RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 ATP1A1P05023 1023 aaKnown RBP18.28■□□□□ 0.52
MCF2L-229ENST00000488765 CDR1P51861 262 aa18.28■□□□□ 0.52
MCF2L-229ENST00000488765 DHX32Q7L7V1 743 aaKnown RBP18.28■□□□□ 0.52
MCF2L-229ENST00000488765 GRIN2DO15399 1336 aa18.28■□□□□ 0.52
MCF2L-229ENST00000488765 CPLX1O14810 134 aa18.27■□□□□ 0.52
MCF2L-229ENST00000488765 OPLAHO14841 1288 aa18.27■□□□□ 0.52
MCF2L-229ENST00000488765 GBP2P32456 591 aaPredicted RBP18.27■□□□□ 0.52
MCF2L-229ENST00000488765 GRIN1Q05586 938 aa18.27■□□□□ 0.52
MCF2L-229ENST00000488765 RAPGEF4Q8WZA2 1011 aa18.27■□□□□ 0.52
MCF2L-229ENST00000488765 MED15Q96RN5 788 aa18.27■□□□□ 0.52
MCF2L-229ENST00000488765 ANKRD26Q9UPS8 1709 aa18.27■□□□□ 0.52
MCF2L-229ENST00000488765 STAMQ92783 540 aa18.27■□□□□ 0.52
MCF2L-229ENST00000488765 DIP2AQ14689 1571 aa18.27■□□□□ 0.51
MCF2L-229ENST00000488765 PPFIA1Q13136 1202 aa18.27■□□□□ 0.51
MCF2L-229ENST00000488765 CCDC40Q4G0X9 1142 aa18.27■□□□□ 0.51
MCF2L-229ENST00000488765 BEND3Q5T5X7 828 aa18.27■□□□□ 0.51
MCF2L-229ENST00000488765 CCDC114Q96M63 670 aa18.27■□□□□ 0.51
MCF2L-229ENST00000488765 CHP1Q99653 195 aa18.27■□□□□ 0.51
MCF2L-229ENST00000488765 ZC3H4Q9UPT8 1303 aaKnown RBP18.26■□□□□ 0.51
MCF2L-229ENST00000488765 ADGRL3Q9HAR2 1447 aa18.26■□□□□ 0.51
MCF2L-229ENST00000488765 CMA1P23946 247 aa18.26■□□□□ 0.51
MCF2L-229ENST00000488765 INHBEP58166 350 aa18.26■□□□□ 0.51
MCF2L-229ENST00000488765 KRT32Q14532 448 aa18.26■□□□□ 0.51
MCF2L-229ENST00000488765 TEX11Q8IYF3 940 aa18.26■□□□□ 0.51
MCF2L-229ENST00000488765 KCNH5Q8NCM2 988 aa18.26■□□□□ 0.51
MCF2L-229ENST00000488765 EEF2KMTQ96G04 330 aa18.26■□□□□ 0.51
MCF2L-229ENST00000488765 SEC31BQ9NQW1 1179 aa18.26■□□□□ 0.51
MCF2L-229ENST00000488765 HMG20BQ9P0W2 317 aa18.26■□□□□ 0.51
MCF2L-229ENST00000488765 MEFVO15553 781 aaPredicted RBP18.26■□□□□ 0.51
MCF2L-229ENST00000488765 ALDH1L1O75891 902 aa18.26■□□□□ 0.51
MCF2L-229ENST00000488765 GCFC2P16383 781 aaKnown RBP18.26■□□□□ 0.51
MCF2L-229ENST00000488765 USP14P54578 494 aa18.26■□□□□ 0.51
MCF2L-229ENST00000488765 TBC1D8BQ0IIM8 1120 aa18.26■□□□□ 0.51
MCF2L-229ENST00000488765 ZBTB10Q96DT7 871 aa18.26■□□□□ 0.51
MCF2L-229ENST00000488765 PPANQ9NQ55 473 aaKnown RBP18.26■□□□□ 0.51
MCF2L-229ENST00000488765 DNA2P51530 1060 aa18.25■□□□□ 0.51
MCF2L-229ENST00000488765 CCDC102BQ68D86 513 aa18.25■□□□□ 0.51
MCF2L-229ENST00000488765 THOC1Q96FV9 657 aaKnown RBP18.25■□□□□ 0.51
MCF2L-229ENST00000488765 AFMP43652 599 aa18.25■□□□□ 0.51
MCF2L-229ENST00000488765 EIF4A1P60842 406 aaKnown RBP18.25■□□□□ 0.51
MCF2L-229ENST00000488765 SPRED3Q2MJR0 410 aa18.25■□□□□ 0.51
MCF2L-229ENST00000488765 AIDAQ96BJ3 306 aa18.25■□□□□ 0.51
MCF2L-229ENST00000488765 NUP88Q99567 741 aaPredicted RBP18.25■□□□□ 0.51
MCF2L-229ENST00000488765 VPS16Q9H269 839 aa18.25■□□□□ 0.51
MCF2L-229ENST00000488765 JADE2Q9NQC1 790 aa18.25■□□□□ 0.51
MCF2L-229ENST00000488765 ITSN1Q15811 1721 aa18.25■□□□□ 0.51
MCF2L-229ENST00000488765 KAT6BQ8WYB5 2073 aa18.25■□□□□ 0.51
MCF2L-229ENST00000488765 PEAK1Q9H792 1746 aa18.25■□□□□ 0.51
MCF2L-229ENST00000488765 HIP1O00291 1037 aa18.25■□□□□ 0.51
MCF2L-229ENST00000488765 ACCSLQ4AC99 568 aa18.25■□□□□ 0.51
MCF2L-229ENST00000488765 CCDC13Q8IYE1 715 aa18.25■□□□□ 0.51
MCF2L-229ENST00000488765 CCDC82Q8N4S0 544 aa18.25■□□□□ 0.51
MCF2L-229ENST00000488765 MAP3K2Q9Y2U5 619 aa18.25■□□□□ 0.51
MCF2L-229ENST00000488765 POLR2DO15514 142 aaKnown RBP18.24■□□□□ 0.51
MCF2L-229ENST00000488765 HPDP32754 393 aaPredicted RBP18.24■□□□□ 0.51
MCF2L-229ENST00000488765 SLC40A1Q9NP59 571 aa18.24■□□□□ 0.51
MCF2L-229ENST00000488765 HAUS2Q9NVX0 235 aa18.24■□□□□ 0.51
MCF2L-229ENST00000488765 KCNH3Q9ULD8 1083 aa18.24■□□□□ 0.51
MCF2L-229ENST00000488765 ZPR1O75312 459 aa18.24■□□□□ 0.51
MCF2L-229ENST00000488765 ERVK-24P63145 666 aa18.24■□□□□ 0.51
MCF2L-229ENST00000488765 PHKBQ93100 1093 aa18.24■□□□□ 0.51
MCF2L-229ENST00000488765 TUBE1Q9UJT0 475 aa18.24■□□□□ 0.51
MCF2L-229ENST00000488765 MAN1B1Q9UKM7 699 aa18.24■□□□□ 0.51
MCF2L-229ENST00000488765 C3P01024 1663 aa18.23■□□□□ 0.51
MCF2L-229ENST00000488765 CXCR5P32302 372 aa18.23■□□□□ 0.51
MCF2L-229ENST00000488765 AARSP49588 968 aaKnown RBP eCLIP18.23■□□□□ 0.51
MCF2L-229ENST00000488765 HDLBPQ00341 1268 aaKnown RBP18.23■□□□□ 0.51
MCF2L-229ENST00000488765 PARD3BQ8TEW8 1205 aa18.23■□□□□ 0.51
MCF2L-229ENST00000488765 SPDL1Q96EA4 605 aa18.23■□□□□ 0.51
MCF2L-229ENST00000488765 RUFY1Q96T51 708 aa18.23■□□□□ 0.51
MCF2L-229ENST00000488765 STRN4Q9NRL3 753 aa18.23■□□□□ 0.51
MCF2L-229ENST00000488765 EHD2Q9NZN4 543 aa18.23■□□□□ 0.51
MCF2L-229ENST00000488765 DUSP10Q9Y6W6 482 aa18.23■□□□□ 0.51
MCF2L-229ENST00000488765 PDE2AO00408 941 aaPredicted RBP18.23■□□□□ 0.51
MCF2L-229ENST00000488765 WHAMMP3Q1A5X7 153 aa18.23■□□□□ 0.51
MCF2L-229ENST00000488765 ARHGEF25Q86VW2 580 aa18.23■□□□□ 0.51
MCF2L-229ENST00000488765 GOLGA8BA8MQT2 603 aa18.23■□□□□ 0.51
MCF2L-229ENST00000488765 DMGDHQ9UI17 866 aaKnown RBP18.23■□□□□ 0.51
MCF2L-229ENST00000488765 KLF18A0A0U1RQI7 1052 aa18.22■□□□□ 0.51
MCF2L-229ENST00000488765 SHOX2O60902 331 aaPredicted RBP18.22■□□□□ 0.51
MCF2L-229ENST00000488765 PREPLQ4J6C6 727 aaPredicted RBP18.22■□□□□ 0.51
MCF2L-229ENST00000488765 TTMPQ5BVD1 217 aa18.22■□□□□ 0.51
MCF2L-229ENST00000488765 TSEN2Q8NCE0 465 aaKnown RBP18.22■□□□□ 0.51
MCF2L-229ENST00000488765 SERTAD1Q9UHV2 236 aa18.22■□□□□ 0.51
MCF2L-229ENST00000488765 MAPK8IP1Q9UQF2 711 aa18.22■□□□□ 0.51
MCF2L-229ENST00000488765 MACROD2A1Z1Q3 448 aa18.22■□□□□ 0.51
MCF2L-229ENST00000488765 E7EWF7 191 aa18.22■□□□□ 0.51
MCF2L-229ENST00000488765 NR1I3Q14994 352 aa18.22■□□□□ 0.51
MCF2L-229ENST00000488765 USP49Q70CQ1 688 aa18.22■□□□□ 0.51
MCF2L-229ENST00000488765 SUCLG2Q96I99 432 aa18.22■□□□□ 0.51
MCF2L-229ENST00000488765 LLPHQ9BRT6 129 aaKnown RBP18.22■□□□□ 0.51
MCF2L-229ENST00000488765 TUBGCP6Q96RT7 1819 aa18.22■□□□□ 0.51
MCF2L-229ENST00000488765 WDR93Q6P2C0 686 aa18.21■□□□□ 0.51
MCF2L-229ENST00000488765 RNPC3Q96LT9 517 aaKnown RBP18.21■□□□□ 0.51
MCF2L-229ENST00000488765 POLR3EQ9NVU0 708 aa18.21■□□□□ 0.51
MCF2L-229ENST00000488765 RNMTO43148 476 aaKnown RBP18.21■□□□□ 0.51
MCF2L-229ENST00000488765 RIC3Q7Z5B4 369 aa18.21■□□□□ 0.51
MCF2L-229ENST00000488765 IRAK4Q9NWZ3 460 aa18.21■□□□□ 0.51
MCF2L-229ENST00000488765 E7EVH7 732 aa18.21■□□□□ 0.51
MCF2L-229ENST00000488765 PTCD1O75127 700 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms