RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 ZBTB7BO15156 539 aaPredicted RBP23.72■■□□□ 1.39
APTX-229ENST00000489583 ZAP70P43403 619 aa23.72■■□□□ 1.39
APTX-229ENST00000489583 TRMT44Q8IYL2 757 aaKnown RBP23.72■■□□□ 1.39
APTX-229ENST00000489583 ANKLE1Q8NAG6 615 aa23.72■■□□□ 1.39
APTX-229ENST00000489583 SOCS4Q8WXH5 440 aa23.72■■□□□ 1.39
APTX-229ENST00000489583 NUDT12Q9BQG2 462 aa23.72■■□□□ 1.39
APTX-229ENST00000489583 SAP30BPQ9UHR5 308 aaKnown RBP23.72■■□□□ 1.39
APTX-229ENST00000489583 RPTORQ8N122 1335 aa23.72■■□□□ 1.39
APTX-229ENST00000489583 GDF11O95390 407 aa23.71■■□□□ 1.39
APTX-229ENST00000489583 MAPK4P31152 587 aa23.71■■□□□ 1.39
APTX-229ENST00000489583 HOXA7P31268 230 aaPredicted RBP23.71■■□□□ 1.39
APTX-229ENST00000489583 PAWRQ96IZ0 340 aaKnown RBP23.71■■□□□ 1.39
APTX-229ENST00000489583 FEZ1Q99689 392 aa23.71■■□□□ 1.39
APTX-229ENST00000489583 MORF4L1Q9UBU8 362 aa23.71■■□□□ 1.39
APTX-229ENST00000489583 HERVK_113P62684 666 aa23.7■■□□□ 1.38
APTX-229ENST00000489583 MAP3K12Q12852 859 aa23.7■■□□□ 1.38
APTX-229ENST00000489583 TMED8Q6PL24 325 aaPredicted RBP23.7■■□□□ 1.38
APTX-229ENST00000489583 ERC1Q8IUD2 1116 aa23.7■■□□□ 1.38
APTX-229ENST00000489583 C1orf115Q9H7X2 142 aa23.7■■□□□ 1.38
APTX-229ENST00000489583 ATAD5Q96QE3 1844 aa23.69■■□□□ 1.38
APTX-229ENST00000489583 CYP2B6P20813 491 aa23.69■■□□□ 1.38
APTX-229ENST00000489583 HNRNPUQ00839 825 aaKnown RBP eCLIP23.69■■□□□ 1.38
APTX-229ENST00000489583 RRP1BQ14684 758 aaKnown RBP23.69■■□□□ 1.38
APTX-229ENST00000489583 USP17L2Q6R6M4 530 aa23.69■■□□□ 1.38
APTX-229ENST00000489583 P2RX7Q99572 595 aaKnown RBP23.69■■□□□ 1.38
APTX-229ENST00000489583 NBPF3Q9H094 633 aa23.69■■□□□ 1.38
APTX-229ENST00000489583 CRISPLD2Q9H0B8 497 aa23.69■■□□□ 1.38
APTX-229ENST00000489583 CCDC8Q9H0W5 538 aaPredicted RBP23.69■■□□□ 1.38
APTX-229ENST00000489583 ZBTB21Q9ULJ3 1066 aa23.69■■□□□ 1.38
APTX-229ENST00000489583 LOC285556D6RIA3 1793 aa23.68■■□□□ 1.38
APTX-229ENST00000489583 A0A1W2PPC1 479 aa23.68■■□□□ 1.38
APTX-229ENST00000489583 GLRX3O76003 335 aaKnown RBP23.68■■□□□ 1.38
APTX-229ENST00000489583 TTC6Q86TZ1 520 aa23.68■■□□□ 1.38
APTX-229ENST00000489583 PAGR1Q9BTK6 254 aa23.68■■□□□ 1.38
APTX-229ENST00000489583 CABP5Q9NP86 173 aa23.68■■□□□ 1.38
APTX-229ENST00000489583 NOP58Q9Y2X3 529 aaKnown RBP23.68■■□□□ 1.38
APTX-229ENST00000489583 MAST2Q6P0Q8 1798 aa23.68■■□□□ 1.38
APTX-229ENST00000489583 USP14P54578 494 aa23.67■■□□□ 1.38
APTX-229ENST00000489583 CCNA1P78396 465 aa23.67■■□□□ 1.38
APTX-229ENST00000489583 HSP90AB4PQ58FF6 505 aa23.67■■□□□ 1.38
APTX-229ENST00000489583 ADGRA1Q86SQ6 560 aa23.67■■□□□ 1.38
APTX-229ENST00000489583 METTL16Q86W50 562 aaKnown RBP23.67■■□□□ 1.38
APTX-229ENST00000489583 MAGEB6Q8N7X4 407 aa23.67■■□□□ 1.38
APTX-229ENST00000489583 PIH1D3Q9NQM4 214 aaKnown RBP23.67■■□□□ 1.38
APTX-229ENST00000489583 GJD2Q9UKL4 321 aa23.67■■□□□ 1.38
APTX-229ENST00000489583 ZKSCAN1P17029 563 aaPredicted RBP23.66■■□□□ 1.38
APTX-229ENST00000489583 DYNLL1P63167 89 aaKnown RBP23.66■■□□□ 1.38
APTX-229ENST00000489583 MIGA1Q8NAN2 632 aa23.66■■□□□ 1.38
APTX-229ENST00000489583 SERPINB13Q9UIV8 391 aa23.66■■□□□ 1.38
APTX-229ENST00000489583 DBNLQ9UJU6 430 aaKnown RBP23.66■■□□□ 1.38
APTX-229ENST00000489583 GH2P01242 217 aa23.65■■□□□ 1.38
APTX-229ENST00000489583 XRCC5P13010 732 aaKnown RBP23.65■■□□□ 1.38
APTX-229ENST00000489583 RGS2P41220 211 aa23.65■■□□□ 1.38
APTX-229ENST00000489583 ERVK-9P63128 1117 aa23.65■■□□□ 1.38
APTX-229ENST00000489583 ERVK-24P63145 666 aa23.65■■□□□ 1.38
APTX-229ENST00000489583 RAB3GAP1Q15042 981 aa23.65■■□□□ 1.38
APTX-229ENST00000489583 TRIOBPQ9H2D6 2365 aa23.64■■□□□ 1.38
APTX-229ENST00000489583 PRKAR2AP13861 404 aaKnown RBP23.64■■□□□ 1.37
APTX-229ENST00000489583 TTF1Q15361 905 aaPredicted RBP23.64■■□□□ 1.37
APTX-229ENST00000489583 CERKLQ49MI3 558 aaPredicted RBP23.64■■□□□ 1.37
APTX-229ENST00000489583 WDR78Q5VTH9 848 aa23.64■■□□□ 1.37
APTX-229ENST00000489583 AACSQ86V21 672 aa23.64■■□□□ 1.37
APTX-229ENST00000489583 C7orf61Q8IZ16 206 aa23.64■■□□□ 1.37
APTX-229ENST00000489583 C11orf49Q9H6J7 331 aa23.64■■□□□ 1.37
APTX-229ENST00000489583 DNAJC18Q9H819 358 aa23.64■■□□□ 1.37
APTX-229ENST00000489583 USP17L15C9J2P7 530 aa23.63■■□□□ 1.37
APTX-229ENST00000489583 USP17L13C9JLJ4 530 aa23.63■■□□□ 1.37
APTX-229ENST00000489583 USP17L11C9JVI0 530 aa23.63■■□□□ 1.37
APTX-229ENST00000489583 USP17L18D6R9N7 530 aa23.63■■□□□ 1.37
APTX-229ENST00000489583 USP17L22D6RA61 530 aa23.63■■□□□ 1.37
APTX-229ENST00000489583 USP17L17D6RBQ6 530 aa23.63■■□□□ 1.37
APTX-229ENST00000489583 USP17L19D6RCP7 530 aa23.63■■□□□ 1.37
APTX-229ENST00000489583 USP17L20D6RJB6 530 aa23.63■■□□□ 1.37
APTX-229ENST00000489583 POLR3DP05423 398 aaPredicted RBP23.63■■□□□ 1.37
APTX-229ENST00000489583 MS4A1P11836 297 aa23.63■■□□□ 1.37
APTX-229ENST00000489583 USP17L24Q0WX57 530 aa23.63■■□□□ 1.37
APTX-229ENST00000489583 ZYXQ15942 572 aaKnown RBP23.63■■□□□ 1.37
APTX-229ENST00000489583 PLEKHH3Q7Z736 793 aa23.63■■□□□ 1.37
APTX-229ENST00000489583 TRIB2Q92519 343 aa23.63■■□□□ 1.37
APTX-229ENST00000489583 EAF2Q96CJ1 260 aaPredicted RBP23.63■■□□□ 1.37
APTX-229ENST00000489583 ABCB5Q2M3G0 1257 aa23.62■■□□□ 1.37
APTX-229ENST00000489583 DIS3LQ8TF46 1054 aaKnown RBP23.62■■□□□ 1.37
APTX-229ENST00000489583 EHD4Q9H223 541 aa23.62■■□□□ 1.37
APTX-229ENST00000489583 TLR7Q9NYK1 1049 aaKnown RBP23.62■■□□□ 1.37
APTX-229ENST00000489583 STAP2Q9UGK3 403 aa23.62■■□□□ 1.37
APTX-229ENST00000489583 IVNS1ABPQ9Y6Y0 642 aa23.62■■□□□ 1.37
APTX-229ENST00000489583 GPR142Q7Z601 462 aa23.61■■□□□ 1.37
APTX-229ENST00000489583 TXNRD2Q9NNW7 524 aa23.61■■□□□ 1.37
APTX-229ENST00000489583 EMILIN3Q9NT22 766 aa23.61■■□□□ 1.37
APTX-229ENST00000489583 RBPJLQ9UBG7 517 aa23.61■■□□□ 1.37
APTX-229ENST00000489583 RABGAP1Q9Y3P9 1069 aa23.61■■□□□ 1.37
APTX-229ENST00000489583 JAG1P78504 1218 aa23.6■■□□□ 1.37
APTX-229ENST00000489583 TRIM32Q13049 653 aa23.6■■□□□ 1.37
APTX-229ENST00000489583 APBA2Q99767 749 aa23.6■■□□□ 1.37
APTX-229ENST00000489583 CRNKL1Q9BZJ0 848 aaKnown RBP23.6■■□□□ 1.37
APTX-229ENST00000489583 MAGEB6P1A0A0J9YX57 407 aa23.59■■□□□ 1.37
APTX-229ENST00000489583 MFSD14CQ5VZR4 134 aa23.59■■□□□ 1.37
APTX-229ENST00000489583 TATDN1Q6P1N9 297 aa23.59■■□□□ 1.37
APTX-229ENST00000489583 OGDHLQ9ULD0 1010 aa23.59■■□□□ 1.37
APTX-229ENST00000489583 EXOC6BQ9Y2D4 811 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms