RNA–Protein interactions for RNA: ENST00000488334.1

GABBR1-215, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 3

Gene GABBR1, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-215ENST00000488334 FOXP2O15409 715 aa17.2■□□□□ 0.34
GABBR1-215ENST00000488334 ABCB5Q2M3G0 1257 aa17.2■□□□□ 0.34
GABBR1-215ENST00000488334 PPP4R3BQ5MIZ7 849 aa17.2■□□□□ 0.34
GABBR1-215ENST00000488334 VPS53Q5VIR6 699 aa17.2■□□□□ 0.34
GABBR1-215ENST00000488334 SKAP1Q86WV1 359 aa17.2■□□□□ 0.34
GABBR1-215ENST00000488334 ESYT1Q9BSJ8 1104 aa17.2■□□□□ 0.34
GABBR1-215ENST00000488334 RNF41Q9H4P4 317 aaPredicted RBP17.2■□□□□ 0.34
GABBR1-215ENST00000488334 KCNH4Q9UQ05 1017 aa17.2■□□□□ 0.34
GABBR1-215ENST00000488334 CEP350Q5VT06 3117 aa17.2■□□□□ 0.34
GABBR1-215ENST00000488334 BAZ2AQ9UIF9 1905 aaKnown RBP17.19■□□□□ 0.34
GABBR1-215ENST00000488334 FAM196BA6NMK8 535 aa17.19■□□□□ 0.34
GABBR1-215ENST00000488334 ZNF213O14771 459 aa17.19■□□□□ 0.34
GABBR1-215ENST00000488334 CYP2D6P10635 497 aa17.19■□□□□ 0.34
GABBR1-215ENST00000488334 TM4SF4P48230 202 aa17.19■□□□□ 0.34
GABBR1-215ENST00000488334 SNAPC2Q13487 334 aa17.19■□□□□ 0.34
GABBR1-215ENST00000488334 IMMTQ16891 758 aaKnown RBP17.19■□□□□ 0.34
GABBR1-215ENST00000488334 OTUD7BQ6GQQ9 843 aa17.19■□□□□ 0.34
GABBR1-215ENST00000488334 TMEM179Q6ZVK1 233 aa17.19■□□□□ 0.34
GABBR1-215ENST00000488334 WDR18Q9BV38 432 aa17.19■□□□□ 0.34
GABBR1-215ENST00000488334 U3KPZ7 1027 aaPredicted RBP17.19■□□□□ 0.34
GABBR1-215ENST00000488334 SIPA1L1O43166 1804 aa17.19■□□□□ 0.34
GABBR1-215ENST00000488334 TESPA1A2RU30 521 aaPredicted RBP17.18■□□□□ 0.34
GABBR1-215ENST00000488334 EPB41L2O43491 1005 aaKnown RBP17.18■□□□□ 0.34
GABBR1-215ENST00000488334 CA12O43570 354 aa17.18■□□□□ 0.34
GABBR1-215ENST00000488334 ALDH1A1P00352 501 aa17.18■□□□□ 0.34
GABBR1-215ENST00000488334 FGRP09769 529 aa17.18■□□□□ 0.34
GABBR1-215ENST00000488334 CETPP11597 493 aa17.18■□□□□ 0.34
GABBR1-215ENST00000488334 SLC4A8Q2Y0W8 1093 aa17.18■□□□□ 0.34
GABBR1-215ENST00000488334 ZNF444Q8N0Y2 327 aaPredicted RBP17.18■□□□□ 0.34
GABBR1-215ENST00000488334 MAP4K1Q92918 833 aa17.18■□□□□ 0.34
GABBR1-215ENST00000488334 DYNLL2Q96FJ2 89 aa17.18■□□□□ 0.34
GABBR1-215ENST00000488334 OTUD5Q96G74 571 aa17.18■□□□□ 0.34
GABBR1-215ENST00000488334 ZBTB21Q9ULJ3 1066 aa17.18■□□□□ 0.34
GABBR1-215ENST00000488334 AFG3L2Q9Y4W6 797 aa17.18■□□□□ 0.34
GABBR1-215ENST00000488334 ZHX2Q9Y6X8 837 aa17.18■□□□□ 0.34
GABBR1-215ENST00000488334 OTOFQ9HC10 1997 aa17.17■□□□□ 0.34
GABBR1-215ENST00000488334 CYP2D7A0A087X1C5 515 aa17.17■□□□□ 0.34
GABBR1-215ENST00000488334 C19orf81C9J6K1 198 aa17.17■□□□□ 0.34
GABBR1-215ENST00000488334 IRF6O14896 467 aa17.17■□□□□ 0.34
GABBR1-215ENST00000488334 ORC4O43929 436 aa17.17■□□□□ 0.34
GABBR1-215ENST00000488334 KIF23Q02241 960 aaPredicted RBP17.17■□□□□ 0.34
GABBR1-215ENST00000488334 GRM1Q13255 1194 aa17.17■□□□□ 0.34
GABBR1-215ENST00000488334 FASTKD5Q7L8L6 764 aaKnown RBP17.17■□□□□ 0.34
GABBR1-215ENST00000488334 ZNF280CQ8ND82 737 aa17.17■□□□□ 0.34
GABBR1-215ENST00000488334 BEGAINQ9BUH8 593 aa17.17■□□□□ 0.34
GABBR1-215ENST00000488334 ZCCHC17Q9NP64 241 aaKnown RBP17.17■□□□□ 0.34
GABBR1-215ENST00000488334 GH2P01242 217 aa17.16■□□□□ 0.34
GABBR1-215ENST00000488334 RRP1BQ14684 758 aaKnown RBP17.16■□□□□ 0.34
GABBR1-215ENST00000488334 STAG1Q8WVM7 1258 aa17.16■□□□□ 0.34
GABBR1-215ENST00000488334 SH2D4AQ9H788 454 aa17.16■□□□□ 0.34
GABBR1-215ENST00000488334 KANSL2Q9H9L4 492 aa17.16■□□□□ 0.34
GABBR1-215ENST00000488334 DOCK1Q14185 1865 aa17.16■□□□□ 0.34
GABBR1-215ENST00000488334 MPHOSPH10O00566 681 aaKnown RBP17.15■□□□□ 0.34
GABBR1-215ENST00000488334 REC8O95072 547 aa17.15■□□□□ 0.34
GABBR1-215ENST00000488334 GDF11O95390 407 aa17.15■□□□□ 0.34
GABBR1-215ENST00000488334 SLURP2P0DP57 97 aa17.15■□□□□ 0.34
GABBR1-215ENST00000488334 USP14P54578 494 aa17.15■□□□□ 0.34
GABBR1-215ENST00000488334 AKNAD1Q5T1N1 836 aa17.15■□□□□ 0.34
GABBR1-215ENST00000488334 MFSD6Q6ZSS7 791 aa17.15■□□□□ 0.34
GABBR1-215ENST00000488334 MS4A4AQ96JQ5 239 aa17.15■□□□□ 0.34
GABBR1-215ENST00000488334 CNNM2Q9H8M5 875 aa17.15■□□□□ 0.34
GABBR1-215ENST00000488334 SYNPO2Q9UMS6 1093 aa17.15■□□□□ 0.34
GABBR1-215ENST00000488334 GTF3C3Q9Y5Q9 886 aa17.15■□□□□ 0.34
GABBR1-215ENST00000488334 THSD7BQ9C0I4 1608 aa17.14■□□□□ 0.33
GABBR1-215ENST00000488334 A0A0G2JLL6 359 aaPredicted RBP17.14■□□□□ 0.33
GABBR1-215ENST00000488334 USP17L10C9JJH3 530 aa17.14■□□□□ 0.33
GABBR1-215ENST00000488334 AOC2O75106 756 aa17.14■□□□□ 0.33
GABBR1-215ENST00000488334 RASA1P20936 1047 aa17.14■□□□□ 0.33
GABBR1-215ENST00000488334 GJA5P36382 358 aa17.14■□□□□ 0.33
GABBR1-215ENST00000488334 RAB3GAP1Q15042 981 aa17.14■□□□□ 0.33
GABBR1-215ENST00000488334 SH3D19Q5HYK7 790 aa17.14■□□□□ 0.33
GABBR1-215ENST00000488334 PRRT2Q7Z6L0 340 aaPredicted RBP17.14■□□□□ 0.33
GABBR1-215ENST00000488334 SLC44A5Q8NCS7 719 aa17.14■□□□□ 0.33
GABBR1-215ENST00000488334 IL25Q9H293 177 aa17.14■□□□□ 0.33
GABBR1-215ENST00000488334 SAGE1Q9NXZ1 904 aa17.14■□□□□ 0.33
GABBR1-215ENST00000488334 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.14■□□□□ 0.33
GABBR1-215ENST00000488334 SLC45A1Q9Y2W3 748 aa17.14■□□□□ 0.33
GABBR1-215ENST00000488334 LAMB1P07942 1786 aa17.14■□□□□ 0.33
GABBR1-215ENST00000488334 TSPY3P0CV98 308 aa17.13■□□□□ 0.33
GABBR1-215ENST00000488334 TSPY8P0CW00 308 aa17.13■□□□□ 0.33
GABBR1-215ENST00000488334 BACE1P56817 501 aa17.13■□□□□ 0.33
GABBR1-215ENST00000488334 SPP2Q13103 211 aa17.13■□□□□ 0.33
GABBR1-215ENST00000488334 CCDC178Q5BJE1 867 aa17.13■□□□□ 0.33
GABBR1-215ENST00000488334 RNF20Q5VTR2 975 aa17.13■□□□□ 0.33
GABBR1-215ENST00000488334 PROCA1Q8NCQ7 364 aaPredicted RBP17.13■□□□□ 0.33
GABBR1-215ENST00000488334 NEDD1Q8NHV4 660 aa17.13■□□□□ 0.33
GABBR1-215ENST00000488334 KRT23Q9C075 422 aa17.13■□□□□ 0.33
GABBR1-215ENST00000488334 LSG1Q9H089 658 aaKnown RBP17.13■□□□□ 0.33
GABBR1-215ENST00000488334 ARHGEF10LQ9HCE6 1279 aa17.13■□□□□ 0.33
GABBR1-215ENST00000488334 ANO2Q9NQ90 1003 aa17.13■□□□□ 0.33
GABBR1-215ENST00000488334 WBP1LQ9NX94 342 aa17.13■□□□□ 0.33
GABBR1-215ENST00000488334 PLIN4Q96Q06 1357 aa17.13■□□□□ 0.33
GABBR1-215ENST00000488334 CCL15-CCL14A0A0B4J2E2 113 aa17.12■□□□□ 0.33
GABBR1-215ENST00000488334 AKR1B1P15121 316 aa17.12■□□□□ 0.33
GABBR1-215ENST00000488334 PTH1RQ03431 593 aa17.12■□□□□ 0.33
GABBR1-215ENST00000488334 EVX2Q03828 476 aa17.12■□□□□ 0.33
GABBR1-215ENST00000488334 CTDSPL2Q05D32 466 aa17.12■□□□□ 0.33
GABBR1-215ENST00000488334 TRDNQ13061 729 aa17.12■□□□□ 0.33
GABBR1-215ENST00000488334 PABPC4Q13310 644 aaKnown RBP eCLIP17.12■□□□□ 0.33
GABBR1-215ENST00000488334 CCL15Q16663 113 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms