RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 PPP4CP60510 307 aa11.46□□□□□ -0.57
SNX17-207ENST00000489402 POLA2Q14181 598 aa11.46□□□□□ -0.57
SNX17-207ENST00000489402 FOXP4Q8IVH2 680 aaPredicted RBP11.46□□□□□ -0.57
SNX17-207ENST00000489402 MAPKAPK5Q8IW41 473 aa11.46□□□□□ -0.57
SNX17-207ENST00000489402 DBNDD2Q9BQY9 259 aa11.46□□□□□ -0.57
SNX17-207ENST00000489402 WDR18Q9BV38 432 aa11.46□□□□□ -0.57
SNX17-207ENST00000489402 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.46□□□□□ -0.57
SNX17-207ENST00000489402 GINM1Q9NU53 330 aa11.46□□□□□ -0.57
SNX17-207ENST00000489402 TLR7Q9NYK1 1049 aaKnown RBP11.46□□□□□ -0.57
SNX17-207ENST00000489402 NDUFB9Q9Y6M9 179 aa11.46□□□□□ -0.57
SNX17-207ENST00000489402 C19orf81C9J6K1 198 aa11.45□□□□□ -0.58
SNX17-207ENST00000489402 CYP2E1P05181 493 aaPredicted RBP11.45□□□□□ -0.58
SNX17-207ENST00000489402 ATP8B2P98198 1209 aa11.45□□□□□ -0.58
SNX17-207ENST00000489402 TRIM32Q13049 653 aa11.45□□□□□ -0.58
SNX17-207ENST00000489402 POTEEQ6S8J3 1075 aa11.45□□□□□ -0.58
SNX17-207ENST00000489402 NECAB2Q7Z6G3 386 aa11.45□□□□□ -0.58
SNX17-207ENST00000489402 CERS3Q8IU89 383 aa11.45□□□□□ -0.58
SNX17-207ENST00000489402 FTSJ3Q8IY81 847 aaKnown RBP11.45□□□□□ -0.58
SNX17-207ENST00000489402 ANKLE1Q8NAG6 615 aa11.45□□□□□ -0.58
SNX17-207ENST00000489402 SSH3Q8TE77 659 aa11.45□□□□□ -0.58
SNX17-207ENST00000489402 ZNF512BQ96KM6 892 aaPredicted RBP11.45□□□□□ -0.58
SNX17-207ENST00000489402 CRISPLD2Q9H0B8 497 aa11.45□□□□□ -0.58
SNX17-207ENST00000489402 DNAJC18Q9H819 358 aa11.45□□□□□ -0.58
SNX17-207ENST00000489402 HMX1Q9NP08 348 aaPredicted RBP11.45□□□□□ -0.58
SNX17-207ENST00000489402 MORF4L1Q9UBU8 362 aa11.45□□□□□ -0.58
SNX17-207ENST00000489402 PALD1Q9ULE6 856 aa11.45□□□□□ -0.58
SNX17-207ENST00000489402 U3KPZ7 1027 aaPredicted RBP11.45□□□□□ -0.58
SNX17-207ENST00000489402 PLXNB2O15031 1838 aa11.44□□□□□ -0.58
SNX17-207ENST00000489402 RPTORQ8N122 1335 aa11.44□□□□□ -0.58
SNX17-207ENST00000489402 A0A1W2PPC1 479 aa11.44□□□□□ -0.58
SNX17-207ENST00000489402 USP17L10C9JJH3 530 aa11.44□□□□□ -0.58
SNX17-207ENST00000489402 GDF11O95390 407 aa11.44□□□□□ -0.58
SNX17-207ENST00000489402 HOXA7P31268 230 aaPredicted RBP11.44□□□□□ -0.58
SNX17-207ENST00000489402 ZAP70P43403 619 aa11.44□□□□□ -0.58
SNX17-207ENST00000489402 DYNLL1P63167 89 aaKnown RBP11.44□□□□□ -0.58
SNX17-207ENST00000489402 PDE3AQ14432 1141 aa11.44□□□□□ -0.58
SNX17-207ENST00000489402 CCAR1Q8IX12 1150 aaKnown RBP11.44□□□□□ -0.58
SNX17-207ENST00000489402 GTF3C2Q8WUA4 911 aaPredicted RBP11.44□□□□□ -0.58
SNX17-207ENST00000489402 SOCS4Q8WXH5 440 aa11.44□□□□□ -0.58
SNX17-207ENST00000489402 PAWRQ96IZ0 340 aaKnown RBP11.44□□□□□ -0.58
SNX17-207ENST00000489402 NUDT12Q9BQG2 462 aa11.44□□□□□ -0.58
SNX17-207ENST00000489402 PIH1D3Q9NQM4 214 aaKnown RBP11.44□□□□□ -0.58
SNX17-207ENST00000489402 GJD2Q9UKL4 321 aa11.44□□□□□ -0.58
SNX17-207ENST00000489402 ZBTB21Q9ULJ3 1066 aa11.44□□□□□ -0.58
SNX17-207ENST00000489402 MYH1P12882 1939 aa11.44□□□□□ -0.58
SNX17-207ENST00000489402 COL6A3P12111 3177 aa11.44□□□□□ -0.58
SNX17-207ENST00000489402 ALPK3Q96L96 1907 aa11.43□□□□□ -0.58
SNX17-207ENST00000489402 IDH1O75874 414 aaKnown RBP11.43□□□□□ -0.58
SNX17-207ENST00000489402 CYP7A1P22680 504 aa11.43□□□□□ -0.58
SNX17-207ENST00000489402 MAPK4P31152 587 aa11.43□□□□□ -0.58
SNX17-207ENST00000489402 USP5P45974 858 aa11.43□□□□□ -0.58
SNX17-207ENST00000489402 HERVK_113P62684 666 aa11.43□□□□□ -0.58
SNX17-207ENST00000489402 EVX2Q03828 476 aa11.43□□□□□ -0.58
SNX17-207ENST00000489402 METTL16Q86W50 562 aaKnown RBP11.43□□□□□ -0.58
SNX17-207ENST00000489402 ITPRIPQ8IWB1 547 aa11.43□□□□□ -0.58
SNX17-207ENST00000489402 TRMT44Q8IYL2 757 aaKnown RBP11.43□□□□□ -0.58
SNX17-207ENST00000489402 GPRC5AQ8NFJ5 357 aa11.43□□□□□ -0.58
SNX17-207ENST00000489402 P2RX7Q99572 595 aaKnown RBP11.43□□□□□ -0.58
SNX17-207ENST00000489402 PRO3102Q9H379 93 aa11.43□□□□□ -0.58
SNX17-207ENST00000489402 CWC22Q9HCG8 908 aaKnown RBP11.43□□□□□ -0.58
SNX17-207ENST00000489402 SAP30BPQ9UHR5 308 aaKnown RBP11.43□□□□□ -0.58
SNX17-207ENST00000489402 LAMA2P24043 3122 aaKnown RBP11.42□□□□□ -0.58
SNX17-207ENST00000489402 CYP2B6P20813 491 aa11.42□□□□□ -0.58
SNX17-207ENST00000489402 USP17L2Q6R6M4 530 aa11.42□□□□□ -0.58
SNX17-207ENST00000489402 DIS3LQ8TF46 1054 aaKnown RBP11.42□□□□□ -0.58
SNX17-207ENST00000489402 TRIB2Q92519 343 aa11.42□□□□□ -0.58
SNX17-207ENST00000489402 FEZ1Q99689 392 aa11.42□□□□□ -0.58
SNX17-207ENST00000489402 NBPF3Q9H094 633 aa11.42□□□□□ -0.58
SNX17-207ENST00000489402 CCDC8Q9H0W5 538 aaPredicted RBP11.42□□□□□ -0.58
SNX17-207ENST00000489402 DBNLQ9UJU6 430 aaKnown RBP11.42□□□□□ -0.58
SNX17-207ENST00000489402 NOP58Q9Y2X3 529 aaKnown RBP11.42□□□□□ -0.58
SNX17-207ENST00000489402 DDX60LQ5H9U9 1706 aaKnown RBP11.42□□□□□ -0.58
SNX17-207ENST00000489402 TRIOBPQ9H2D6 2365 aa11.42□□□□□ -0.58
SNX17-207ENST00000489402 XRCC5P13010 732 aaKnown RBP11.41□□□□□ -0.58
SNX17-207ENST00000489402 ZKSCAN1P17029 563 aaPredicted RBP11.41□□□□□ -0.58
SNX17-207ENST00000489402 ERVK-9P63128 1117 aa11.41□□□□□ -0.58
SNX17-207ENST00000489402 ERVK-24P63145 666 aa11.41□□□□□ -0.58
SNX17-207ENST00000489402 TMED8Q6PL24 325 aaPredicted RBP11.41□□□□□ -0.58
SNX17-207ENST00000489402 C7orf61Q8IZ16 206 aa11.41□□□□□ -0.58
SNX17-207ENST00000489402 MIER1Q8N108 512 aa11.41□□□□□ -0.58
SNX17-207ENST00000489402 MAGEB6Q8N7X4 407 aa11.41□□□□□ -0.58
SNX17-207ENST00000489402 EAF2Q96CJ1 260 aaPredicted RBP11.41□□□□□ -0.58
SNX17-207ENST00000489402 PAGR1Q9BTK6 254 aa11.41□□□□□ -0.58
SNX17-207ENST00000489402 ANTXR1Q9H6X2 564 aa11.41□□□□□ -0.58
SNX17-207ENST00000489402 TXNRD2Q9NNW7 524 aa11.41□□□□□ -0.58
SNX17-207ENST00000489402 GH2P01242 217 aa11.4□□□□□ -0.58
SNX17-207ENST00000489402 PRKAR2AP13861 404 aaKnown RBP11.4□□□□□ -0.58
SNX17-207ENST00000489402 RGS2P41220 211 aa11.4□□□□□ -0.58
SNX17-207ENST00000489402 MNX1P50219 401 aaPredicted RBP11.4□□□□□ -0.58
SNX17-207ENST00000489402 USP14P54578 494 aa11.4□□□□□ -0.58
SNX17-207ENST00000489402 MAP3K12Q12852 859 aa11.4□□□□□ -0.58
SNX17-207ENST00000489402 GPR142Q7Z601 462 aa11.4□□□□□ -0.58
SNX17-207ENST00000489402 TTC6Q86TZ1 520 aa11.4□□□□□ -0.58
SNX17-207ENST00000489402 ERC1Q8IUD2 1116 aa11.4□□□□□ -0.58
SNX17-207ENST00000489402 MIGA1Q8NAN2 632 aa11.4□□□□□ -0.58
SNX17-207ENST00000489402 EHD4Q9H223 541 aa11.4□□□□□ -0.58
SNX17-207ENST00000489402 C11orf49Q9H6J7 331 aa11.4□□□□□ -0.58
SNX17-207ENST00000489402 EMILIN3Q9NT22 766 aa11.4□□□□□ -0.58
SNX17-207ENST00000489402 RBPJLQ9UBG7 517 aa11.4□□□□□ -0.58
SNX17-207ENST00000489402 STAP2Q9UGK3 403 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 224.8 ms