RNA–Protein interactions for RNA: ENST00000489617.5

CDK18-211, Transcript of cyclin dependent kinase 18, humanhuman

TSL 1 (best)

Gene CDK18, Length 3,190 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK18-211ENST00000489617 CCDC125Q86Z20 511 aa13.19□□□□□ -0.3
CDK18-211ENST00000489617 TSPAN18Q96SJ8 248 aa13.19□□□□□ -0.3
CDK18-211ENST00000489617 RIMBP2O15034 1052 aa13.18□□□□□ -0.3
CDK18-211ENST00000489617 RTN2O75298 545 aa13.18□□□□□ -0.3
CDK18-211ENST00000489617 CCDC144BQ3MJ40 725 aa13.18□□□□□ -0.3
CDK18-211ENST00000489617 CC2D1AQ6P1N0 951 aaPredicted RBP13.18□□□□□ -0.3
CDK18-211ENST00000489617 AACSQ86V21 672 aa13.18□□□□□ -0.3
CDK18-211ENST00000489617 C2CD5Q86YS7 1000 aa13.18□□□□□ -0.3
CDK18-211ENST00000489617 CCDC144CPQ8IYA2 1237 aa13.18□□□□□ -0.3
CDK18-211ENST00000489617 UBR3Q6ZT12 1888 aa13.18□□□□□ -0.3
CDK18-211ENST00000489617 AFDNP55196 1824 aaKnown RBP13.18□□□□□ -0.3
CDK18-211ENST00000489617 PAX3P23760 479 aa13.18□□□□□ -0.3
CDK18-211ENST00000489617 LUZP1Q86V48 1076 aa13.18□□□□□ -0.3
CDK18-211ENST00000489617 CHCHD3Q9NX63 227 aaKnown RBP13.18□□□□□ -0.3
CDK18-211ENST00000489617 MTMR6Q9Y217 621 aa13.18□□□□□ -0.3
CDK18-211ENST00000489617 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.18□□□□□ -0.3
CDK18-211ENST00000489617 LARGE1O95461 756 aa13.18□□□□□ -0.3
CDK18-211ENST00000489617 JAKMIP1Q96N16 626 aaKnown RBP13.18□□□□□ -0.3
CDK18-211ENST00000489617 ANKIB1Q9P2G1 1089 aa13.18□□□□□ -0.3
CDK18-211ENST00000489617 OATP04181 439 aa13.17□□□□□ -0.3
CDK18-211ENST00000489617 DPEP1P16444 411 aa13.17□□□□□ -0.3
CDK18-211ENST00000489617 USP4Q13107 963 aa13.17□□□□□ -0.3
CDK18-211ENST00000489617 DDX46Q7L014 1031 aaKnown RBP13.17□□□□□ -0.3
CDK18-211ENST00000489617 C3orf20Q8ND61 904 aa13.17□□□□□ -0.3
CDK18-211ENST00000489617 ATL2Q8NHH9 583 aa13.17□□□□□ -0.3
CDK18-211ENST00000489617 ZKSCAN4Q969J2 545 aaPredicted RBP13.17□□□□□ -0.3
CDK18-211ENST00000489617 A1CFQ9NQ94 594 aaKnown RBP13.17□□□□□ -0.3
CDK18-211ENST00000489617 LMCD1Q9NZU5 365 aa13.17□□□□□ -0.3
CDK18-211ENST00000489617 AKAP2Q9Y2D5 859 aa13.17□□□□□ -0.3
CDK18-211ENST00000489617 CLNS1AP54105 237 aaKnown RBP13.17□□□□□ -0.3
CDK18-211ENST00000489617 TRIM28Q13263 835 aaKnown RBP13.17□□□□□ -0.3
CDK18-211ENST00000489617 CCDC152Q4G0S7 254 aa13.17□□□□□ -0.3
CDK18-211ENST00000489617 CRACR2AQ9BSW2 395 aa13.17□□□□□ -0.3
CDK18-211ENST00000489617 L2HGDHQ9H9P8 463 aa13.17□□□□□ -0.3
CDK18-211ENST00000489617 CLIP2Q9UDT6 1046 aa13.17□□□□□ -0.3
CDK18-211ENST00000489617 BCS1LQ9Y276 419 aa13.17□□□□□ -0.3
CDK18-211ENST00000489617 ENO4A6NNW6 628 aa13.16□□□□□ -0.3
CDK18-211ENST00000489617 RFX5P48382 616 aaPredicted RBP13.16□□□□□ -0.3
CDK18-211ENST00000489617 SLC5A9Q2M3M2 681 aa13.16□□□□□ -0.3
CDK18-211ENST00000489617 MYLK4Q86YV6 388 aaPredicted RBP13.16□□□□□ -0.3
CDK18-211ENST00000489617 RUFY2Q8WXA3 655 aa13.16□□□□□ -0.3
CDK18-211ENST00000489617 FBXW7Q969H0 707 aa13.16□□□□□ -0.3
CDK18-211ENST00000489617 EAF2Q96CJ1 260 aaPredicted RBP13.16□□□□□ -0.3
CDK18-211ENST00000489617 ELP1O95163 1332 aa13.16□□□□□ -0.3
CDK18-211ENST00000489617 C4AP0C0L4 1744 aa13.16□□□□□ -0.3
CDK18-211ENST00000489617 TXNRD3Q86VQ6 643 aa13.16□□□□□ -0.3
CDK18-211ENST00000489617 DRAXINQ8NBI3 349 aaPredicted RBP13.16□□□□□ -0.3
CDK18-211ENST00000489617 ZSCAN31Q96LW9 406 aaPredicted RBP13.16□□□□□ -0.3
CDK18-211ENST00000489617 DBNDD2Q9BQY9 259 aa13.16□□□□□ -0.3
CDK18-211ENST00000489617 FHDC1Q9C0D6 1143 aaPredicted RBP13.16□□□□□ -0.3
CDK18-211ENST00000489617 TMEM165Q9HC07 324 aa13.16□□□□□ -0.3
CDK18-211ENST00000489617 SH2B1Q9NRF2 756 aaPredicted RBP13.16□□□□□ -0.3
CDK18-211ENST00000489617 PCDHGA4Q9Y5G9 962 aa13.16□□□□□ -0.3
CDK18-211ENST00000489617 CYP46A1Q9Y6A2 500 aa13.16□□□□□ -0.3
CDK18-211ENST00000489617 PECAM1P16284 738 aaPredicted RBP13.16□□□□□ -0.3
CDK18-211ENST00000489617 VPS53Q5VIR6 699 aa13.16□□□□□ -0.3
CDK18-211ENST00000489617 HHATQ5VTY9 493 aa13.16□□□□□ -0.3
CDK18-211ENST00000489617 MYSM1Q5VVJ2 828 aa13.16□□□□□ -0.3
CDK18-211ENST00000489617 NYXQ9GZU5 481 aa13.16□□□□□ -0.3
CDK18-211ENST00000489617 TUBGCP6Q96RT7 1819 aa13.15□□□□□ -0.3
CDK18-211ENST00000489617 POLA2Q14181 598 aa13.15□□□□□ -0.3
CDK18-211ENST00000489617 PRPF40BQ6NWY9 871 aaKnown RBP13.15□□□□□ -0.3
CDK18-211ENST00000489617 IQCA1Q86XH1 822 aa13.15□□□□□ -0.3
CDK18-211ENST00000489617 ZNF396Q96N95 335 aaPredicted RBP13.15□□□□□ -0.3
CDK18-211ENST00000489617 IRX2Q9BZI1 471 aaPredicted RBP13.15□□□□□ -0.3
CDK18-211ENST00000489617 PPFIA4O75335 1185 aa13.15□□□□□ -0.3
CDK18-211ENST00000489617 GLRX3O76003 335 aaKnown RBP13.15□□□□□ -0.3
CDK18-211ENST00000489617 GYG1P46976 350 aa13.15□□□□□ -0.3
CDK18-211ENST00000489617 PDCD2Q16342 344 aaPredicted RBP13.15□□□□□ -0.3
CDK18-211ENST00000489617 MAP3K11Q16584 847 aa13.15□□□□□ -0.3
CDK18-211ENST00000489617 ATG9AQ7Z3C6 839 aa13.15□□□□□ -0.3
CDK18-211ENST00000489617 LRRC8AQ8IWT6 810 aa13.15□□□□□ -0.3
CDK18-211ENST00000489617 FLAD1Q8NFF5 587 aa13.15□□□□□ -0.3
CDK18-211ENST00000489617 FAM200AQ8TCP9 573 aa13.15□□□□□ -0.3
CDK18-211ENST00000489617 FUT8Q9BYC5 575 aa13.15□□□□□ -0.3
CDK18-211ENST00000489617 TSPYL2Q9H2G4 693 aaPredicted RBP13.15□□□□□ -0.3
CDK18-211ENST00000489617 BOLA2Q9H3K6 86 aa13.15□□□□□ -0.3
CDK18-211ENST00000489617 PDE11AQ9HCR9 933 aa13.15□□□□□ -0.3
CDK18-211ENST00000489617 ARFGAP3Q9NP61 516 aa13.15□□□□□ -0.3
CDK18-211ENST00000489617 C6orf229H3BNL8 230 aa13.14□□□□□ -0.31
CDK18-211ENST00000489617 RPS8P62241 208 aaKnown RBP13.14□□□□□ -0.31
CDK18-211ENST00000489617 ADCK5Q3MIX3 580 aa13.14□□□□□ -0.31
CDK18-211ENST00000489617 CCDC93Q567U6 631 aa13.14□□□□□ -0.31
CDK18-211ENST00000489617 HSP90AB4PQ58FF6 505 aa13.14□□□□□ -0.31
CDK18-211ENST00000489617 NUP62CLQ9H1M0 184 aa13.14□□□□□ -0.31
CDK18-211ENST00000489617 FAN1Q9Y2M0 1017 aa13.14□□□□□ -0.31
CDK18-211ENST00000489617 IGHMBP2P38935 993 aaKnown RBP13.14□□□□□ -0.31
CDK18-211ENST00000489617 KRT85P78386 507 aa13.14□□□□□ -0.31
CDK18-211ENST00000489617 CHRNDQ07001 517 aa13.14□□□□□ -0.31
CDK18-211ENST00000489617 CAMK4Q16566 473 aa13.14□□□□□ -0.31
CDK18-211ENST00000489617 LARP1BQ659C4 914 aaKnown RBP13.14□□□□□ -0.31
CDK18-211ENST00000489617 NECAB1Q8N987 351 aa13.14□□□□□ -0.31
CDK18-211ENST00000489617 DDX11Q96FC9 970 aa13.14□□□□□ -0.31
CDK18-211ENST00000489617 MTFR1LQ9H019 292 aa13.14□□□□□ -0.31
CDK18-211ENST00000489617 N4BP1O75113 896 aaKnown RBP13.14□□□□□ -0.31
CDK18-211ENST00000489617 EIF3JO75822 258 aaKnown RBP13.14□□□□□ -0.31
CDK18-211ENST00000489617 SETSIPP0DME0 302 aa13.14□□□□□ -0.31
CDK18-211ENST00000489617 ZKSCAN1P17029 563 aaPredicted RBP13.14□□□□□ -0.31
CDK18-211ENST00000489617 MAGEA8P43361 318 aa13.14□□□□□ -0.31
CDK18-211ENST00000489617 ZNF75DP51815 510 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms