RNA–Protein interactions for RNA: ENST00000488391.5

LCN2-206, Transcript of lipocalin 2, humanhuman

TSL 2

Gene LCN2, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-206ENST00000488391 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.41□□□□□ -0.26
LCN2-206ENST00000488391 GPRC5AQ8NFJ5 357 aa13.41□□□□□ -0.26
LCN2-206ENST00000488391 FAM161BQ96MY7 647 aa13.41□□□□□ -0.26
LCN2-206ENST00000488391 TXNRD2Q9NNW7 524 aa13.41□□□□□ -0.26
LCN2-206ENST00000488391 POTEB2H3BUK9 544 aa13.4□□□□□ -0.26
LCN2-206ENST00000488391 NPM3O75607 178 aaKnown RBP13.4□□□□□ -0.26
LCN2-206ENST00000488391 LDHCP07864 332 aa13.4□□□□□ -0.26
LCN2-206ENST00000488391 COL6A1P12109 1028 aa13.4□□□□□ -0.26
LCN2-206ENST00000488391 XRCC5P13010 732 aaKnown RBP13.4□□□□□ -0.26
LCN2-206ENST00000488391 CCND3P30281 292 aaPredicted RBP13.4□□□□□ -0.26
LCN2-206ENST00000488391 MTMR2Q13614 643 aa13.4□□□□□ -0.26
LCN2-206ENST00000488391 CCL14Q16627 93 aa13.4□□□□□ -0.26
LCN2-206ENST00000488391 Q3C1V9 767 aa13.4□□□□□ -0.26
LCN2-206ENST00000488391 LHX8Q68G74 356 aa13.4□□□□□ -0.26
LCN2-206ENST00000488391 XAGE2Q96GT9 111 aa13.4□□□□□ -0.26
LCN2-206ENST00000488391 TBC1D2Q9BYX2 928 aa13.4□□□□□ -0.26
LCN2-206ENST00000488391 AS3MTQ9HBK9 375 aa13.4□□□□□ -0.26
LCN2-206ENST00000488391 A0A1B0GUL7 405 aa13.39□□□□□ -0.27
LCN2-206ENST00000488391 ZBTB22O15209 634 aa13.39□□□□□ -0.27
LCN2-206ENST00000488391 ZKSCAN1P17029 563 aaPredicted RBP13.39□□□□□ -0.27
LCN2-206ENST00000488391 BACE1P56817 501 aa13.39□□□□□ -0.27
LCN2-206ENST00000488391 HERVK_113P62684 666 aa13.39□□□□□ -0.27
LCN2-206ENST00000488391 JAG1P78504 1218 aa13.39□□□□□ -0.27
LCN2-206ENST00000488391 TFCP2Q12800 502 aa13.39□□□□□ -0.27
LCN2-206ENST00000488391 PI16Q6UXB8 463 aa13.39□□□□□ -0.27
LCN2-206ENST00000488391 CCAR1Q8IX12 1150 aaKnown RBP13.39□□□□□ -0.27
LCN2-206ENST00000488391 TEX11Q8IYF3 940 aa13.39□□□□□ -0.27
LCN2-206ENST00000488391 NEUROD6Q96NK8 337 aa13.39□□□□□ -0.27
LCN2-206ENST00000488391 GUCD1Q96NT3 240 aa13.39□□□□□ -0.27
LCN2-206ENST00000488391 WDR18Q9BV38 432 aa13.39□□□□□ -0.27
LCN2-206ENST00000488391 RWDD1Q9H446 243 aaPredicted RBP13.39□□□□□ -0.27
LCN2-206ENST00000488391 COPRSQ9NQ92 184 aa13.39□□□□□ -0.27
LCN2-206ENST00000488391 TMOD4Q9NZQ9 345 aa13.39□□□□□ -0.27
LCN2-206ENST00000488391 RAI14Q9P0K7 980 aa13.39□□□□□ -0.27
LCN2-206ENST00000488391 HMG20BQ9P0W2 317 aa13.39□□□□□ -0.27
LCN2-206ENST00000488391 RBPJLQ9UBG7 517 aa13.39□□□□□ -0.27
LCN2-206ENST00000488391 LOC285556D6RIA3 1793 aa13.39□□□□□ -0.27
LCN2-206ENST00000488391 ATAD5Q96QE3 1844 aa13.39□□□□□ -0.27
LCN2-206ENST00000488391 PDS5AQ29RF7 1337 aaKnown RBP13.39□□□□□ -0.27
LCN2-206ENST00000488391 UNC80Q8N2C7 3258 aa13.38□□□□□ -0.27
LCN2-206ENST00000488391 GNAI3P08754 354 aa13.38□□□□□ -0.27
LCN2-206ENST00000488391 HOXA7P31268 230 aaPredicted RBP13.38□□□□□ -0.27
LCN2-206ENST00000488391 GSTO1P78417 241 aa13.38□□□□□ -0.27
LCN2-206ENST00000488391 HDAC1Q13547 482 aaPredicted RBP13.38□□□□□ -0.27
LCN2-206ENST00000488391 TRMT44Q8IYL2 757 aaKnown RBP13.38□□□□□ -0.27
LCN2-206ENST00000488391 SOCS4Q8WXH5 440 aa13.38□□□□□ -0.27
LCN2-206ENST00000488391 USP6NLQ92738 828 aa13.38□□□□□ -0.27
LCN2-206ENST00000488391 NSUN4Q96CB9 384 aaKnown RBP13.38□□□□□ -0.27
LCN2-206ENST00000488391 PAGR1Q9BTK6 254 aa13.38□□□□□ -0.27
LCN2-206ENST00000488391 SENP6Q9GZR1 1112 aaPredicted RBP13.38□□□□□ -0.27
LCN2-206ENST00000488391 PORCNQ9H237 461 aa13.38□□□□□ -0.27
LCN2-206ENST00000488391 HERC5Q9UII4 1024 aaKnown RBP13.38□□□□□ -0.27
LCN2-206ENST00000488391 PCDHB15Q9Y5E8 787 aa13.38□□□□□ -0.27
LCN2-206ENST00000488391 DNAH12Q6ZR08 3092 aa13.38□□□□□ -0.27
LCN2-206ENST00000488391 LAMA2P24043 3122 aaKnown RBP13.37□□□□□ -0.27
LCN2-206ENST00000488391 MAP4K4O95819 1239 aaPredicted RBP13.37□□□□□ -0.27
LCN2-206ENST00000488391 MAPK4P31152 587 aa13.37□□□□□ -0.27
LCN2-206ENST00000488391 SHROOM1Q2M3G4 852 aaPredicted RBP13.37□□□□□ -0.27
LCN2-206ENST00000488391 FAM109BQ6ICB4 259 aaPredicted RBP13.37□□□□□ -0.27
LCN2-206ENST00000488391 GPR142Q7Z601 462 aa13.37□□□□□ -0.27
LCN2-206ENST00000488391 SH3RF3Q8TEJ3 882 aaPredicted RBP13.37□□□□□ -0.27
LCN2-206ENST00000488391 LBHD1Q9BQE6 289 aaPredicted RBP13.37□□□□□ -0.27
LCN2-206ENST00000488391 PI4KBQ9UBF8 816 aa13.37□□□□□ -0.27
LCN2-206ENST00000488391 AKAP2Q9Y2D5 859 aa13.37□□□□□ -0.27
LCN2-206ENST00000488391 NDUFB9Q9Y6M9 179 aa13.37□□□□□ -0.27
LCN2-206ENST00000488391 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.37□□□□□ -0.27
LCN2-206ENST00000488391 C19orf81C9J6K1 198 aa13.36□□□□□ -0.27
LCN2-206ENST00000488391 USP17L10C9JJH3 530 aa13.36□□□□□ -0.27
LCN2-206ENST00000488391 ASNSP08243 561 aa13.36□□□□□ -0.27
LCN2-206ENST00000488391 RGS2P41220 211 aa13.36□□□□□ -0.27
LCN2-206ENST00000488391 ATN1P54259 1190 aaPredicted RBP13.36□□□□□ -0.27
LCN2-206ENST00000488391 ERVK-9P63128 1117 aa13.36□□□□□ -0.27
LCN2-206ENST00000488391 ERVK-24P63145 666 aa13.36□□□□□ -0.27
LCN2-206ENST00000488391 MORN1Q5T089 497 aa13.36□□□□□ -0.27
LCN2-206ENST00000488391 GORABQ5T7V8 394 aa13.36□□□□□ -0.27
LCN2-206ENST00000488391 POTEEQ6S8J3 1075 aa13.36□□□□□ -0.27
LCN2-206ENST00000488391 PLEKHH3Q7Z736 793 aa13.36□□□□□ -0.27
LCN2-206ENST00000488391 SPATA5Q8NB90 893 aa13.36□□□□□ -0.27
LCN2-206ENST00000488391 GDF11O95390 407 aa13.35□□□□□ -0.27
LCN2-206ENST00000488391 RPAP2Q8IXW5 612 aaPredicted RBP13.35□□□□□ -0.27
LCN2-206ENST00000488391 EDC3Q96F86 508 aaKnown RBP13.35□□□□□ -0.27
LCN2-206ENST00000488391 NOL10Q9BSC4 688 aaKnown RBP13.35□□□□□ -0.27
LCN2-206ENST00000488391 CWC22Q9HCG8 908 aaKnown RBP13.35□□□□□ -0.27
LCN2-206ENST00000488391 LRP2BPQ9P2M1 347 aa13.35□□□□□ -0.27
LCN2-206ENST00000488391 HDAC5Q9UQL6 1122 aa13.35□□□□□ -0.27
LCN2-206ENST00000488391 CNGA1P29973 690 aa13.34□□□□□ -0.27
LCN2-206ENST00000488391 MAP2K5Q13163 448 aa13.34□□□□□ -0.27
LCN2-206ENST00000488391 ZNF697Q5TEC3 545 aa13.34□□□□□ -0.27
LCN2-206ENST00000488391 FOXP4Q8IVH2 680 aaPredicted RBP13.34□□□□□ -0.27
LCN2-206ENST00000488391 MAPKAPK5Q8IW41 473 aa13.34□□□□□ -0.27
LCN2-206ENST00000488391 CRACR2BQ8N4Y2 399 aaPredicted RBP13.34□□□□□ -0.27
LCN2-206ENST00000488391 TGFBRAP1Q8WUH2 860 aa13.34□□□□□ -0.27
LCN2-206ENST00000488391 MEIS3Q99687 375 aa13.34□□□□□ -0.27
LCN2-206ENST00000488391 APBA2Q99767 749 aa13.34□□□□□ -0.27
LCN2-206ENST00000488391 TRIM34Q9BYJ4 488 aa13.34□□□□□ -0.27
LCN2-206ENST00000488391 DHX36Q9H2U1 1008 aaKnown RBP13.34□□□□□ -0.27
LCN2-206ENST00000488391 DNAJC18Q9H819 358 aa13.34□□□□□ -0.27
LCN2-206ENST00000488391 EMILIN3Q9NT22 766 aa13.34□□□□□ -0.27
LCN2-206ENST00000488391 AATFQ9NY61 560 aaKnown RBP eCLIP13.34□□□□□ -0.27
LCN2-206ENST00000488391 FLRT1Q9NZU1 646 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms