RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 GNL2Q13823 731 aaKnown RBP7.07□□□□□ -1.28
ITGB1-214ENST00000488427 COL9A2Q14055 689 aaPredicted RBP7.07□□□□□ -1.28
ITGB1-214ENST00000488427 LDLRAD1Q5T700 205 aa7.07□□□□□ -1.28
ITGB1-214ENST00000488427 FBXL19Q6PCT2 694 aa7.07□□□□□ -1.28
ITGB1-214ENST00000488427 SEZ6L2Q6UXD5 910 aa7.07□□□□□ -1.28
ITGB1-214ENST00000488427 ARMCX6Q7L4S7 300 aa7.07□□□□□ -1.28
ITGB1-214ENST00000488427 MRPL41Q8IXM3 137 aaKnown RBP7.07□□□□□ -1.28
ITGB1-214ENST00000488427 CCSER2Q9H7U1 834 aa7.07□□□□□ -1.28
ITGB1-214ENST00000488427 PRDM10Q9NQV6 1147 aa7.07□□□□□ -1.28
ITGB1-214ENST00000488427 C1GALT1Q9NS00 363 aa7.07□□□□□ -1.28
ITGB1-214ENST00000488427 RNF114Q9Y508 228 aa7.07□□□□□ -1.28
ITGB1-214ENST00000488427 CYP26A1O43174 497 aa7.06□□□□□ -1.28
ITGB1-214ENST00000488427 F13BP05160 661 aa7.06□□□□□ -1.28
ITGB1-214ENST00000488427 FAM87AP0C7U9 286 aa7.06□□□□□ -1.28
ITGB1-214ENST00000488427 LRRFIP1Q32MZ4 808 aaKnown RBP7.06□□□□□ -1.28
ITGB1-214ENST00000488427 NT5DC4Q86YG4 428 aa7.06□□□□□ -1.28
ITGB1-214ENST00000488427 REXO1Q8N1G1 1221 aaKnown RBP7.06□□□□□ -1.28
ITGB1-214ENST00000488427 NKD1Q969G9 470 aa7.06□□□□□ -1.28
ITGB1-214ENST00000488427 TGIF2Q9GZN2 237 aa7.06□□□□□ -1.28
ITGB1-214ENST00000488427 LGR6Q9HBX8 967 aa7.06□□□□□ -1.28
ITGB1-214ENST00000488427 DDX41Q9UJV9 622 aaKnown RBP7.06□□□□□ -1.28
ITGB1-214ENST00000488427 PRR36Q9H6K5 1346 aa7.05□□□□□ -1.28
ITGB1-214ENST00000488427 CST3P01034 146 aaPredicted RBP7.05□□□□□ -1.28
ITGB1-214ENST00000488427 FOSL1P15407 271 aa7.05□□□□□ -1.28
ITGB1-214ENST00000488427 SPINK2P20155 84 aa7.05□□□□□ -1.28
ITGB1-214ENST00000488427 NTF4P34130 210 aa7.05□□□□□ -1.28
ITGB1-214ENST00000488427 ETV3P41162 512 aa7.05□□□□□ -1.28
ITGB1-214ENST00000488427 CDK5R2Q13319 367 aa7.05□□□□□ -1.28
ITGB1-214ENST00000488427 TMEM201Q5SNT2 666 aa7.05□□□□□ -1.28
ITGB1-214ENST00000488427 TMEM87BQ96K49 555 aa7.05□□□□□ -1.28
ITGB1-214ENST00000488427 DUSP23Q9BVJ7 150 aa7.05□□□□□ -1.28
ITGB1-214ENST00000488427 MKNK2Q9HBH9 465 aa7.05□□□□□ -1.28
ITGB1-214ENST00000488427 ADAMTS1Q9UHI8 967 aa7.05□□□□□ -1.28
ITGB1-214ENST00000488427 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.05□□□□□ -1.28
ITGB1-214ENST00000488427 GNAT3A8MTJ3 354 aa7.04□□□□□ -1.28
ITGB1-214ENST00000488427 HTR3BO95264 441 aa7.04□□□□□ -1.28
ITGB1-214ENST00000488427 GARTP22102 1010 aa7.04□□□□□ -1.28
ITGB1-214ENST00000488427 MCM4P33991 863 aa7.04□□□□□ -1.28
ITGB1-214ENST00000488427 HDLBPQ00341 1268 aaKnown RBP7.04□□□□□ -1.28
ITGB1-214ENST00000488427 MCATQ8IVS2 390 aaKnown RBP7.04□□□□□ -1.28
ITGB1-214ENST00000488427 TOP6BLQ8N6T0 577 aa7.04□□□□□ -1.28
ITGB1-214ENST00000488427 PRDM5Q9NQX1 630 aaPredicted RBP7.04□□□□□ -1.28
ITGB1-214ENST00000488427 IGF2BP3O00425 579 aaKnown RBP eCLIP7.03□□□□□ -1.28
ITGB1-214ENST00000488427 TLR3O15455 904 aaKnown RBP7.03□□□□□ -1.28
ITGB1-214ENST00000488427 DYNC1LI2O43237 492 aaPredicted RBP7.03□□□□□ -1.28
ITGB1-214ENST00000488427 WNT11O96014 354 aa7.03□□□□□ -1.28
ITGB1-214ENST00000488427 ERCC5P28715 1186 aaPredicted RBP7.03□□□□□ -1.28
ITGB1-214ENST00000488427 ADMP35318 185 aa7.03□□□□□ -1.28
ITGB1-214ENST00000488427 SEZ6Q53EL9 994 aa7.03□□□□□ -1.28
ITGB1-214ENST00000488427 ZNF394Q53GI3 561 aa7.03□□□□□ -1.28
ITGB1-214ENST00000488427 ZNF765Q7L2R6 523 aa7.03□□□□□ -1.28
ITGB1-214ENST00000488427 VPS37DQ86XT2 251 aa7.03□□□□□ -1.28
ITGB1-214ENST00000488427 DTX1Q86Y01 620 aa7.03□□□□□ -1.28
ITGB1-214ENST00000488427 FAM13CQ8NE31 585 aa7.03□□□□□ -1.28
ITGB1-214ENST00000488427 GATA6Q92908 595 aa7.03□□□□□ -1.28
ITGB1-214ENST00000488427 TPX2Q9ULW0 747 aaKnown RBP7.03□□□□□ -1.28
ITGB1-214ENST00000488427 MAPK8IP1Q9UQF2 711 aa7.03□□□□□ -1.28
ITGB1-214ENST00000488427 PCDHGB7Q9Y5F8 929 aa7.03□□□□□ -1.28
ITGB1-214ENST00000488427 FAM170BA6NMN3 283 aa7.02□□□□□ -1.29
ITGB1-214ENST00000488427 ATE1O95260 518 aa7.02□□□□□ -1.29
ITGB1-214ENST00000488427 SLBPQ14493 270 aaKnown RBP eCLIP7.02□□□□□ -1.29
ITGB1-214ENST00000488427 PRAMEF13Q5VWM6 474 aa7.02□□□□□ -1.29
ITGB1-214ENST00000488427 LETMD1Q6P1Q0 360 aa7.02□□□□□ -1.29
ITGB1-214ENST00000488427 METTL16Q86W50 562 aaKnown RBP7.02□□□□□ -1.29
ITGB1-214ENST00000488427 SLITRK4Q8IW52 837 aa7.02□□□□□ -1.29
ITGB1-214ENST00000488427 SLFN12Q8IYM2 578 aa7.02□□□□□ -1.29
ITGB1-214ENST00000488427 STK11IPQ8N1F8 1099 aa7.02□□□□□ -1.29
ITGB1-214ENST00000488427 GPRASP2Q96D09 838 aa7.02□□□□□ -1.29
ITGB1-214ENST00000488427 MISP3Q96FF7 219 aa7.02□□□□□ -1.29
ITGB1-214ENST00000488427 MIPEPQ99797 713 aa7.02□□□□□ -1.29
ITGB1-214ENST00000488427 LRRC4CQ9HCJ2 640 aa7.02□□□□□ -1.29
ITGB1-214ENST00000488427 UBP1Q9NZI7 540 aa7.02□□□□□ -1.29
ITGB1-214ENST00000488427 REV1Q9UBZ9 1251 aa7.02□□□□□ -1.29
ITGB1-214ENST00000488427 TJP2Q9UDY2 1190 aa7.02□□□□□ -1.29
ITGB1-214ENST00000488427 PRR19A6NJB7 356 aa7.01□□□□□ -1.29
ITGB1-214ENST00000488427 ADAMTS4O75173 837 aa7.01□□□□□ -1.29
ITGB1-214ENST00000488427 TNNI2P48788 182 aa7.01□□□□□ -1.29
ITGB1-214ENST00000488427 CDK8P49336 464 aa7.01□□□□□ -1.29
ITGB1-214ENST00000488427 CYB5D2Q8WUJ1 264 aa7.01□□□□□ -1.29
ITGB1-214ENST00000488427 FERD3LQ96RJ6 166 aa7.01□□□□□ -1.29
ITGB1-214ENST00000488427 EHMT1Q9H9B1 1298 aa7.01□□□□□ -1.29
ITGB1-214ENST00000488427 FBRSQ9HAH7 460 aa7.01□□□□□ -1.29
ITGB1-214ENST00000488427 BRMS1Q9HCU9 246 aa7.01□□□□□ -1.29
ITGB1-214ENST00000488427 GMIPQ9P107 970 aa7.01□□□□□ -1.29
ITGB1-214ENST00000488427 ANGEL1Q9UNK9 670 aaKnown RBP7.01□□□□□ -1.29
ITGB1-214ENST00000488427 INPP5FQ9Y2H2 1132 aa7.01□□□□□ -1.29
ITGB1-214ENST00000488427 PCDHB14Q9Y5E9 798 aa7.01□□□□□ -1.29
ITGB1-214ENST00000488427 GRIN3BO60391 1043 aa7□□□□□ -1.29
ITGB1-214ENST00000488427 RAG1P15918 1043 aa7□□□□□ -1.29
ITGB1-214ENST00000488427 KIR3DL1P43629 444 aa7□□□□□ -1.29
ITGB1-214ENST00000488427 RAD51AP2Q09MP3 1159 aa7□□□□□ -1.29
ITGB1-214ENST00000488427 SFRP5Q5T4F7 317 aa7□□□□□ -1.29
ITGB1-214ENST00000488427 PHACTR4Q8IZ21 702 aa7□□□□□ -1.29
ITGB1-214ENST00000488427 FBXO27Q8NI29 283 aa7□□□□□ -1.29
ITGB1-214ENST00000488427 ACSF2Q96CM8 615 aaPredicted RBP7□□□□□ -1.29
ITGB1-214ENST00000488427 CRBNQ96SW2 442 aa7□□□□□ -1.29
ITGB1-214ENST00000488427 BSDC1Q9NW68 430 aaPredicted RBP7□□□□□ -1.29
ITGB1-214ENST00000488427 KLHL3Q9UH77 587 aa7□□□□□ -1.29
ITGB1-214ENST00000488427 TMEM265A0A087WTH1 108 aa6.99□□□□□ -1.29
ITGB1-214ENST00000488427 CCNFP41002 786 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms