RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 GPRC5DQ9NZD1 345 aa16.64■□□□□ 0.25
VPS26A-205ENST00000489656 SERPINB13Q9UIV8 391 aa16.64■□□□□ 0.25
VPS26A-205ENST00000489656 CIZ1Q9ULV3 898 aaPredicted RBP16.64■□□□□ 0.25
VPS26A-205ENST00000489656 CNTNAP1P78357 1384 aa16.64■□□□□ 0.25
VPS26A-205ENST00000489656 ERICH2A1L162 156 aa16.63■□□□□ 0.25
VPS26A-205ENST00000489656 H7C1D1 291 aa16.63■□□□□ 0.25
VPS26A-205ENST00000489656 PDIA3P30101 505 aaKnown RBP16.63■□□□□ 0.25
VPS26A-205ENST00000489656 RCAN1P53805 252 aa16.63■□□□□ 0.25
VPS26A-205ENST00000489656 WTAPQ15007 396 aa16.63■□□□□ 0.25
VPS26A-205ENST00000489656 SLC4A8Q2Y0W8 1093 aa16.63■□□□□ 0.25
VPS26A-205ENST00000489656 SH3BP5LQ7L8J4 393 aa16.63■□□□□ 0.25
VPS26A-205ENST00000489656 ZSCAN10Q96SZ4 725 aaPredicted RBP16.63■□□□□ 0.25
VPS26A-205ENST00000489656 UBAC1Q9BSL1 405 aa16.63■□□□□ 0.25
VPS26A-205ENST00000489656 PI4KBQ9UBF8 816 aa16.63■□□□□ 0.25
VPS26A-205ENST00000489656 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.63■□□□□ 0.25
VPS26A-205ENST00000489656 WDR90Q96KV7 1748 aa16.62■□□□□ 0.25
VPS26A-205ENST00000489656 KLF18A0A0U1RQI7 1052 aa16.62■□□□□ 0.25
VPS26A-205ENST00000489656 DDTLA6NHG4 134 aaPredicted RBP16.62■□□□□ 0.25
VPS26A-205ENST00000489656 TCP10Q12799 353 aa16.62■□□□□ 0.25
VPS26A-205ENST00000489656 NBPF9Q3BBW0 867 aa16.62■□□□□ 0.25
VPS26A-205ENST00000489656 FOXP4Q8IVH2 680 aaPredicted RBP16.62■□□□□ 0.25
VPS26A-205ENST00000489656 CCDC83Q8IWF9 413 aa16.62■□□□□ 0.25
VPS26A-205ENST00000489656 ZNF444Q8N0Y2 327 aaPredicted RBP16.62■□□□□ 0.25
VPS26A-205ENST00000489656 SPRYD3Q8NCJ5 442 aa16.62■□□□□ 0.25
VPS26A-205ENST00000489656 SLC44A5Q8NCS7 719 aa16.62■□□□□ 0.25
VPS26A-205ENST00000489656 ANKS1AQ92625 1134 aa16.62■□□□□ 0.25
VPS26A-205ENST00000489656 SLKQ9H2G2 1235 aaPredicted RBP16.62■□□□□ 0.25
VPS26A-205ENST00000489656 BRPF3Q9ULD4 1205 aa16.62■□□□□ 0.25
VPS26A-205ENST00000489656 TNKSO95271 1327 aa16.62■□□□□ 0.25
VPS26A-205ENST00000489656 CLRN2A0PK11 232 aa16.61■□□□□ 0.25
VPS26A-205ENST00000489656 TSPY2A6NKD2 308 aa16.61■□□□□ 0.25
VPS26A-205ENST00000489656 SHMT1P34896 483 aa16.61■□□□□ 0.25
VPS26A-205ENST00000489656 TFAP4Q01664 338 aa16.61■□□□□ 0.25
VPS26A-205ENST00000489656 TNFAIP1Q13829 316 aa16.61■□□□□ 0.25
VPS26A-205ENST00000489656 KIF4BQ2VIQ3 1234 aa16.61■□□□□ 0.25
VPS26A-205ENST00000489656 APOA5Q6Q788 366 aa16.61■□□□□ 0.25
VPS26A-205ENST00000489656 ENAHQ8N8S7 591 aaPredicted RBP16.61■□□□□ 0.25
VPS26A-205ENST00000489656 NEDD1Q8NHV4 660 aa16.61■□□□□ 0.25
VPS26A-205ENST00000489656 LLPHQ9BRT6 129 aaKnown RBP16.61■□□□□ 0.25
VPS26A-205ENST00000489656 CCDC69A6NI79 296 aa16.6■□□□□ 0.25
VPS26A-205ENST00000489656 TCP10L2B9ZVM9 353 aa16.6■□□□□ 0.25
VPS26A-205ENST00000489656 EGFRP00533 1210 aa16.6■□□□□ 0.25
VPS26A-205ENST00000489656 TSPY3P0CV98 308 aa16.6■□□□□ 0.25
VPS26A-205ENST00000489656 TSPY8P0CW00 308 aa16.6■□□□□ 0.25
VPS26A-205ENST00000489656 TNNI2P48788 182 aa16.6■□□□□ 0.25
VPS26A-205ENST00000489656 SCRN1Q12765 414 aa16.6■□□□□ 0.25
VPS26A-205ENST00000489656 FAM47AQ5JRC9 791 aa16.6■□□□□ 0.25
VPS26A-205ENST00000489656 SAMD7Q7Z3H4 446 aa16.6■□□□□ 0.25
VPS26A-205ENST00000489656 DGKHQ86XP1 1220 aa16.6■□□□□ 0.25
VPS26A-205ENST00000489656 NECAB1Q8N987 351 aa16.6■□□□□ 0.25
VPS26A-205ENST00000489656 ZKSCAN3Q9BRR0 538 aa16.6■□□□□ 0.25
VPS26A-205ENST00000489656 SENP2Q9HC62 589 aa16.6■□□□□ 0.25
VPS26A-205ENST00000489656 CHMP5Q9NZZ3 219 aa16.6■□□□□ 0.25
VPS26A-205ENST00000489656 PGAP2Q9UHJ9 254 aa16.6■□□□□ 0.25
VPS26A-205ENST00000489656 HERC5Q9UII4 1024 aaKnown RBP16.6■□□□□ 0.25
VPS26A-205ENST00000489656 HPS5Q9UPZ3 1129 aa16.6■□□□□ 0.25
VPS26A-205ENST00000489656 SRCAPQ6ZRS2 3230 aa16.59■□□□□ 0.25
VPS26A-205ENST00000489656 MYH15Q9Y2K3 1946 aa16.59■□□□□ 0.25
VPS26A-205ENST00000489656 GOLGA8BA8MQT2 603 aa16.59■□□□□ 0.25
VPS26A-205ENST00000489656 NOVP48745 357 aa16.59■□□□□ 0.25
VPS26A-205ENST00000489656 STK3Q13188 491 aa16.59■□□□□ 0.25
VPS26A-205ENST00000489656 TBC1D10BQ4KMP7 808 aaPredicted RBP16.59■□□□□ 0.25
VPS26A-205ENST00000489656 RCSD1Q6JBY9 416 aa16.59■□□□□ 0.25
VPS26A-205ENST00000489656 NFXL1Q6ZNB6 911 aa16.59■□□□□ 0.25
VPS26A-205ENST00000489656 ZSCAN29Q8IWY8 852 aaPredicted RBP16.59■□□□□ 0.25
VPS26A-205ENST00000489656 L3MBTL3Q96JM7 780 aaPredicted RBP16.59■□□□□ 0.25
VPS26A-205ENST00000489656 CCDC17Q96LX7 622 aa16.59■□□□□ 0.25
VPS26A-205ENST00000489656 DNAJC18Q9H819 358 aa16.59■□□□□ 0.25
VPS26A-205ENST00000489656 VEZTQ9HBM0 779 aa16.59■□□□□ 0.25
VPS26A-205ENST00000489656 IL17RBQ9NRM6 502 aa16.59■□□□□ 0.25
VPS26A-205ENST00000489656 UTRNP46939 3433 aa16.59■□□□□ 0.25
VPS26A-205ENST00000489656 ZBTB43O43298 467 aa16.58■□□□□ 0.24
VPS26A-205ENST00000489656 TBC1D12O60347 775 aa16.58■□□□□ 0.24
VPS26A-205ENST00000489656 DDNO94850 711 aaPredicted RBP16.58■□□□□ 0.24
VPS26A-205ENST00000489656 PPP2R5BQ15173 497 aa16.58■□□□□ 0.24
VPS26A-205ENST00000489656 IFIT1BQ5T764 474 aaKnown RBP16.58■□□□□ 0.24
VPS26A-205ENST00000489656 TATDN1Q6P1N9 297 aa16.58■□□□□ 0.24
VPS26A-205ENST00000489656 SYNE3Q6ZMZ3 975 aa16.58■□□□□ 0.24
VPS26A-205ENST00000489656 CRACR2BQ8N4Y2 399 aaPredicted RBP16.58■□□□□ 0.24
VPS26A-205ENST00000489656 SMARCC2Q8TAQ2 1214 aa16.58■□□□□ 0.24
VPS26A-205ENST00000489656 CSRNP1Q96S65 589 aa16.58■□□□□ 0.24
VPS26A-205ENST00000489656 SMC3Q9UQE7 1217 aa16.58■□□□□ 0.24
VPS26A-205ENST00000489656 SLC12A7Q9Y666 1083 aa16.58■□□□□ 0.24
VPS26A-205ENST00000489656 DOCK1Q14185 1865 aa16.58■□□□□ 0.24
VPS26A-205ENST00000489656 IGKV6D-41A0A0C4DH26 115 aa16.57■□□□□ 0.24
VPS26A-205ENST00000489656 DHX16O60231 1041 aaKnown RBP16.57■□□□□ 0.24
VPS26A-205ENST00000489656 LMOD1P29536 600 aaPredicted RBP16.57■□□□□ 0.24
VPS26A-205ENST00000489656 MAP3K10Q02779 954 aa16.57■□□□□ 0.24
VPS26A-205ENST00000489656 RBM26Q5T8P6 1007 aaKnown RBP16.57■□□□□ 0.24
VPS26A-205ENST00000489656 DPY19L2Q6NUT2 758 aa16.57■□□□□ 0.24
VPS26A-205ENST00000489656 APOBEC3FQ8IUX4 373 aaKnown RBP16.57■□□□□ 0.24
VPS26A-205ENST00000489656 ZNF654Q8IZM8 581 aa16.57■□□□□ 0.24
VPS26A-205ENST00000489656 TRPM4Q8TD43 1214 aa16.57■□□□□ 0.24
VPS26A-205ENST00000489656 ADARB2Q9NS39 739 aaKnown RBP16.57■□□□□ 0.24
VPS26A-205ENST00000489656 HACL1Q9UJ83 578 aa16.57■□□□□ 0.24
VPS26A-205ENST00000489656 TCHHQ07283 1943 aa16.57■□□□□ 0.24
VPS26A-205ENST00000489656 PITPNM2Q9BZ72 1349 aa16.56■□□□□ 0.24
VPS26A-205ENST00000489656 NMT2O60551 498 aa16.56■□□□□ 0.24
VPS26A-205ENST00000489656 DDAH1O94760 285 aa16.56■□□□□ 0.24
VPS26A-205ENST00000489656 CALM1P0DP23 149 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms