RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 AKAP2Q9Y2D5 859 aa5.17□□□□□ -1.58
DEPDC1-204ENST00000489862 OTOL1A6NHN0 477 aaPredicted RBP5.16□□□□□ -1.58
DEPDC1-204ENST00000489862 ZNF862O60290 1169 aa5.16□□□□□ -1.58
DEPDC1-204ENST00000489862 MAPK8P45983 427 aa5.16□□□□□ -1.58
DEPDC1-204ENST00000489862 ABHD4Q8TB40 342 aa5.16□□□□□ -1.58
DEPDC1-204ENST00000489862 STK35Q8TDR2 534 aa5.16□□□□□ -1.58
DEPDC1-204ENST00000489862 MENTQ9BUN1 341 aa5.16□□□□□ -1.58
DEPDC1-204ENST00000489862 TMEM39AQ9NV64 488 aa5.16□□□□□ -1.58
DEPDC1-204ENST00000489862 TMPRSS2O15393 492 aa5.15□□□□□ -1.58
DEPDC1-204ENST00000489862 GSTP1P09211 210 aaKnown RBP5.15□□□□□ -1.58
DEPDC1-204ENST00000489862 RBM25P49756 843 aaKnown RBP5.15□□□□□ -1.58
DEPDC1-204ENST00000489862 HMGA2P52926 109 aa5.15□□□□□ -1.58
DEPDC1-204ENST00000489862 PLP2Q04941 152 aa5.15□□□□□ -1.58
DEPDC1-204ENST00000489862 GZF1Q9H116 711 aaPredicted RBP5.15□□□□□ -1.58
DEPDC1-204ENST00000489862 SYNGAP1Q96PV0 1343 aa5.15□□□□□ -1.59
DEPDC1-204ENST00000489862 MFAP1P55081 439 aaKnown RBP5.15□□□□□ -1.59
DEPDC1-204ENST00000489862 PPP2R3AQ06190 1150 aa5.15□□□□□ -1.59
DEPDC1-204ENST00000489862 PDZD3Q86UT5 571 aa5.15□□□□□ -1.59
DEPDC1-204ENST00000489862 KCNB2Q92953 911 aa5.15□□□□□ -1.59
DEPDC1-204ENST00000489862 TEPSINQ96N21 525 aa5.15□□□□□ -1.59
DEPDC1-204ENST00000489862 SORCS2Q96PQ0 1159 aa5.15□□□□□ -1.59
DEPDC1-204ENST00000489862 FANCD2OSQ96PS1 177 aa5.15□□□□□ -1.59
DEPDC1-204ENST00000489862 WWC3Q9ULE0 1092 aa5.15□□□□□ -1.59
DEPDC1-204ENST00000489862 SLFN14P0C7P3 912 aa5.14□□□□□ -1.59
DEPDC1-204ENST00000489862 XRCC5P13010 732 aaKnown RBP5.14□□□□□ -1.59
DEPDC1-204ENST00000489862 DLG4P78352 724 aa5.14□□□□□ -1.59
DEPDC1-204ENST00000489862 KCNA1Q09470 495 aa5.14□□□□□ -1.59
DEPDC1-204ENST00000489862 SULF2Q8IWU5 870 aa5.14□□□□□ -1.59
DEPDC1-204ENST00000489862 C3orf58Q8NDZ4 430 aa5.14□□□□□ -1.59
DEPDC1-204ENST00000489862 DUSP23Q9BVJ7 150 aa5.14□□□□□ -1.59
DEPDC1-204ENST00000489862 GTF2IRD1Q9UHL9 959 aa5.14□□□□□ -1.59
DEPDC1-204ENST00000489862 SEMA7AO75326 666 aa5.13□□□□□ -1.59
DEPDC1-204ENST00000489862 CLCN7P51798 805 aa5.13□□□□□ -1.59
DEPDC1-204ENST00000489862 ID3Q02535 119 aa5.13□□□□□ -1.59
DEPDC1-204ENST00000489862 FMR1Q06787 632 aaKnown RBP eCLIP5.13□□□□□ -1.59
DEPDC1-204ENST00000489862 KIF4BQ2VIQ3 1234 aa5.13□□□□□ -1.59
DEPDC1-204ENST00000489862 MPRIPQ6WCQ1 1025 aa5.13□□□□□ -1.59
DEPDC1-204ENST00000489862 ZSCAN29Q8IWY8 852 aaPredicted RBP5.13□□□□□ -1.59
DEPDC1-204ENST00000489862 SLC16A11Q8NCK7 471 aa5.13□□□□□ -1.59
DEPDC1-204ENST00000489862 ASB16Q96NS5 453 aa5.13□□□□□ -1.59
DEPDC1-204ENST00000489862 OSBPL7Q9BZF2 842 aa5.13□□□□□ -1.59
DEPDC1-204ENST00000489862 CARS2Q9HA77 564 aaKnown RBP5.13□□□□□ -1.59
DEPDC1-204ENST00000489862 DISC1Q9NRI5 854 aa5.13□□□□□ -1.59
DEPDC1-204ENST00000489862 SEMA3GQ9NS98 782 aa5.13□□□□□ -1.59
DEPDC1-204ENST00000489862 C19orf73Q9NVV2 129 aa5.13□□□□□ -1.59
DEPDC1-204ENST00000489862 KCTD3Q9Y597 815 aa5.13□□□□□ -1.59
DEPDC1-204ENST00000489862 PCDHGC5Q9Y5F6 944 aa5.13□□□□□ -1.59
DEPDC1-204ENST00000489862 NISCHQ9Y2I1 1504 aa5.13□□□□□ -1.59
DEPDC1-204ENST00000489862 ADAMTS20P59510 1910 aa5.12□□□□□ -1.59
DEPDC1-204ENST00000489862 GRIN3BO60391 1043 aa5.12□□□□□ -1.59
DEPDC1-204ENST00000489862 LEFTY1O75610 366 aa5.12□□□□□ -1.59
DEPDC1-204ENST00000489862 ARNTP27540 789 aa5.12□□□□□ -1.59
DEPDC1-204ENST00000489862 TTLL4Q14679 1199 aa5.12□□□□□ -1.59
DEPDC1-204ENST00000489862 MAP1SQ66K74 1059 aaPredicted RBP5.12□□□□□ -1.59
DEPDC1-204ENST00000489862 TPTE2Q6XPS3 522 aa5.12□□□□□ -1.59
DEPDC1-204ENST00000489862 ATXN3LQ9H3M9 355 aa5.12□□□□□ -1.59
DEPDC1-204ENST00000489862 KRT82Q9NSB4 513 aa5.12□□□□□ -1.59
DEPDC1-204ENST00000489862 FBXO24O75426 580 aa5.12□□□□□ -1.59
DEPDC1-204ENST00000489862 HCLS1P14317 486 aaPredicted RBP5.12□□□□□ -1.59
DEPDC1-204ENST00000489862 NME2P22392 152 aa5.12□□□□□ -1.59
DEPDC1-204ENST00000489862 TMCO4Q5TGY1 634 aa5.12□□□□□ -1.59
DEPDC1-204ENST00000489862 NPAS4Q8IUM7 802 aa5.12□□□□□ -1.59
DEPDC1-204ENST00000489862 NECAB3Q96P71 396 aaPredicted RBP5.12□□□□□ -1.59
DEPDC1-204ENST00000489862 CBX8Q9HC52 389 aa5.12□□□□□ -1.59
DEPDC1-204ENST00000489862 IGF2BP3O00425 579 aaKnown RBP eCLIP5.11□□□□□ -1.59
DEPDC1-204ENST00000489862 RNGTTO60942 597 aaKnown RBP5.11□□□□□ -1.59
DEPDC1-204ENST00000489862 PAGE1O75459 146 aa5.11□□□□□ -1.59
DEPDC1-204ENST00000489862 FSHBP01225 129 aa5.11□□□□□ -1.59
DEPDC1-204ENST00000489862 SP8Q8IXZ3 490 aa5.11□□□□□ -1.59
DEPDC1-204ENST00000489862 SMYD4Q8IYR2 804 aaPredicted RBP5.11□□□□□ -1.59
DEPDC1-204ENST00000489862 GRIN3AQ8TCU5 1115 aa5.11□□□□□ -1.59
DEPDC1-204ENST00000489862 GPBAR1Q8TDU6 330 aa5.11□□□□□ -1.59
DEPDC1-204ENST00000489862 FBF1Q8TES7 1133 aa5.11□□□□□ -1.59
DEPDC1-204ENST00000489862 SLITRK6Q9H5Y7 841 aa5.11□□□□□ -1.59
DEPDC1-204ENST00000489862 SHROOM4Q9ULL8 1493 aa5.11□□□□□ -1.59
DEPDC1-204ENST00000489862 ZC3H12DA2A288 527 aaKnown RBP5.1□□□□□ -1.59
DEPDC1-204ENST00000489862 ENC1O14682 589 aa5.1□□□□□ -1.59
DEPDC1-204ENST00000489862 BMP6P22004 513 aa5.1□□□□□ -1.59
DEPDC1-204ENST00000489862 GSTT1P30711 240 aa5.1□□□□□ -1.59
DEPDC1-204ENST00000489862 ZNF252P-AS1Q0IIN9 211 aa5.1□□□□□ -1.59
DEPDC1-204ENST00000489862 ALG1LQ6GMV1 187 aa5.1□□□□□ -1.59
DEPDC1-204ENST00000489862 SPACA3Q8IXA5 215 aa5.1□□□□□ -1.59
DEPDC1-204ENST00000489862 CNOT11Q9UKZ1 510 aaKnown RBP5.1□□□□□ -1.59
DEPDC1-204ENST00000489862 NEFMP07197 916 aa5.09□□□□□ -1.59
DEPDC1-204ENST00000489862 P4HBP07237 508 aaKnown RBP5.09□□□□□ -1.59
DEPDC1-204ENST00000489862 ZC3H12AQ5D1E8 599 aaKnown RBP5.09□□□□□ -1.59
DEPDC1-204ENST00000489862 RASIP1Q5U651 963 aa5.09□□□□□ -1.59
DEPDC1-204ENST00000489862 TMEM132EQ6IEE7 984 aa5.09□□□□□ -1.59
DEPDC1-204ENST00000489862 EMILIN2Q9BXX0 1053 aa5.09□□□□□ -1.59
DEPDC1-204ENST00000489862 SRCIN1Q9C0H9 1055 aa5.09□□□□□ -1.59
DEPDC1-204ENST00000489862 PCOLCE2Q9UKZ9 415 aa5.09□□□□□ -1.59
DEPDC1-204ENST00000489862 CSADQ9Y600 493 aa5.09□□□□□ -1.59
DEPDC1-204ENST00000489862 GNAT3A8MTJ3 354 aa5.08□□□□□ -1.6
DEPDC1-204ENST00000489862 PEX10O60683 326 aa5.08□□□□□ -1.6
DEPDC1-204ENST00000489862 TNFRSF1AP19438 455 aa5.08□□□□□ -1.6
DEPDC1-204ENST00000489862 HNRNPUQ00839 825 aaKnown RBP eCLIP5.08□□□□□ -1.6
DEPDC1-204ENST00000489862 ATP2B2Q01814 1243 aa5.08□□□□□ -1.6
DEPDC1-204ENST00000489862 FEZF2Q8TBJ5 459 aa5.08□□□□□ -1.6
DEPDC1-204ENST00000489862 ISL2Q96A47 359 aa5.08□□□□□ -1.6
DEPDC1-204ENST00000489862 ACSBG1Q96GR2 724 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms