□ -0.84
LSAMP-205ENST00000490035 TMED8Q6PL24 325 aaPredicted RBP9.83□□□□□ -0.84
LSAMP-205ENST00000490035 NFATC2IPQ8NCF5 419 aa9.83□□□□□ -0.84
LSAMP-205ENST00000490035 ARHGEF35A5YM69 484 aa9.82□□□□□ -0.84
LSAMP-205ENST00000490035 SLC27A2O14975 620 aa9.82□□□□□ -0.84
LSAMP-205ENST00000490035 ZNF202O95125 648 aa9.82□□□□□ -0.84
LSAMP-205ENST00000490035 MAN1A1P33908 653 aa9.82□□□□□ -0.84
LSAMP-205ENST00000490035 TFCP2Q12800 502 aa9.82□□□□□ -0.84
LSAMP-205ENST00000490035 SYT10Q6XYQ8 523 aa9.82□□□□□ -0.84
LSAMP-205ENST00000490035 CNPY4Q8N129 248 aa9.82□□□□□ -0.84
LSAMP-205ENST00000490035 LAD1O00515 517 aa9.82□□□□□ -0.84
LSAMP-205ENST00000490035 PFDN6O15212 129 aa9.82□□□□□ -0.84
LSAMP-205ENST00000490035 ARID5AQ03989 594 aa9.82□□□□□ -0.84
LSAMP-205ENST00000490035 TNNI3KQ59H18 835 aa9.82□□□□□ -0.84
LSAMP-205ENST00000490035 NCAPGQ9BPX3 1015 aa9.82□□□□□ -0.84
LSAMP-205ENST00000490035 ARPP21Q9UBL0 812 aaPredicted RBP9.82□□□□□ -0.84
LSAMP-205ENST00000490035 FPGT-TNNI3KV9GXZ4 949 aa9.82□□□□□ -0.84
LSAMP-205ENST00000490035 SOS2Q07890 1332 aaPredicted RBP9.82□□□□□ -0.84
LSAMP-205ENST00000490035 CALCRLQ16602 461 aa9.82□□□□□ -0.84
LSAMP-205ENST00000490035 DENND2CQ68D51 928 aa9.82□□□□□ -0.84
LSAMP-205ENST00000490035 BBOF1Q8ND07 529 aa9.82□□□□□ -0.84
LSAMP-205ENST00000490035 MYRIPQ8NFW9 859 aa9.82□□□□□ -0.84
LSAMP-205ENST00000490035 BZW2Q9Y6E2 419 aaKnown RBP9.82□□□□□ -0.84
LSAMP-205ENST00000490035 SAMD9Q5K651 1589 aa9.82□□□□□ -0.84
LSAMP-205ENST00000490035 CASQ2O14958 399 aaPredicted RBP9.82□□□□□ -0.84
LSAMP-205ENST00000490035 SGSM2O43147 1006 aa9.82□□□□□ -0.84
LSAMP-205ENST00000490035 TEX11Q8IYF3 940 aa9.82□□□□□ -0.84
LSAMP-205ENST00000490035 MUM1L1Q5H9M0 696 aa9.82□□□□□ -0.84
LSAMP-205ENST00000490035 ZNF790Q6PG37 636 aa9.82□□□□□ -0.84
LSAMP-205ENST00000490035 KRT5P13647 590 aa9.82□□□□□ -0.84
LSAMP-205ENST00000490035 PPP1R9BQ96SB3 815 aa9.82□□□□□ -0.84
LSAMP-205ENST00000490035 NUF2Q9BZD4 464 aa9.82□□□□□ -0.84
LSAMP-205ENST00000490035 CUEDC2Q9H467 287 aa9.82□□□□□ -0.84
LSAMP-205ENST00000490035 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.82□□□□□ -0.84
LSAMP-205ENST00000490035 POLR2DO15514 142 aaKnown RBP9.82□□□□□ -0.84
LSAMP-205ENST00000490035 MTHFSDQ2M296 383 aaKnown RBP9.82□□□□□ -0.84
LSAMP-205ENST00000490035 TTC38Q5R3I4 469 aa9.82□□□□□ -0.84
LSAMP-205ENST00000490035 CACYBPQ9HB71 228 aaKnown RBP9.82□□□□□ -0.84
LSAMP-205ENST00000490035 WWC3Q9ULE0 1092 aa9.82□□□□□ -0.84
LSAMP-205ENST00000490035 ATP10AO60312 1499 aa9.82□□□□□ -0.84
LSAMP-205ENST00000490035 HAUS8Q9BT25 410 aa9.81□□□□□ -0.84
LSAMP-205ENST00000490035 PRDM10Q9NQV6 1147 aa9.81□□□□□ -0.84
LSAMP-205ENST00000490035 SLC5A4Q9NY91 659 aa9.81□□□□□ -0.84
LSAMP-205ENST00000490035 NDUFAB1O14561 156 aa9.81□□□□□ -0.84
LSAMP-205ENST00000490035 HIBADHP31937 336 aaKnown RBP9.81□□□□□ -0.84
LSAMP-205ENST00000490035 PICALMQ13492 652 aa9.81□□□□□ -0.84
LSAMP-205ENST00000490035 ZC3H15Q8WU90 426 aaKnown RBP9.81□□□□□ -0.84
LSAMP-205ENST00000490035 HVCN1Q96D96 273 aa9.81□□□□□ -0.84
LSAMP-205ENST00000490035 IQSEC3Q9UPP2 1182 aaPredicted RBP9.81□□□□□ -0.84
LSAMP-205ENST00000490035 CTNND2Q9UQB3 1225 aa9.81□□□□□ -0.84
LSAMP-205ENST00000490035 TMEM110-MUSTN1A8MSY1 372 aa9.81□□□□□ -0.84
LSAMP-205ENST00000490035 MYL1P05976 194 aa9.81□□□□□ -0.84
LSAMP-205ENST00000490035 ALDH1B1P30837 517 aa9.81□□□□□ -0.84
LSAMP-205ENST00000490035 TRAPPC3LQ5T215 181 aa9.81□□□□□ -0.84
LSAMP-205ENST00000490035 KRT26Q7Z3Y9 468 aa9.81□□□□□ -0.84
LSAMP-205ENST00000490035 LARP6Q9BRS8 491 aaKnown RBP9.81□□□□□ -0.84
LSAMP-205ENST00000490035 RAPGEF1Q13905 1077 aa9.81□□□□□ -0.84
LSAMP-205ENST00000490035 SDCCAG8Q86SQ7 713 aaPredicted RBP9.81□□□□□ -0.84
LSAMP-205ENST00000490035 FAN1Q9Y2M0 1017 aa9.81□□□□□ -0.84
LSAMP-205ENST00000490035 ATP10DQ9P241 1426 aa9.81□□□□□ -0.84
LSAMP-205ENST00000490035 PLS1Q14651 629 aa9.81□□□□□ -0.84
LSAMP-205ENST00000490035 WHAMMP3Q1A5X7 153 aa9.81□□□□□ -0.84
LSAMP-205ENST00000490035 CCDC25Q86WR0 208 aa9.81□□□□□ -0.84
LSAMP-205ENST00000490035 LMNB2Q03252 620 aa9.81□□□□□ -0.84
LSAMP-205ENST00000490035 ADALQ6DHV7 355 aa9.81□□□□□ -0.84
LSAMP-205ENST00000490035 CEP57Q86XR8 500 aa9.81□□□□□ -0.84
LSAMP-205ENST00000490035 EXOC8Q8IYI6 725 aa9.81□□□□□ -0.84
LSAMP-205ENST00000490035 IPO4Q8TEX9 1081 aaKnown RBP9.81□□□□□ -0.84
LSAMP-205ENST00000490035 CALR3Q96L12 384 aaKnown RBP9.81□□□□□ -0.84
LSAMP-205ENST00000490035 MED4Q9NPJ6 270 aa9.81□□□□□ -0.84
LSAMP-205ENST00000490035 ZNF75DP51815 510 aa9.81□□□□□ -0.84
LSAMP-205ENST00000490035 ADCY7P51828 1080 aa9.81□□□□□ -0.84
LSAMP-205ENST00000490035 FANCCQ00597 558 aa9.81□□□□□ -0.84
LSAMP-205ENST00000490035 NONOQ15233 471 aaKnown RBP eCLIP9.81□□□□□ -0.84
LSAMP-205ENST00000490035 VCX3AQ9NNX9 186 aa9.81□□□□□ -0.84
LSAMP-205ENST00000490035 MYO1AQ9UBC5 1043 aa9.81□□□□□ -0.84
LSAMP-205ENST00000490035 GOLGA8CPA6NN73 597 aa9.8□□□□□ -0.84
LSAMP-205ENST00000490035 CCDC38Q502W7 563 aa9.8□□□□□ -0.84
LSAMP-205ENST00000490035 UBE2Q2Q8WVN8 375 aa9.8□□□□□ -0.84
LSAMP-205ENST00000490035 CAPZA3Q96KX2 299 aa9.8□□□□□ -0.84
LSAMP-205ENST00000490035 METTL14Q9HCE5 456 aaKnown RBP9.8□□□□□ -0.84
LSAMP-205ENST00000490035 INPP5BP32019 993 aa9.8□□□□□ -0.84
LSAMP-205ENST00000490035 PDZD4Q76G19 769 aaPredicted RBP9.8□□□□□ -0.84
LSAMP-205ENST00000490035 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.8□□□□□ -0.84
LSAMP-205ENST00000490035 BUB1BO60566 1050 aaPredicted RBP9.8□□□□□ -0.84
LSAMP-205ENST00000490035 GCP02774 474 aa9.8□□□□□ -0.84
LSAMP-205ENST00000490035 LETM2Q2VYF4 491 aa9.8□□□□□ -0.84
LSAMP-205ENST00000490035 LRRC2Q9BYS8 371 aa9.8□□□□□ -0.84
LSAMP-205ENST00000490035 HOMER3Q9NSC5 361 aa9.8□□□□□ -0.84
LSAMP-205ENST00000490035 PCDHB13Q9Y5F0 798 aa9.8□□□□□ -0.84
LSAMP-205ENST00000490035 CD2APQ9Y5K6 639 aa9.8□□□□□ -0.84
LSAMP-205ENST00000490035 TACC3Q9Y6A5 838 aa9.8□□□□□ -0.84
LSAMP-205ENST00000490035 TTC37Q6PGP7 1564 aa9.8□□□□□ -0.84
LSAMP-205ENST00000490035 BIRC3Q13489 604 aa9.8□□□□□ -0.84
LSAMP-205ENST00000490035 RPS6KA1Q15418 735 aa9.8□□□□□ -0.84
LSAMP-205ENST00000490035 CEP85LQ5SZL2 805 aa9.8□□□□□ -0.84
LSAMP-205ENST00000490035 SFMBT2Q5VUG0 894 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms