RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 CBX8Q9HC52 389 aa18.5■□□□□ 0.55
RAPGEF3-211ENST00000488250 ZKSCAN5Q9Y2L8 839 aa18.5■□□□□ 0.55
RAPGEF3-211ENST00000488250 FAM237AA0A1B0GTK4 181 aa18.49■□□□□ 0.55
RAPGEF3-211ENST00000488250 PRPF3O43395 683 aaKnown RBP18.49■□□□□ 0.55
RAPGEF3-211ENST00000488250 CYP2D6P10635 497 aa18.49■□□□□ 0.55
RAPGEF3-211ENST00000488250 NDUFA8P51970 172 aa18.49■□□□□ 0.55
RAPGEF3-211ENST00000488250 SP8Q8IXZ3 490 aa18.49■□□□□ 0.55
RAPGEF3-211ENST00000488250 MCM9Q9NXL9 1143 aa18.49■□□□□ 0.55
RAPGEF3-211ENST00000488250 MSNP26038 577 aaKnown RBP18.49■□□□□ 0.55
RAPGEF3-211ENST00000488250 GRIK5Q16478 980 aa18.49■□□□□ 0.55
RAPGEF3-211ENST00000488250 DIS3L2Q8IYB7 885 aaKnown RBP18.49■□□□□ 0.55
RAPGEF3-211ENST00000488250 SH3RF3Q8TEJ3 882 aaPredicted RBP18.49■□□□□ 0.55
RAPGEF3-211ENST00000488250 FAM163AQ96GL9 167 aaPredicted RBP18.49■□□□□ 0.55
RAPGEF3-211ENST00000488250 GPR101Q96P66 508 aaPredicted RBP18.49■□□□□ 0.55
RAPGEF3-211ENST00000488250 NOL10Q9BSC4 688 aaKnown RBP18.49■□□□□ 0.55
RAPGEF3-211ENST00000488250 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.49■□□□□ 0.55
RAPGEF3-211ENST00000488250 A0A1B0GVL5 298 aa18.48■□□□□ 0.55
RAPGEF3-211ENST00000488250 USP5P45974 858 aa18.48■□□□□ 0.55
RAPGEF3-211ENST00000488250 EVX2Q03828 476 aa18.48■□□□□ 0.55
RAPGEF3-211ENST00000488250 STX1AQ16623 288 aa18.48■□□□□ 0.55
RAPGEF3-211ENST00000488250 TBC1D22AQ8WUA7 517 aa18.48■□□□□ 0.55
RAPGEF3-211ENST00000488250 ANKS1AQ92625 1134 aa18.48■□□□□ 0.55
RAPGEF3-211ENST00000488250 RTFDC1Q9BY42 306 aaPredicted RBP18.48■□□□□ 0.55
RAPGEF3-211ENST00000488250 POLLQ9UGP5 575 aa18.48■□□□□ 0.55
RAPGEF3-211ENST00000488250 ANKRD31Q8N7Z5 1873 aa18.48■□□□□ 0.55
RAPGEF3-211ENST00000488250 BTBD18B2RXH4 712 aa18.47■□□□□ 0.55
RAPGEF3-211ENST00000488250 WDHD1O75717 1129 aaPredicted RBP18.47■□□□□ 0.55
RAPGEF3-211ENST00000488250 USP17L8P0C7I0 530 aa18.47■□□□□ 0.55
RAPGEF3-211ENST00000488250 ZNF165P49910 485 aa18.47■□□□□ 0.55
RAPGEF3-211ENST00000488250 ZNF827Q17R98 1081 aa18.47■□□□□ 0.55
RAPGEF3-211ENST00000488250 TMTC3Q6ZXV5 915 aa18.47■□□□□ 0.55
RAPGEF3-211ENST00000488250 FLAD1Q8NFF5 587 aa18.47■□□□□ 0.55
RAPGEF3-211ENST00000488250 FAM205AQ6ZU69 1335 aa18.47■□□□□ 0.55
RAPGEF3-211ENST00000488250 GPR75-ASB3A0A0A6YYF3 556 aa18.47■□□□□ 0.55
RAPGEF3-211ENST00000488250 AP5Z1O43299 807 aa18.47■□□□□ 0.55
RAPGEF3-211ENST00000488250 XBP1P17861 261 aa18.47■□□□□ 0.55
RAPGEF3-211ENST00000488250 AKAP17AQ02040 695 aaKnown RBP18.47■□□□□ 0.55
RAPGEF3-211ENST00000488250 DIXDC1Q155Q3 683 aa18.47■□□□□ 0.55
RAPGEF3-211ENST00000488250 PKN1Q16512 942 aa18.47■□□□□ 0.55
RAPGEF3-211ENST00000488250 RILPL1Q5EBL4 403 aa18.47■□□□□ 0.55
RAPGEF3-211ENST00000488250 CMTR1Q8N1G2 835 aaKnown RBP18.47■□□□□ 0.55
RAPGEF3-211ENST00000488250 TIGD1Q96MW7 591 aa18.47■□□□□ 0.55
RAPGEF3-211ENST00000488250 HPSEQ9Y251 543 aa18.47■□□□□ 0.55
RAPGEF3-211ENST00000488250 ATP6V0A2Q9Y487 856 aa18.47■□□□□ 0.55
RAPGEF3-211ENST00000488250 MORC2Q9Y6X9 1032 aaPredicted RBP18.47■□□□□ 0.55
RAPGEF3-211ENST00000488250 PPEF1O14829 653 aaPredicted RBP18.46■□□□□ 0.55
RAPGEF3-211ENST00000488250 ZNF500O60304 480 aaPredicted RBP18.46■□□□□ 0.55
RAPGEF3-211ENST00000488250 CCDC178Q5BJE1 867 aa18.46■□□□□ 0.55
RAPGEF3-211ENST00000488250 LUZP1Q86V48 1076 aa18.46■□□□□ 0.55
RAPGEF3-211ENST00000488250 DGKHQ86XP1 1220 aa18.46■□□□□ 0.55
RAPGEF3-211ENST00000488250 SLF2Q8IX21 1173 aa18.46■□□□□ 0.55
RAPGEF3-211ENST00000488250 AMOTL1Q8IY63 956 aa18.46■□□□□ 0.55
RAPGEF3-211ENST00000488250 DNAJC25Q9H1X3 360 aa18.46■□□□□ 0.55
RAPGEF3-211ENST00000488250 ANO10Q9NW15 660 aa18.46■□□□□ 0.55
RAPGEF3-211ENST00000488250 KCNJ14Q9UNX9 436 aa18.46■□□□□ 0.55
RAPGEF3-211ENST00000488250 NAV1Q8NEY1 1877 aa18.46■□□□□ 0.55
RAPGEF3-211ENST00000488250 TSPY2A6NKD2 308 aa18.45■□□□□ 0.54
RAPGEF3-211ENST00000488250 CUTAO60888 179 aa18.45■□□□□ 0.54
RAPGEF3-211ENST00000488250 PTMAP06454 111 aaKnown RBP18.45■□□□□ 0.54
RAPGEF3-211ENST00000488250 PFKFB1P16118 471 aa18.45■□□□□ 0.54
RAPGEF3-211ENST00000488250 PLCG2P16885 1265 aa18.45■□□□□ 0.54
RAPGEF3-211ENST00000488250 RCSD1Q6JBY9 416 aa18.45■□□□□ 0.54
RAPGEF3-211ENST00000488250 COL23A1Q86Y22 540 aaPredicted RBP18.45■□□□□ 0.54
RAPGEF3-211ENST00000488250 CCDC82Q8N4S0 544 aa18.45■□□□□ 0.54
RAPGEF3-211ENST00000488250 SDF4Q9BRK5 362 aa18.45■□□□□ 0.54
RAPGEF3-211ENST00000488250 TCP11L1Q9NUJ3 509 aa18.45■□□□□ 0.54
RAPGEF3-211ENST00000488250 ZNF202O95125 648 aa18.45■□□□□ 0.54
RAPGEF3-211ENST00000488250 SRGNP10124 158 aa18.45■□□□□ 0.54
RAPGEF3-211ENST00000488250 TOB1P50616 345 aaPredicted RBP18.45■□□□□ 0.54
RAPGEF3-211ENST00000488250 FAM47AQ5JRC9 791 aa18.45■□□□□ 0.54
RAPGEF3-211ENST00000488250 CTCFLQ8NI51 663 aaPredicted RBP18.45■□□□□ 0.54
RAPGEF3-211ENST00000488250 PHF20Q9BVI0 1012 aa18.45■□□□□ 0.54
RAPGEF3-211ENST00000488250 GAKO14976 1311 aa18.44■□□□□ 0.54
RAPGEF3-211ENST00000488250 MYH6P13533 1939 aa18.44■□□□□ 0.54
RAPGEF3-211ENST00000488250 PLEKHA8P1O95397 391 aa18.44■□□□□ 0.54
RAPGEF3-211ENST00000488250 NPR1P16066 1061 aa18.44■□□□□ 0.54
RAPGEF3-211ENST00000488250 MARCKSP29966 332 aaPredicted RBP18.44■□□□□ 0.54
RAPGEF3-211ENST00000488250 IQCB1Q15051 598 aa18.44■□□□□ 0.54
RAPGEF3-211ENST00000488250 RESP18Q5W5W9 173 aa18.44■□□□□ 0.54
RAPGEF3-211ENST00000488250 KIAA1468Q9P260 1216 aa18.44■□□□□ 0.54
RAPGEF3-211ENST00000488250 SUGT1Q9Y2Z0 365 aa18.44■□□□□ 0.54
RAPGEF3-211ENST00000488250 DDX60LQ5H9U9 1706 aaKnown RBP18.44■□□□□ 0.54
RAPGEF3-211ENST00000488250 NMT2O60551 498 aa18.43■□□□□ 0.54
RAPGEF3-211ENST00000488250 BTDP43251 543 aa18.43■□□□□ 0.54
RAPGEF3-211ENST00000488250 MFSD14BQ5SR56 506 aa18.43■□□□□ 0.54
RAPGEF3-211ENST00000488250 SHC4Q6S5L8 630 aa18.43■□□□□ 0.54
RAPGEF3-211ENST00000488250 COA1Q9GZY4 146 aa18.43■□□□□ 0.54
RAPGEF3-211ENST00000488250 CNTNAP5Q8WYK1 1306 aa18.43■□□□□ 0.54
RAPGEF3-211ENST00000488250 C6orf229H3BNL8 230 aa18.43■□□□□ 0.54
RAPGEF3-211ENST00000488250 APBA3O96018 575 aa18.43■□□□□ 0.54
RAPGEF3-211ENST00000488250 TFAP4Q01664 338 aa18.43■□□□□ 0.54
RAPGEF3-211ENST00000488250 TGFBRAP1Q8WUH2 860 aa18.43■□□□□ 0.54
RAPGEF3-211ENST00000488250 SHISA4Q96DD7 197 aa18.43■□□□□ 0.54
RAPGEF3-211ENST00000488250 ZNF287Q9HBT7 754 aa18.43■□□□□ 0.54
RAPGEF3-211ENST00000488250 V9GY48 417 aaPredicted RBP18.43■□□□□ 0.54
RAPGEF3-211ENST00000488250 CDK5RAP2Q96SN8 1893 aa18.42■□□□□ 0.54
RAPGEF3-211ENST00000488250 KIF5BP33176 963 aa18.42■□□□□ 0.54
RAPGEF3-211ENST00000488250 ELOA2Q8IYF1 753 aaPredicted RBP18.42■□□□□ 0.54
RAPGEF3-211ENST00000488250 SRBD1Q8N5C6 995 aaKnown RBP18.42■□□□□ 0.54
RAPGEF3-211ENST00000488250 KRI1Q8N9T8 703 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms