RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 CD209Q9NNX6 404 aa14.33□□□□□ -0.12
HLA-DOB-209ENST00000488325 CTNNA3Q9UI47 895 aa14.33□□□□□ -0.12
HLA-DOB-209ENST00000488325 PALD1Q9ULE6 856 aa14.33□□□□□ -0.12
HLA-DOB-209ENST00000488325 PCDHAC2Q9Y5I4 1007 aa14.33□□□□□ -0.12
HLA-DOB-209ENST00000488325 SNX14Q9Y5W7 946 aa14.33□□□□□ -0.12
HLA-DOB-209ENST00000488325 SALL1Q9NSC2 1324 aa14.33□□□□□ -0.12
HLA-DOB-209ENST00000488325 MYH13Q9UKX3 1938 aa14.33□□□□□ -0.12
HLA-DOB-209ENST00000488325 TCRBV5S4A2TA0A5A2 114 aa14.32□□□□□ -0.12
HLA-DOB-209ENST00000488325 SLC27A2O14975 620 aa14.32□□□□□ -0.12
HLA-DOB-209ENST00000488325 CHGBP05060 677 aa14.32□□□□□ -0.12
HLA-DOB-209ENST00000488325 HSPD1P10809 573 aaKnown RBP14.32□□□□□ -0.12
HLA-DOB-209ENST00000488325 IL1R1P14778 569 aa14.32□□□□□ -0.12
HLA-DOB-209ENST00000488325 OSBPP22059 807 aa14.32□□□□□ -0.12
HLA-DOB-209ENST00000488325 PSMA5P28066 241 aa14.32□□□□□ -0.12
HLA-DOB-209ENST00000488325 HOXD10P28358 340 aa14.32□□□□□ -0.12
HLA-DOB-209ENST00000488325 MCM2P49736 904 aa14.32□□□□□ -0.12
HLA-DOB-209ENST00000488325 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.32□□□□□ -0.12
HLA-DOB-209ENST00000488325 GUCD1Q96NT3 240 aa14.32□□□□□ -0.12
HLA-DOB-209ENST00000488325 TM6SF1Q9BZW5 370 aa14.32□□□□□ -0.12
HLA-DOB-209ENST00000488325 VEZTQ9HBM0 779 aa14.32□□□□□ -0.12
HLA-DOB-209ENST00000488325 ZMYND8Q9ULU4 1186 aaPredicted RBP14.32□□□□□ -0.12
HLA-DOB-209ENST00000488325 ALPK3Q96L96 1907 aa14.32□□□□□ -0.12
HLA-DOB-209ENST00000488325 GNAT2P19087 354 aa14.31□□□□□ -0.12
HLA-DOB-209ENST00000488325 CYP7A1P22680 504 aa14.31□□□□□ -0.12
HLA-DOB-209ENST00000488325 RASA3Q14644 834 aa14.31□□□□□ -0.12
HLA-DOB-209ENST00000488325 TSGA10IPQ3SY00 556 aa14.31□□□□□ -0.12
HLA-DOB-209ENST00000488325 SLFNL1Q499Z3 407 aa14.31□□□□□ -0.12
HLA-DOB-209ENST00000488325 NAA16Q6N069 864 aaPredicted RBP14.31□□□□□ -0.12
HLA-DOB-209ENST00000488325 C7orf61Q8IZ16 206 aa14.31□□□□□ -0.12
HLA-DOB-209ENST00000488325 MTMR14Q8NCE2 650 aa14.31□□□□□ -0.12
HLA-DOB-209ENST00000488325 TBC1D22AQ8WUA7 517 aa14.31□□□□□ -0.12
HLA-DOB-209ENST00000488325 PUS7LQ9H0K6 701 aaKnown RBP14.31□□□□□ -0.12
HLA-DOB-209ENST00000488325 ZCCHC17Q9NP64 241 aaKnown RBP14.31□□□□□ -0.12
HLA-DOB-209ENST00000488325 RAPGEFL1Q9UHV5 662 aa14.31□□□□□ -0.12
HLA-DOB-209ENST00000488325 PRUNE2Q8WUY3 3088 aa14.31□□□□□ -0.12
HLA-DOB-209ENST00000488325 MYPNQ86TC9 1320 aa14.31□□□□□ -0.12
HLA-DOB-209ENST00000488325 RPAP1Q9BWH6 1393 aaPredicted RBP14.31□□□□□ -0.12
HLA-DOB-209ENST00000488325 ECM29Q5VYK3 1845 aa14.3□□□□□ -0.12
HLA-DOB-209ENST00000488325 BTBD19C9JJ37 291 aa14.3□□□□□ -0.12
HLA-DOB-209ENST00000488325 K7ELQ4 463 aaPredicted RBP14.3□□□□□ -0.12
HLA-DOB-209ENST00000488325 MYO1BO43795 1136 aa14.3□□□□□ -0.12
HLA-DOB-209ENST00000488325 FMNL1O95466 1100 aaPredicted RBP14.3□□□□□ -0.12
HLA-DOB-209ENST00000488325 NEK4P51957 841 aa14.3□□□□□ -0.12
HLA-DOB-209ENST00000488325 GTF2IP78347 998 aa14.3□□□□□ -0.12
HLA-DOB-209ENST00000488325 GSTO1P78417 241 aa14.3□□□□□ -0.12
HLA-DOB-209ENST00000488325 VGLL4Q14135 290 aa14.3□□□□□ -0.12
HLA-DOB-209ENST00000488325 RASEFQ8IZ41 740 aa14.3□□□□□ -0.12
HLA-DOB-209ENST00000488325 TFRCP02786 760 aaKnown RBP14.29□□□□□ -0.12
HLA-DOB-209ENST00000488325 LDHBP07195 334 aaKnown RBP14.29□□□□□ -0.12
HLA-DOB-209ENST00000488325 MAGEA10P43363 369 aaPredicted RBP14.29□□□□□ -0.12
HLA-DOB-209ENST00000488325 C17orf99Q6UX52 265 aa14.29□□□□□ -0.12
HLA-DOB-209ENST00000488325 DZIP1Q86YF9 867 aaKnown RBP14.29□□□□□ -0.12
HLA-DOB-209ENST00000488325 PAWRQ96IZ0 340 aaKnown RBP14.29□□□□□ -0.12
HLA-DOB-209ENST00000488325 CPA4Q9UI42 421 aa14.29□□□□□ -0.12
HLA-DOB-209ENST00000488325 FAM205AQ6ZU69 1335 aa14.29□□□□□ -0.12
HLA-DOB-209ENST00000488325 MAST2Q6P0Q8 1798 aa14.29□□□□□ -0.12
HLA-DOB-209ENST00000488325 SPDYE2BA6NHP3 402 aa14.28□□□□□ -0.12
HLA-DOB-209ENST00000488325 MBD4O95243 580 aa14.28□□□□□ -0.12
HLA-DOB-209ENST00000488325 ZMYM6O95789 1325 aa14.28□□□□□ -0.12
HLA-DOB-209ENST00000488325 LDHCP07864 332 aa14.28□□□□□ -0.12
HLA-DOB-209ENST00000488325 SPDYE6P0CI01 402 aa14.28□□□□□ -0.12
HLA-DOB-209ENST00000488325 CETPP11597 493 aa14.28□□□□□ -0.12
HLA-DOB-209ENST00000488325 SYN1P17600 705 aa14.28□□□□□ -0.12
HLA-DOB-209ENST00000488325 PLA2G5P39877 138 aa14.28□□□□□ -0.12
HLA-DOB-209ENST00000488325 ALX1Q15699 326 aa14.28□□□□□ -0.12
HLA-DOB-209ENST00000488325 IMMTQ16891 758 aaKnown RBP14.28□□□□□ -0.12
HLA-DOB-209ENST00000488325 CFAP100Q494V2 611 aa14.28□□□□□ -0.12
HLA-DOB-209ENST00000488325 VPS53Q5VIR6 699 aa14.28□□□□□ -0.12
HLA-DOB-209ENST00000488325 SLF2Q8IX21 1173 aa14.28□□□□□ -0.12
HLA-DOB-209ENST00000488325 NSUN4Q96CB9 384 aaKnown RBP14.28□□□□□ -0.12
HLA-DOB-209ENST00000488325 PRMT6Q96LA8 375 aaPredicted RBP14.28□□□□□ -0.12
HLA-DOB-209ENST00000488325 JAKMIP1Q96N16 626 aaKnown RBP14.28□□□□□ -0.12
HLA-DOB-209ENST00000488325 STRBPQ96SI9 672 aaKnown RBP14.28□□□□□ -0.12
HLA-DOB-209ENST00000488325 NACAP1Q9BZK3 213 aa14.28□□□□□ -0.12
HLA-DOB-209ENST00000488325 MYO5AQ9Y4I1 1855 aaKnown RBP14.28□□□□□ -0.12
HLA-DOB-209ENST00000488325 CYP46A1Q9Y6A2 500 aa14.28□□□□□ -0.12
HLA-DOB-209ENST00000488325 LAMA2P24043 3122 aaKnown RBP14.28□□□□□ -0.12
HLA-DOB-209ENST00000488325 MAGEB6P1A0A0J9YX57 407 aa14.27□□□□□ -0.13
HLA-DOB-209ENST00000488325 PATL2C9JE40 543 aaKnown RBP14.27□□□□□ -0.13
HLA-DOB-209ENST00000488325 CASTP20810 708 aaKnown RBP14.27□□□□□ -0.13
HLA-DOB-209ENST00000488325 MAP3K9P80192 1104 aa14.27□□□□□ -0.13
HLA-DOB-209ENST00000488325 MECOMQ03112 1051 aa14.27□□□□□ -0.13
HLA-DOB-209ENST00000488325 PRKCZQ05513 592 aa14.27□□□□□ -0.13
HLA-DOB-209ENST00000488325 FAM109BQ6ICB4 259 aaPredicted RBP14.27□□□□□ -0.13
HLA-DOB-209ENST00000488325 BLOC1S2Q6QNY1 142 aa14.27□□□□□ -0.13
HLA-DOB-209ENST00000488325 CERS3Q8IU89 383 aa14.27□□□□□ -0.13
HLA-DOB-209ENST00000488325 CERS5Q8N5B7 392 aa14.27□□□□□ -0.13
HLA-DOB-209ENST00000488325 SLAIN1Q8ND83 568 aa14.27□□□□□ -0.13
HLA-DOB-209ENST00000488325 FAM161BQ96MY7 647 aa14.27□□□□□ -0.13
HLA-DOB-209ENST00000488325 DEFB118Q96PH6 123 aa14.27□□□□□ -0.13
HLA-DOB-209ENST00000488325 UBE2OQ9C0C9 1292 aaKnown RBP14.27□□□□□ -0.13
HLA-DOB-209ENST00000488325 ZSWIM6Q9HCJ5 1215 aa14.27□□□□□ -0.13
HLA-DOB-209ENST00000488325 RNF216Q9NWF9 866 aaPredicted RBP14.27□□□□□ -0.13
HLA-DOB-209ENST00000488325 SUGT1Q9Y2Z0 365 aa14.27□□□□□ -0.13
HLA-DOB-209ENST00000488325 CSADQ9Y600 493 aa14.27□□□□□ -0.13
HLA-DOB-209ENST00000488325 MUC3AQ02505 3323 aa14.26□□□□□ -0.13
HLA-DOB-209ENST00000488325 SPDYE5A6NIY4 337 aa14.26□□□□□ -0.13
HLA-DOB-209ENST00000488325 POTEB2H3BUK9 544 aa14.26□□□□□ -0.13
HLA-DOB-209ENST00000488325 APPP05067 770 aa14.26□□□□□ -0.13
HLA-DOB-209ENST00000488325 HMGB1P09429 215 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms