RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 GDF11O95390 407 aa22.51■■□□□ 1.19
HDAC6-231ENST00000488905 BACE1P56817 501 aa22.51■■□□□ 1.19
HDAC6-231ENST00000488905 JAG1P78504 1218 aa22.51■■□□□ 1.19
HDAC6-231ENST00000488905 PAK6Q9NQU5 681 aaPredicted RBP22.51■■□□□ 1.19
HDAC6-231ENST00000488905 LAMA3Q16787 3333 aa22.51■■□□□ 1.19
HDAC6-231ENST00000488905 IDH1O75874 414 aaKnown RBP22.5■■□□□ 1.19
HDAC6-231ENST00000488905 HLA-DOAP06340 250 aa22.5■■□□□ 1.19
HDAC6-231ENST00000488905 DYNLL1P63167 89 aaKnown RBP22.5■■□□□ 1.19
HDAC6-231ENST00000488905 IRX3P78415 501 aaPredicted RBP22.5■■□□□ 1.19
HDAC6-231ENST00000488905 SHROOM1Q2M3G4 852 aaPredicted RBP22.5■■□□□ 1.19
HDAC6-231ENST00000488905 CEP85Q6P2H3 762 aa22.5■■□□□ 1.19
HDAC6-231ENST00000488905 FOXP4Q8IVH2 680 aaPredicted RBP22.5■■□□□ 1.19
HDAC6-231ENST00000488905 GINM1Q9NU53 330 aa22.5■■□□□ 1.19
HDAC6-231ENST00000488905 TMOD4Q9NZQ9 345 aa22.5■■□□□ 1.19
HDAC6-231ENST00000488905 SAP30BPQ9UHR5 308 aaKnown RBP22.5■■□□□ 1.19
HDAC6-231ENST00000488905 ZBTB21Q9ULJ3 1066 aa22.5■■□□□ 1.19
HDAC6-231ENST00000488905 CYP7A1P22680 504 aa22.49■■□□□ 1.19
HDAC6-231ENST00000488905 CHRDL2Q6WN34 429 aa22.49■■□□□ 1.19
HDAC6-231ENST00000488905 DEFB118Q96PH6 123 aa22.49■■□□□ 1.19
HDAC6-231ENST00000488905 MORF4L1Q9UBU8 362 aa22.49■■□□□ 1.19
HDAC6-231ENST00000488905 CAPN2P17655 700 aa22.48■■□□□ 1.19
HDAC6-231ENST00000488905 HOXA7P31268 230 aaPredicted RBP22.48■■□□□ 1.19
HDAC6-231ENST00000488905 CERS3Q8IU89 383 aa22.48■■□□□ 1.19
HDAC6-231ENST00000488905 MIGA1Q8NAN2 632 aa22.48■■□□□ 1.19
HDAC6-231ENST00000488905 MYH8P13535 1937 aa22.47■■□□□ 1.19
HDAC6-231ENST00000488905 C19orf81C9J6K1 198 aa22.47■■□□□ 1.19
HDAC6-231ENST00000488905 USP17L10C9JJH3 530 aa22.47■■□□□ 1.19
HDAC6-231ENST00000488905 HMGCRP04035 888 aa22.47■■□□□ 1.19
HDAC6-231ENST00000488905 ERC1Q8IUD2 1116 aa22.47■■□□□ 1.19
HDAC6-231ENST00000488905 MIER1Q8N108 512 aa22.47■■□□□ 1.19
HDAC6-231ENST00000488905 MAGEB6Q8N7X4 407 aa22.47■■□□□ 1.19
HDAC6-231ENST00000488905 EXOC6BQ9Y2D4 811 aa22.47■■□□□ 1.19
HDAC6-231ENST00000488905 NDUFB9Q9Y6M9 179 aa22.47■■□□□ 1.19
HDAC6-231ENST00000488905 TFRCP02786 760 aaKnown RBP22.46■■□□□ 1.19
HDAC6-231ENST00000488905 HERVK_113P62684 666 aa22.46■■□□□ 1.19
HDAC6-231ENST00000488905 CRISPLD2Q9H0B8 497 aa22.46■■□□□ 1.19
HDAC6-231ENST00000488905 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.46■■□□□ 1.19
HDAC6-231ENST00000488905 GJD2Q9UKL4 321 aa22.46■■□□□ 1.19
HDAC6-231ENST00000488905 ZBED9Q6R2W3 1325 aa22.46■■□□□ 1.19
HDAC6-231ENST00000488905 USP5P45974 858 aa22.45■■□□□ 1.18
HDAC6-231ENST00000488905 AACSQ86V21 672 aa22.45■■□□□ 1.18
HDAC6-231ENST00000488905 P2RX7Q99572 595 aaKnown RBP22.45■■□□□ 1.18
HDAC6-231ENST00000488905 ANTXR1Q9H6X2 564 aa22.45■■□□□ 1.18
HDAC6-231ENST00000488905 NR2E3Q9Y5X4 410 aa22.45■■□□□ 1.18
HDAC6-231ENST00000488905 MAP3K12Q12852 859 aa22.44■■□□□ 1.18
HDAC6-231ENST00000488905 TMED8Q6PL24 325 aaPredicted RBP22.44■■□□□ 1.18
HDAC6-231ENST00000488905 PANK1Q8TE04 598 aa22.44■■□□□ 1.18
HDAC6-231ENST00000488905 TXNRD2Q9NNW7 524 aa22.44■■□□□ 1.18
HDAC6-231ENST00000488905 FRMPD3Q5JV73 1810 aa22.43■■□□□ 1.18
HDAC6-231ENST00000488905 PEX10O60683 326 aa22.43■■□□□ 1.18
HDAC6-231ENST00000488905 GH2P01242 217 aa22.43■■□□□ 1.18
HDAC6-231ENST00000488905 EHD4Q9H223 541 aa22.43■■□□□ 1.18
HDAC6-231ENST00000488905 RBM27Q9P2N5 1060 aaKnown RBP22.43■■□□□ 1.18
HDAC6-231ENST00000488905 SERPINB13Q9UIV8 391 aa22.43■■□□□ 1.18
HDAC6-231ENST00000488905 MYH7P12883 1935 aa22.43■■□□□ 1.18
HDAC6-231ENST00000488905 TRIM32Q13049 653 aa22.42■■□□□ 1.18
HDAC6-231ENST00000488905 TATDN1Q6P1N9 297 aa22.42■■□□□ 1.18
HDAC6-231ENST00000488905 GPRC5AQ8NFJ5 357 aa22.42■■□□□ 1.18
HDAC6-231ENST00000488905 GTF3C2Q8WUA4 911 aaPredicted RBP22.42■■□□□ 1.18
HDAC6-231ENST00000488905 SOCS4Q8WXH5 440 aa22.42■■□□□ 1.18
HDAC6-231ENST00000488905 TRIB2Q92519 343 aa22.42■■□□□ 1.18
HDAC6-231ENST00000488905 EMILIN3Q9NT22 766 aa22.42■■□□□ 1.18
HDAC6-231ENST00000488905 RPTORQ8N122 1335 aa22.41■■□□□ 1.18
HDAC6-231ENST00000488905 HSP90AB4PQ58FF6 505 aa22.41■■□□□ 1.18
HDAC6-231ENST00000488905 USP17L2Q6R6M4 530 aa22.41■■□□□ 1.18
HDAC6-231ENST00000488905 PAWRQ96IZ0 340 aaKnown RBP22.41■■□□□ 1.18
HDAC6-231ENST00000488905 PRO3102Q9H379 93 aa22.41■■□□□ 1.18
HDAC6-231ENST00000488905 HMX1Q9NP08 348 aaPredicted RBP22.41■■□□□ 1.18
HDAC6-231ENST00000488905 IL1RAPL2Q9NP60 686 aa22.41■■□□□ 1.18
HDAC6-231ENST00000488905 DNAH12Q6ZR08 3092 aa22.41■■□□□ 1.18
HDAC6-231ENST00000488905 EVI5O60447 810 aa22.4■■□□□ 1.18
HDAC6-231ENST00000488905 CYP2B6P20813 491 aa22.4■■□□□ 1.18
HDAC6-231ENST00000488905 MAPK4P31152 587 aa22.4■■□□□ 1.18
HDAC6-231ENST00000488905 ERVK-9P63128 1117 aa22.4■■□□□ 1.18
HDAC6-231ENST00000488905 ERVK-24P63145 666 aa22.4■■□□□ 1.18
HDAC6-231ENST00000488905 ANKLE1Q8NAG6 615 aa22.4■■□□□ 1.18
HDAC6-231ENST00000488905 DIS3LQ8TF46 1054 aaKnown RBP22.4■■□□□ 1.18
HDAC6-231ENST00000488905 C12orf42Q96LP6 360 aa22.4■■□□□ 1.18
HDAC6-231ENST00000488905 FEZ1Q99689 392 aa22.4■■□□□ 1.18
HDAC6-231ENST00000488905 NUDT12Q9BQG2 462 aa22.4■■□□□ 1.18
HDAC6-231ENST00000488905 RIOK1Q9BRS2 568 aaKnown RBP22.4■■□□□ 1.18
HDAC6-231ENST00000488905 RBPJLQ9UBG7 517 aa22.4■■□□□ 1.18
HDAC6-231ENST00000488905 BAZ2AQ9UIF9 1905 aaKnown RBP22.39■■□□□ 1.18
HDAC6-231ENST00000488905 PDE3AQ14432 1141 aa22.39■■□□□ 1.17
HDAC6-231ENST00000488905 ZYXQ15942 572 aaKnown RBP22.39■■□□□ 1.17
HDAC6-231ENST00000488905 DIEXFQ68CQ4 756 aaKnown RBP22.39■■□□□ 1.17
HDAC6-231ENST00000488905 NECAB2Q7Z6G3 386 aa22.39■■□□□ 1.17
HDAC6-231ENST00000488905 TTC6Q86TZ1 520 aa22.39■■□□□ 1.17
HDAC6-231ENST00000488905 RHPN1Q8TCX5 695 aa22.39■■□□□ 1.17
HDAC6-231ENST00000488905 PAGR1Q9BTK6 254 aa22.39■■□□□ 1.17
HDAC6-231ENST00000488905 XRCC5P13010 732 aaKnown RBP22.38■■□□□ 1.17
HDAC6-231ENST00000488905 RAB3GAP1Q15042 981 aa22.38■■□□□ 1.17
HDAC6-231ENST00000488905 TTF1Q15361 905 aaPredicted RBP22.38■■□□□ 1.17
HDAC6-231ENST00000488905 MAP3K21Q5TCX8 1036 aa22.38■■□□□ 1.17
HDAC6-231ENST00000488905 PORCNQ9H237 461 aa22.38■■□□□ 1.17
HDAC6-231ENST00000488905 PRKAR2AP13861 404 aaKnown RBP22.37■■□□□ 1.17
HDAC6-231ENST00000488905 ABCB5Q2M3G0 1257 aa22.37■■□□□ 1.17
HDAC6-231ENST00000488905 Q3C1V9 767 aa22.37■■□□□ 1.17
HDAC6-231ENST00000488905 CERKLQ49MI3 558 aaPredicted RBP22.37■■□□□ 1.17
HDAC6-231ENST00000488905 POTEEQ6S8J3 1075 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms