RNA–Protein interactions for RNA: ENST00000488277.1

EPB41-211, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 3

Gene EPB41, Length 262 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-211ENST00000488277 KIAA1324LA8MWY0 1029 aaPredicted RBP4.16□□□□□ -1.74
EPB41-211ENST00000488277 HTR3BO95264 441 aa4.16□□□□□ -1.74
EPB41-211ENST00000488277 CST3P01034 146 aaPredicted RBP4.16□□□□□ -1.74
EPB41-211ENST00000488277 CRKP46108 304 aa4.16□□□□□ -1.74
EPB41-211ENST00000488277 APOBRQ0VD83 1088 aa4.16□□□□□ -1.74
EPB41-211ENST00000488277 SEZ6Q53EL9 994 aa4.16□□□□□ -1.74
EPB41-211ENST00000488277 C9orf131Q5VYM1 1079 aa4.16□□□□□ -1.74
EPB41-211ENST00000488277 SLC6A19Q695T7 634 aa4.16□□□□□ -1.74
EPB41-211ENST00000488277 METTL16Q86W50 562 aaKnown RBP4.16□□□□□ -1.74
EPB41-211ENST00000488277 MCATQ8IVS2 390 aaKnown RBP4.16□□□□□ -1.74
EPB41-211ENST00000488277 MRPL41Q8IXM3 137 aaKnown RBP4.16□□□□□ -1.74
EPB41-211ENST00000488277 Q8N3U1 123 aa4.16□□□□□ -1.74
EPB41-211ENST00000488277 FAM181AQ8N9Y4 354 aa4.16□□□□□ -1.74
EPB41-211ENST00000488277 FAM13CQ8NE31 585 aa4.16□□□□□ -1.74
EPB41-211ENST00000488277 NT5C1AQ9BXI3 368 aa4.16□□□□□ -1.74
EPB41-211ENST00000488277 LRRC3Q9BY71 257 aa4.16□□□□□ -1.74
EPB41-211ENST00000488277 BRMS1Q9HCU9 246 aa4.16□□□□□ -1.74
EPB41-211ENST00000488277 ZFP64Q9NPA5 681 aa4.16□□□□□ -1.74
EPB41-211ENST00000488277 REV1Q9UBZ9 1251 aa4.16□□□□□ -1.74
EPB41-211ENST00000488277 ZC3H7BQ9UGR2 993 aaKnown RBP4.16□□□□□ -1.74
EPB41-211ENST00000488277 KLHL3Q9UH77 587 aa4.16□□□□□ -1.74
EPB41-211ENST00000488277 TPX2Q9ULW0 747 aaKnown RBP4.16□□□□□ -1.74
EPB41-211ENST00000488277 UPK3BL1B0FP48 263 aa4.15□□□□□ -1.75
EPB41-211ENST00000488277 UPK3BL2E5RIL1 263 aa4.15□□□□□ -1.75
EPB41-211ENST00000488277 SLITRK5O94991 958 aa4.15□□□□□ -1.75
EPB41-211ENST00000488277 EOMESO95936 686 aa4.15□□□□□ -1.75
EPB41-211ENST00000488277 SPINK2P20155 84 aa4.15□□□□□ -1.75
EPB41-211ENST00000488277 MCM4P33991 863 aa4.15□□□□□ -1.75
EPB41-211ENST00000488277 YARSP54577 528 aaKnown RBP4.15□□□□□ -1.75
EPB41-211ENST00000488277 RACK1P63244 317 aaKnown RBP4.15□□□□□ -1.75
EPB41-211ENST00000488277 MSMPQ1L6U9 139 aa4.15□□□□□ -1.75
EPB41-211ENST00000488277 TMEM201Q5SNT2 666 aa4.15□□□□□ -1.75
EPB41-211ENST00000488277 LETMD1Q6P1Q0 360 aa4.15□□□□□ -1.75
EPB41-211ENST00000488277 DTX1Q86Y01 620 aa4.15□□□□□ -1.75
EPB41-211ENST00000488277 NT5DC4Q86YG4 428 aa4.15□□□□□ -1.75
EPB41-211ENST00000488277 ZNF654Q8IZM8 581 aa4.15□□□□□ -1.75
EPB41-211ENST00000488277 NKD1Q969G9 470 aa4.15□□□□□ -1.75
EPB41-211ENST00000488277 EAF1Q96JC9 268 aaPredicted RBP4.15□□□□□ -1.75
EPB41-211ENST00000488277 PRDM5Q9NQX1 630 aaPredicted RBP4.15□□□□□ -1.75
EPB41-211ENST00000488277 GTF2IRD1Q9UHL9 959 aa4.15□□□□□ -1.75
EPB41-211ENST00000488277 DDX41Q9UJV9 622 aaKnown RBP4.15□□□□□ -1.75
EPB41-211ENST00000488277 PCDHB14Q9Y5E9 798 aa4.15□□□□□ -1.75
EPB41-211ENST00000488277 U3KQE9 123 aa4.15□□□□□ -1.75
EPB41-211ENST00000488277 PRR36Q9H6K5 1346 aa4.15□□□□□ -1.75
EPB41-211ENST00000488277 ITIH2P19823 946 aa4.14□□□□□ -1.75
EPB41-211ENST00000488277 MLECQ14165 292 aa4.14□□□□□ -1.75
EPB41-211ENST00000488277 GK5Q6ZS86 529 aa4.14□□□□□ -1.75
EPB41-211ENST00000488277 FAM214BQ7L5A3 538 aa4.14□□□□□ -1.75
EPB41-211ENST00000488277 PLD6Q8N2A8 252 aaKnown RBP4.14□□□□□ -1.75
EPB41-211ENST00000488277 RIN3Q8TB24 985 aa4.14□□□□□ -1.75
EPB41-211ENST00000488277 NETO1Q8TDF5 533 aa4.14□□□□□ -1.75
EPB41-211ENST00000488277 HEXIM2Q96MH2 286 aaKnown RBP4.14□□□□□ -1.75
EPB41-211ENST00000488277 GNAT3A8MTJ3 354 aa4.13□□□□□ -1.75
EPB41-211ENST00000488277 CHURC1-FNTBB4DL54 471 aa4.13□□□□□ -1.75
EPB41-211ENST00000488277 IGF2BP3O00425 579 aaKnown RBP eCLIP4.13□□□□□ -1.75
EPB41-211ENST00000488277 DNAJA2O60884 412 aa4.13□□□□□ -1.75
EPB41-211ENST00000488277 CEACAM5P06731 702 aa4.13□□□□□ -1.75
EPB41-211ENST00000488277 ZNF165P49910 485 aa4.13□□□□□ -1.75
EPB41-211ENST00000488277 OXCT1P55809 520 aa4.13□□□□□ -1.75
EPB41-211ENST00000488277 PAK2Q13177 524 aa4.13□□□□□ -1.75
EPB41-211ENST00000488277 IFI16Q16666 785 aaKnown RBP4.13□□□□□ -1.75
EPB41-211ENST00000488277 ZNF746Q6NUN9 644 aaPredicted RBP4.13□□□□□ -1.75
EPB41-211ENST00000488277 NBPF11Q86T75 865 aa4.13□□□□□ -1.75
EPB41-211ENST00000488277 CDH24Q86UP0 819 aa4.13□□□□□ -1.75
EPB41-211ENST00000488277 SLITRK4Q8IW52 837 aa4.13□□□□□ -1.75
EPB41-211ENST00000488277 CYB5D2Q8WUJ1 264 aa4.13□□□□□ -1.75
EPB41-211ENST00000488277 MKNK2Q9HBH9 465 aa4.13□□□□□ -1.75
EPB41-211ENST00000488277 BSDC1Q9NW68 430 aaPredicted RBP4.13□□□□□ -1.75
EPB41-211ENST00000488277 ANGEL1Q9UNK9 670 aaKnown RBP4.13□□□□□ -1.75
EPB41-211ENST00000488277 MAPK8IP1Q9UQF2 711 aa4.13□□□□□ -1.75
EPB41-211ENST00000488277 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.13□□□□□ -1.75
EPB41-211ENST00000488277 ATE1O95260 518 aa4.12□□□□□ -1.75
EPB41-211ENST00000488277 CBX7O95931 251 aa4.12□□□□□ -1.75
EPB41-211ENST00000488277 TCF3P15923 654 aa4.12□□□□□ -1.75
EPB41-211ENST00000488277 CYP7A1P22680 504 aa4.12□□□□□ -1.75
EPB41-211ENST00000488277 ETV3P41162 512 aa4.12□□□□□ -1.75
EPB41-211ENST00000488277 TNNI2P48788 182 aa4.12□□□□□ -1.75
EPB41-211ENST00000488277 CLCQ05315 142 aa4.12□□□□□ -1.75
EPB41-211ENST00000488277 SFRP5Q5T4F7 317 aa4.12□□□□□ -1.75
EPB41-211ENST00000488277 VSIG10LQ86VR7 867 aa4.12□□□□□ -1.75
EPB41-211ENST00000488277 SLFN12Q8IYM2 578 aa4.12□□□□□ -1.75
EPB41-211ENST00000488277 PHACTR4Q8IZ21 702 aa4.12□□□□□ -1.75
EPB41-211ENST00000488277 REXO1Q8N1G1 1221 aaKnown RBP4.12□□□□□ -1.75
EPB41-211ENST00000488277 EHMT1Q9H9B1 1298 aa4.12□□□□□ -1.75
EPB41-211ENST00000488277 GMIPQ9P107 970 aa4.12□□□□□ -1.75
EPB41-211ENST00000488277 CCDC39Q9UFE4 941 aa4.12□□□□□ -1.75
EPB41-211ENST00000488277 CNTNAP4Q9C0A0 1308 aa4.12□□□□□ -1.75
EPB41-211ENST00000488277 TMEM265A0A087WTH1 108 aa4.11□□□□□ -1.75
EPB41-211ENST00000488277 SLC22A31A6NKX4 558 aa4.11□□□□□ -1.75
EPB41-211ENST00000488277 PRR33A8MZF0 331 aa4.11□□□□□ -1.75
EPB41-211ENST00000488277 FAM155AB1AL88 458 aaPredicted RBP4.11□□□□□ -1.75
EPB41-211ENST00000488277 ADAMTS4O75173 837 aa4.11□□□□□ -1.75
EPB41-211ENST00000488277 WNT11O96014 354 aa4.11□□□□□ -1.75
EPB41-211ENST00000488277 PRNPP04156 253 aa4.11□□□□□ -1.75
EPB41-211ENST00000488277 RAG1P15918 1043 aa4.11□□□□□ -1.75
EPB41-211ENST00000488277 ERCC5P28715 1186 aaPredicted RBP4.11□□□□□ -1.75
EPB41-211ENST00000488277 ARSHQ5FYA8 562 aa4.11□□□□□ -1.75
EPB41-211ENST00000488277 OVOS1Q6IE37 1185 aa4.11□□□□□ -1.75
EPB41-211ENST00000488277 SPACA3Q8IXA5 215 aa4.11□□□□□ -1.75
EPB41-211ENST00000488277 MFSD4AQ8N468 514 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms