RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 TMOD4Q9NZQ9 345 aa31.69■■■□□ 2.66
RNF220-216ENST00000488865 C19orf81C9J6K1 198 aa31.68■■■□□ 2.66
RNF220-216ENST00000488865 INHAP05111 366 aa31.68■■■□□ 2.66
RNF220-216ENST00000488865 JAG1P78504 1218 aa31.68■■■□□ 2.66
RNF220-216ENST00000488865 AACSQ86V21 672 aa31.68■■■□□ 2.66
RNF220-216ENST00000488865 MAGEB6Q8N7X4 407 aa31.68■■■□□ 2.66
RNF220-216ENST00000488865 SAP30BPQ9UHR5 308 aaKnown RBP31.68■■■□□ 2.66
RNF220-216ENST00000488865 DOCK3Q8IZD9 2030 aa31.68■■■□□ 2.66
RNF220-216ENST00000488865 HOXA7P31268 230 aaPredicted RBP31.67■■■□□ 2.66
RNF220-216ENST00000488865 MAP3K12Q12852 859 aa31.67■■■□□ 2.66
RNF220-216ENST00000488865 SGPL1O95470 568 aa31.66■■■□□ 2.66
RNF220-216ENST00000488865 MORF4L1Q9UBU8 362 aa31.66■■■□□ 2.66
RNF220-216ENST00000488865 ZBTB21Q9ULJ3 1066 aa31.66■■■□□ 2.66
RNF220-216ENST00000488865 USP17L10C9JJH3 530 aa31.65■■■□□ 2.66
RNF220-216ENST00000488865 H0YGN5 161 aa31.65■■■□□ 2.66
RNF220-216ENST00000488865 IRX3P78415 501 aaPredicted RBP31.65■■■□□ 2.66
RNF220-216ENST00000488865 MIGA1Q8NAN2 632 aa31.65■■■□□ 2.66
RNF220-216ENST00000488865 ANTXR1Q9H6X2 564 aa31.65■■■□□ 2.66
RNF220-216ENST00000488865 NDUFB9Q9Y6M9 179 aa31.65■■■□□ 2.66
RNF220-216ENST00000488865 GDF11O95390 407 aa31.64■■■□□ 2.66
RNF220-216ENST00000488865 USP5P45974 858 aa31.64■■■□□ 2.66
RNF220-216ENST00000488865 HTATIP2Q9BUP3 242 aa31.64■■■□□ 2.66
RNF220-216ENST00000488865 SHROOM1Q2M3G4 852 aaPredicted RBP31.63■■■□□ 2.65
RNF220-216ENST00000488865 RHPN1Q8TCX5 695 aa31.63■■■□□ 2.65
RNF220-216ENST00000488865 DPF3Q92784 378 aa31.63■■■□□ 2.65
RNF220-216ENST00000488865 TAOK2Q9UL54 1235 aa31.63■■■□□ 2.65
RNF220-216ENST00000488865 COLQQ9Y215 455 aaPredicted RBP31.63■■■□□ 2.65
RNF220-216ENST00000488865 MYH1P12882 1939 aa31.63■■■□□ 2.65
RNF220-216ENST00000488865 CEP290O15078 2479 aa31.62■■■□□ 2.65
RNF220-216ENST00000488865 EHD4Q9H223 541 aa31.62■■■□□ 2.65
RNF220-216ENST00000488865 PAK6Q9NQU5 681 aaPredicted RBP31.62■■■□□ 2.65
RNF220-216ENST00000488865 GJD2Q9UKL4 321 aa31.62■■■□□ 2.65
RNF220-216ENST00000488865 FARP2O94887 1054 aaPredicted RBP31.61■■■□□ 2.65
RNF220-216ENST00000488865 TTF1Q15361 905 aaPredicted RBP31.61■■■□□ 2.65
RNF220-216ENST00000488865 TATDN1Q6P1N9 297 aa31.61■■■□□ 2.65
RNF220-216ENST00000488865 RPAP2Q8IXW5 612 aaPredicted RBP31.61■■■□□ 2.65
RNF220-216ENST00000488865 P2RX7Q99572 595 aaKnown RBP31.61■■■□□ 2.65
RNF220-216ENST00000488865 IL1RAPL2Q9NP60 686 aa31.61■■■□□ 2.65
RNF220-216ENST00000488865 SERPINB13Q9UIV8 391 aa31.61■■■□□ 2.65
RNF220-216ENST00000488865 DEFB118Q96PH6 123 aa31.6■■■□□ 2.65
RNF220-216ENST00000488865 HERVK_113P62684 666 aa31.59■■■□□ 2.65
RNF220-216ENST00000488865 TTC6Q86TZ1 520 aa31.59■■■□□ 2.65
RNF220-216ENST00000488865 KIF1BPQ96EK5 621 aa31.59■■■□□ 2.65
RNF220-216ENST00000488865 HMMRO75330 724 aa31.58■■■□□ 2.65
RNF220-216ENST00000488865 GH2P01242 217 aa31.58■■■□□ 2.65
RNF220-216ENST00000488865 TFRCP02786 760 aaKnown RBP31.58■■■□□ 2.65
RNF220-216ENST00000488865 HMGCRP04035 888 aa31.58■■■□□ 2.65
RNF220-216ENST00000488865 USP17L2Q6R6M4 530 aa31.58■■■□□ 2.65
RNF220-216ENST00000488865 CLASRPQ8N2M8 674 aaKnown RBP31.58■■■□□ 2.65
RNF220-216ENST00000488865 GPRC5AQ8NFJ5 357 aa31.58■■■□□ 2.65
RNF220-216ENST00000488865 PPIL4Q8WUA2 492 aaKnown RBP eCLIP31.58■■■□□ 2.65
RNF220-216ENST00000488865 RIOK1Q9BRS2 568 aaKnown RBP31.58■■■□□ 2.65
RNF220-216ENST00000488865 CRISPLD2Q9H0B8 497 aa31.58■■■□□ 2.65
RNF220-216ENST00000488865 DDX19BQ9UMR2 479 aa31.58■■■□□ 2.65
RNF220-216ENST00000488865 GTF3C2Q8WUA4 911 aaPredicted RBP31.57■■■□□ 2.64
RNF220-216ENST00000488865 EMILIN3Q9NT22 766 aa31.57■■■□□ 2.64
RNF220-216ENST00000488865 FXR1P51114 621 aaKnown RBP eCLIP31.56■■■□□ 2.64
RNF220-216ENST00000488865 TXNRD2Q9NNW7 524 aa31.56■■■□□ 2.64
RNF220-216ENST00000488865 ZBTB40Q9NUA8 1239 aa31.56■■■□□ 2.64
RNF220-216ENST00000488865 C12orf42Q96LP6 360 aa31.55■■■□□ 2.64
RNF220-216ENST00000488865 XRN2Q9H0D6 950 aaKnown RBP eCLIP31.55■■■□□ 2.641e-9■□□□□ 9.8
RNF220-216ENST00000488865 RBPJLQ9UBG7 517 aa31.55■■■□□ 2.64
RNF220-216ENST00000488865 NR2E3Q9Y5X4 410 aa31.55■■■□□ 2.64
RNF220-216ENST00000488865 MAGEB6P1A0A0J9YX57 407 aa31.54■■■□□ 2.64
RNF220-216ENST00000488865 PLXNB2O15031 1838 aa31.54■■■□□ 2.64
RNF220-216ENST00000488865 PDE6AP16499 860 aa31.53■■■□□ 2.64
RNF220-216ENST00000488865 CERKLQ49MI3 558 aaPredicted RBP31.53■■■□□ 2.64
RNF220-216ENST00000488865 SLC9C2Q5TAH2 1124 aa31.53■■■□□ 2.64
RNF220-216ENST00000488865 SIRT2Q8IXJ6 389 aa31.53■■■□□ 2.64
RNF220-216ENST00000488865 SOCS4Q8WXH5 440 aa31.53■■■□□ 2.64
RNF220-216ENST00000488865 CHMP4BQ9H444 224 aaKnown RBP31.53■■■□□ 2.64
RNF220-216ENST00000488865 COG6Q9Y2V7 657 aa31.53■■■□□ 2.64
RNF220-216ENST00000488865 RPTORQ8N122 1335 aa31.52■■■□□ 2.64
RNF220-216ENST00000488865 RAB11FIP3O75154 756 aa31.52■■■□□ 2.64
RNF220-216ENST00000488865 IFIT2P09913 472 aaKnown RBP31.52■■■□□ 2.64
RNF220-216ENST00000488865 MAPK4P31152 587 aa31.52■■■□□ 2.64
RNF220-216ENST00000488865 ERVK-9P63128 1117 aa31.52■■■□□ 2.64
RNF220-216ENST00000488865 ERVK-24P63145 666 aa31.52■■■□□ 2.64
RNF220-216ENST00000488865 ABCB5Q2M3G0 1257 aa31.52■■■□□ 2.64
RNF220-216ENST00000488865 FEZ1Q99689 392 aa31.52■■■□□ 2.64
RNF220-216ENST00000488865 NUDT12Q9BQG2 462 aa31.52■■■□□ 2.64
RNF220-216ENST00000488865 CRNKL1Q9BZJ0 848 aaKnown RBP31.52■■■□□ 2.64
RNF220-216ENST00000488865 XRCC5P13010 732 aaKnown RBP31.51■■■□□ 2.63
RNF220-216ENST00000488865 PLCD1P51178 756 aa31.51■■■□□ 2.63
RNF220-216ENST00000488865 USP14P54578 494 aa31.51■■■□□ 2.63
RNF220-216ENST00000488865 KIAA1683Q9H0B3 1180 aa31.51■■■□□ 2.63
RNF220-216ENST00000488865 HMX1Q9NP08 348 aaPredicted RBP31.51■■■□□ 2.63
RNF220-216ENST00000488865 CABP5Q9NP86 173 aa31.51■■■□□ 2.63
RNF220-216ENST00000488865 DDX60LQ5H9U9 1706 aaKnown RBP31.5■■■□□ 2.63
RNF220-216ENST00000488865 APBB1O00213 710 aa31.5■■■□□ 2.63
RNF220-216ENST00000488865 PEX10O60683 326 aa31.5■■■□□ 2.63
RNF220-216ENST00000488865 POLR3DP05423 398 aaPredicted RBP31.5■■■□□ 2.63
RNF220-216ENST00000488865 RAB3GAP1Q15042 981 aa31.5■■■□□ 2.63
RNF220-216ENST00000488865 CHRDL2Q6WN34 429 aa31.5■■■□□ 2.63
RNF220-216ENST00000488865 USP17L15C9J2P7 530 aa31.49■■■□□ 2.63
RNF220-216ENST00000488865 USP17L13C9JLJ4 530 aa31.49■■■□□ 2.63
RNF220-216ENST00000488865 USP17L11C9JVI0 530 aa31.49■■■□□ 2.63
RNF220-216ENST00000488865 USP17L18D6R9N7 530 aa31.49■■■□□ 2.63
RNF220-216ENST00000488865 USP17L22D6RA61 530 aa31.49■■■□□ 2.63
RNF220-216ENST00000488865 USP17L17D6RBQ6 530 aa31.49■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms