RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 SSH3Q8TE77 659 aa14.58□□□□□ -0.08
SFXN3-207ENST00000489434 PAWRQ96IZ0 340 aaKnown RBP14.58□□□□□ -0.08
SFXN3-207ENST00000489434 PALD1Q9ULE6 856 aa14.58□□□□□ -0.08
SFXN3-207ENST00000489434 FLT1P17948 1338 aa14.58□□□□□ -0.08
SFXN3-207ENST00000489434 RPTORQ8N122 1335 aa14.58□□□□□ -0.08
SFXN3-207ENST00000489434 SZT2Q5T011 3432 aa14.58□□□□□ -0.08
SFXN3-207ENST00000489434 CYP2E1P05181 493 aaPredicted RBP14.57□□□□□ -0.08
SFXN3-207ENST00000489434 METTL16Q86W50 562 aaKnown RBP14.57□□□□□ -0.08
SFXN3-207ENST00000489434 TRMT44Q8IYL2 757 aaKnown RBP14.57□□□□□ -0.08
SFXN3-207ENST00000489434 GTF3C2Q8WUA4 911 aaPredicted RBP14.57□□□□□ -0.08
SFXN3-207ENST00000489434 SOCS4Q8WXH5 440 aa14.57□□□□□ -0.08
SFXN3-207ENST00000489434 NUDT12Q9BQG2 462 aa14.57□□□□□ -0.08
SFXN3-207ENST00000489434 GJD2Q9UKL4 321 aa14.57□□□□□ -0.08
SFXN3-207ENST00000489434 TNNQ9UQP3 1299 aa14.57□□□□□ -0.08
SFXN3-207ENST00000489434 IDH1O75874 414 aaKnown RBP14.56□□□□□ -0.08
SFXN3-207ENST00000489434 CYP7A1P22680 504 aa14.56□□□□□ -0.08
SFXN3-207ENST00000489434 MAPK4P31152 587 aa14.56□□□□□ -0.08
SFXN3-207ENST00000489434 HERVK_113P62684 666 aa14.56□□□□□ -0.08
SFXN3-207ENST00000489434 ITPRIPQ8IWB1 547 aa14.56□□□□□ -0.08
SFXN3-207ENST00000489434 P2RX7Q99572 595 aaKnown RBP14.56□□□□□ -0.08
SFXN3-207ENST00000489434 NBPF3Q9H094 633 aa14.56□□□□□ -0.08
SFXN3-207ENST00000489434 PRO3102Q9H379 93 aa14.56□□□□□ -0.08
SFXN3-207ENST00000489434 CWC22Q9HCG8 908 aaKnown RBP14.56□□□□□ -0.08
SFXN3-207ENST00000489434 SAP30BPQ9UHR5 308 aaKnown RBP14.56□□□□□ -0.08
SFXN3-207ENST00000489434 ZBTB21Q9ULJ3 1066 aa14.56□□□□□ -0.08
SFXN3-207ENST00000489434 FOCADQ5VW36 1801 aa14.55□□□□□ -0.08
SFXN3-207ENST00000489434 CDK5RAP2Q96SN8 1893 aa14.55□□□□□ -0.08
SFXN3-207ENST00000489434 GDF11O95390 407 aa14.55□□□□□ -0.08
SFXN3-207ENST00000489434 XRCC5P13010 732 aaKnown RBP14.55□□□□□ -0.08
SFXN3-207ENST00000489434 CYP2B6P20813 491 aa14.55□□□□□ -0.08
SFXN3-207ENST00000489434 ZAP70P43403 619 aa14.55□□□□□ -0.08
SFXN3-207ENST00000489434 USP5P45974 858 aa14.55□□□□□ -0.08
SFXN3-207ENST00000489434 TMED8Q6PL24 325 aaPredicted RBP14.55□□□□□ -0.08
SFXN3-207ENST00000489434 ADGRA1Q86SQ6 560 aa14.55□□□□□ -0.08
SFXN3-207ENST00000489434 FEZ1Q99689 392 aa14.55□□□□□ -0.08
SFXN3-207ENST00000489434 NOP58Q9Y2X3 529 aaKnown RBP14.55□□□□□ -0.08
SFXN3-207ENST00000489434 PRKAR2AP13861 404 aaKnown RBP14.54□□□□□ -0.08
SFXN3-207ENST00000489434 MAP3K12Q12852 859 aa14.54□□□□□ -0.08
SFXN3-207ENST00000489434 USP17L2Q6R6M4 530 aa14.54□□□□□ -0.08
SFXN3-207ENST00000489434 C1orf115Q9H7X2 142 aa14.54□□□□□ -0.08
SFXN3-207ENST00000489434 DNAJC18Q9H819 358 aa14.54□□□□□ -0.08
SFXN3-207ENST00000489434 PIH1D3Q9NQM4 214 aaKnown RBP14.54□□□□□ -0.08
SFXN3-207ENST00000489434 DBNLQ9UJU6 430 aaKnown RBP14.54□□□□□ -0.08
SFXN3-207ENST00000489434 SIPA1L1O43166 1804 aa14.54□□□□□ -0.08
SFXN3-207ENST00000489434 MYO5AQ9Y4I1 1855 aaKnown RBP14.54□□□□□ -0.08
SFXN3-207ENST00000489434 MYH1P12882 1939 aa14.53□□□□□ -0.08
SFXN3-207ENST00000489434 GLRX3O76003 335 aaKnown RBP14.53□□□□□ -0.08
SFXN3-207ENST00000489434 ZKSCAN1P17029 563 aaPredicted RBP14.53□□□□□ -0.08
SFXN3-207ENST00000489434 RGS2P41220 211 aa14.53□□□□□ -0.08
SFXN3-207ENST00000489434 ERVK-9P63128 1117 aa14.53□□□□□ -0.08
SFXN3-207ENST00000489434 ERVK-24P63145 666 aa14.53□□□□□ -0.08
SFXN3-207ENST00000489434 CCNA1P78396 465 aa14.53□□□□□ -0.08
SFXN3-207ENST00000489434 TTC6Q86TZ1 520 aa14.53□□□□□ -0.08
SFXN3-207ENST00000489434 ERC1Q8IUD2 1116 aa14.53□□□□□ -0.08
SFXN3-207ENST00000489434 C7orf61Q8IZ16 206 aa14.53□□□□□ -0.08
SFXN3-207ENST00000489434 DIS3LQ8TF46 1054 aaKnown RBP14.53□□□□□ -0.08
SFXN3-207ENST00000489434 TRIB2Q92519 343 aa14.53□□□□□ -0.08
SFXN3-207ENST00000489434 PAGR1Q9BTK6 254 aa14.53□□□□□ -0.08
SFXN3-207ENST00000489434 STAP2Q9UGK3 403 aa14.53□□□□□ -0.08
SFXN3-207ENST00000489434 SERPINB13Q9UIV8 391 aa14.53□□□□□ -0.08
SFXN3-207ENST00000489434 GH2P01242 217 aa14.52□□□□□ -0.09
SFXN3-207ENST00000489434 USP14P54578 494 aa14.52□□□□□ -0.09
SFXN3-207ENST00000489434 DYNLL1P63167 89 aaKnown RBP14.52□□□□□ -0.09
SFXN3-207ENST00000489434 JAG1P78504 1218 aa14.52□□□□□ -0.09
SFXN3-207ENST00000489434 TRIM32Q13049 653 aa14.52□□□□□ -0.09
SFXN3-207ENST00000489434 MAGEB6Q8N7X4 407 aa14.52□□□□□ -0.09
SFXN3-207ENST00000489434 MIGA1Q8NAN2 632 aa14.52□□□□□ -0.09
SFXN3-207ENST00000489434 CCDC8Q9H0W5 538 aaPredicted RBP14.52□□□□□ -0.09
SFXN3-207ENST00000489434 C11orf49Q9H6J7 331 aa14.52□□□□□ -0.09
SFXN3-207ENST00000489434 TXNRD2Q9NNW7 524 aa14.52□□□□□ -0.09
SFXN3-207ENST00000489434 EMILIN3Q9NT22 766 aa14.52□□□□□ -0.09
SFXN3-207ENST00000489434 RBPJLQ9UBG7 517 aa14.52□□□□□ -0.09
SFXN3-207ENST00000489434 OGDHLQ9ULD0 1010 aa14.52□□□□□ -0.09
SFXN3-207ENST00000489434 USP17L15C9J2P7 530 aa14.51□□□□□ -0.09
SFXN3-207ENST00000489434 USP17L13C9JLJ4 530 aa14.51□□□□□ -0.09
SFXN3-207ENST00000489434 USP17L11C9JVI0 530 aa14.51□□□□□ -0.09
SFXN3-207ENST00000489434 USP17L18D6R9N7 530 aa14.51□□□□□ -0.09
SFXN3-207ENST00000489434 USP17L22D6RA61 530 aa14.51□□□□□ -0.09
SFXN3-207ENST00000489434 USP17L17D6RBQ6 530 aa14.51□□□□□ -0.09
SFXN3-207ENST00000489434 USP17L19D6RCP7 530 aa14.51□□□□□ -0.09
SFXN3-207ENST00000489434 USP17L20D6RJB6 530 aa14.51□□□□□ -0.09
SFXN3-207ENST00000489434 USP17L24Q0WX57 530 aa14.51□□□□□ -0.09
SFXN3-207ENST00000489434 RAB3GAP1Q15042 981 aa14.51□□□□□ -0.09
SFXN3-207ENST00000489434 MAP3K21Q5TCX8 1036 aa14.51□□□□□ -0.09
SFXN3-207ENST00000489434 PLEKHH3Q7Z736 793 aa14.51□□□□□ -0.09
SFXN3-207ENST00000489434 EAF2Q96CJ1 260 aaPredicted RBP14.51□□□□□ -0.09
SFXN3-207ENST00000489434 EHD4Q9H223 541 aa14.51□□□□□ -0.09
SFXN3-207ENST00000489434 CABP5Q9NP86 173 aa14.51□□□□□ -0.09
SFXN3-207ENST00000489434 TLR7Q9NYK1 1049 aaKnown RBP14.51□□□□□ -0.09
SFXN3-207ENST00000489434 PLXNB2O15031 1838 aa14.5□□□□□ -0.09
SFXN3-207ENST00000489434 HNRNPUQ00839 825 aaKnown RBP eCLIP14.5□□□□□ -0.09
SFXN3-207ENST00000489434 ZYXQ15942 572 aaKnown RBP14.5□□□□□ -0.09
SFXN3-207ENST00000489434 ABCB5Q2M3G0 1257 aa14.5□□□□□ -0.09
SFXN3-207ENST00000489434 SHROOM1Q2M3G4 852 aaPredicted RBP14.5□□□□□ -0.09
SFXN3-207ENST00000489434 CERKLQ49MI3 558 aaPredicted RBP14.5□□□□□ -0.09
SFXN3-207ENST00000489434 HSP90AB4PQ58FF6 505 aa14.5□□□□□ -0.09
SFXN3-207ENST00000489434 TATDN1Q6P1N9 297 aa14.5□□□□□ -0.09
SFXN3-207ENST00000489434 GPR142Q7Z601 462 aa14.5□□□□□ -0.09
SFXN3-207ENST00000489434 AACSQ86V21 672 aa14.5□□□□□ -0.09
SFXN3-207ENST00000489434 APBA2Q99767 749 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms