RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 CTNND1O60716 968 aaKnown RBP13.17□□□□□ -0.3
UBE4B-210ENST00000488228 FGAP02671 866 aa13.17□□□□□ -0.3
UBE4B-210ENST00000488228 CAP2P40123 477 aa13.17□□□□□ -0.3
UBE4B-210ENST00000488228 ECE1P42892 770 aa13.17□□□□□ -0.3
UBE4B-210ENST00000488228 CDK8P49336 464 aa13.17□□□□□ -0.3
UBE4B-210ENST00000488228 PTH1RQ03431 593 aa13.17□□□□□ -0.3
UBE4B-210ENST00000488228 CTDSPL2Q05D32 466 aa13.17□□□□□ -0.3
UBE4B-210ENST00000488228 SPRYD7Q5W111 196 aa13.17□□□□□ -0.3
UBE4B-210ENST00000488228 TATDN1Q6P1N9 297 aa13.17□□□□□ -0.3
UBE4B-210ENST00000488228 PICK1Q9NRD5 415 aa13.17□□□□□ -0.3
UBE4B-210ENST00000488228 PARP14Q460N5 1801 aa13.16□□□□□ -0.3
UBE4B-210ENST00000488228 UNCXA6NJT0 531 aa13.16□□□□□ -0.3
UBE4B-210ENST00000488228 PRDM1O75626 825 aa13.16□□□□□ -0.3
UBE4B-210ENST00000488228 GH2P01242 217 aa13.16□□□□□ -0.3
UBE4B-210ENST00000488228 ALX1Q15699 326 aa13.16□□□□□ -0.3
UBE4B-210ENST00000488228 ERO1BQ86YB8 467 aa13.16□□□□□ -0.3
UBE4B-210ENST00000488228 CLEC10AQ8IUN9 316 aa13.16□□□□□ -0.3
UBE4B-210ENST00000488228 TBC1D10CQ8IV04 446 aa13.16□□□□□ -0.3
UBE4B-210ENST00000488228 CCDC102AQ96A19 550 aa13.16□□□□□ -0.3
UBE4B-210ENST00000488228 DSCC1Q9BVC3 393 aa13.16□□□□□ -0.3
UBE4B-210ENST00000488228 NBPF3Q9H094 633 aa13.16□□□□□ -0.3
UBE4B-210ENST00000488228 SWAP70Q9UH65 585 aa13.16□□□□□ -0.3
UBE4B-210ENST00000488228 MPHOSPH10O00566 681 aaKnown RBP13.15□□□□□ -0.3
UBE4B-210ENST00000488228 IRF6O14896 467 aa13.15□□□□□ -0.3
UBE4B-210ENST00000488228 ZBTB48P10074 688 aaPredicted RBP13.15□□□□□ -0.3
UBE4B-210ENST00000488228 AKR1B1P15121 316 aa13.15□□□□□ -0.3
UBE4B-210ENST00000488228 PTPRAP18433 802 aa13.15□□□□□ -0.3
UBE4B-210ENST00000488228 RASA1P20936 1047 aa13.15□□□□□ -0.3
UBE4B-210ENST00000488228 NOGQ13253 232 aa13.15□□□□□ -0.3
UBE4B-210ENST00000488228 PPIL2Q13356 520 aa13.15□□□□□ -0.3
UBE4B-210ENST00000488228 ABCB5Q2M3G0 1257 aa13.15□□□□□ -0.3
UBE4B-210ENST00000488228 CERKLQ49MI3 558 aaPredicted RBP13.15□□□□□ -0.3
UBE4B-210ENST00000488228 CASC1Q6TDU7 716 aa13.15□□□□□ -0.3
UBE4B-210ENST00000488228 TACC3Q9Y6A5 838 aa13.15□□□□□ -0.3
UBE4B-210ENST00000488228 NEDD4P46934 1319 aa13.14□□□□□ -0.31
UBE4B-210ENST00000488228 TRIM75PA6NK02 468 aa13.14□□□□□ -0.31
UBE4B-210ENST00000488228 ASNSP08243 561 aa13.14□□□□□ -0.31
UBE4B-210ENST00000488228 KIF23Q02241 960 aaPredicted RBP13.14□□□□□ -0.31
UBE4B-210ENST00000488228 LSG1Q9H089 658 aaKnown RBP13.14□□□□□ -0.31
UBE4B-210ENST00000488228 ANO2Q9NQ90 1003 aa13.14□□□□□ -0.31
UBE4B-210ENST00000488228 INCENPQ9NQS7 918 aa13.14□□□□□ -0.31
UBE4B-210ENST00000488228 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.14□□□□□ -0.31
UBE4B-210ENST00000488228 ZHX2Q9Y6X8 837 aa13.14□□□□□ -0.31
UBE4B-210ENST00000488228 PLIN4Q96Q06 1357 aa13.13□□□□□ -0.31
UBE4B-210ENST00000488228 SLC3A2P08195 630 aaKnown RBP13.13□□□□□ -0.31
UBE4B-210ENST00000488228 GUCY1A2P33402 732 aa13.13□□□□□ -0.31
UBE4B-210ENST00000488228 PPATQ06203 517 aa13.13□□□□□ -0.31
UBE4B-210ENST00000488228 DGKZQ13574 1117 aa13.13□□□□□ -0.31
UBE4B-210ENST00000488228 SEPT2Q15019 361 aa13.13□□□□□ -0.31
UBE4B-210ENST00000488228 RAB3GAP1Q15042 981 aa13.13□□□□□ -0.31
UBE4B-210ENST00000488228 MKNK2Q9HBH9 465 aa13.13□□□□□ -0.31
UBE4B-210ENST00000488228 ANAPC4Q9UJX5 808 aa13.13□□□□□ -0.31
UBE4B-210ENST00000488228 PDE4BQ07343 736 aa13.12□□□□□ -0.31
UBE4B-210ENST00000488228 IMMTQ16891 758 aaKnown RBP13.12□□□□□ -0.31
UBE4B-210ENST00000488228 RRP12Q5JTH9 1297 aaKnown RBP13.12□□□□□ -0.31
UBE4B-210ENST00000488228 KIAA1211Q6ZU35 1233 aa13.12□□□□□ -0.31
UBE4B-210ENST00000488228 NKX2-3Q8TAU0 364 aa13.12□□□□□ -0.31
UBE4B-210ENST00000488228 BRI3BPQ8WY22 251 aa13.12□□□□□ -0.31
UBE4B-210ENST00000488228 TOMM22Q9NS69 142 aa13.12□□□□□ -0.31
UBE4B-210ENST00000488228 TAOK2Q9UL54 1235 aa13.12□□□□□ -0.31
UBE4B-210ENST00000488228 KCNH4Q9UQ05 1017 aa13.12□□□□□ -0.31
UBE4B-210ENST00000488228 RBM8AQ9Y5S9 174 aaKnown RBP13.12□□□□□ -0.31
UBE4B-210ENST00000488228 TAF6LQ9Y6J9 622 aa13.12□□□□□ -0.31
UBE4B-210ENST00000488228 U3KPZ7 1027 aaPredicted RBP13.12□□□□□ -0.31
UBE4B-210ENST00000488228 ZSWIM8A7E2V4 1837 aa13.11□□□□□ -0.31
UBE4B-210ENST00000488228 CCL15-CCL14A0A0B4J2E2 113 aa13.11□□□□□ -0.31
UBE4B-210ENST00000488228 USP17L5A8MUK1 530 aa13.11□□□□□ -0.31
UBE4B-210ENST00000488228 MAP2K2P36507 400 aa13.11□□□□□ -0.31
UBE4B-210ENST00000488228 SNAPC2Q13487 334 aa13.11□□□□□ -0.31
UBE4B-210ENST00000488228 MTMR2Q13614 643 aa13.11□□□□□ -0.31
UBE4B-210ENST00000488228 CCL15Q16663 113 aa13.11□□□□□ -0.31
UBE4B-210ENST00000488228 FAM47AQ5JRC9 791 aa13.11□□□□□ -0.31
UBE4B-210ENST00000488228 TMEM179Q6ZVK1 233 aa13.11□□□□□ -0.31
UBE4B-210ENST00000488228 MS4A4AQ96JQ5 239 aa13.11□□□□□ -0.31
UBE4B-210ENST00000488228 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.11□□□□□ -0.31
UBE4B-210ENST00000488228 CABP5Q9NP86 173 aa13.11□□□□□ -0.31
UBE4B-210ENST00000488228 CTNNA3Q9UI47 895 aa13.11□□□□□ -0.31
UBE4B-210ENST00000488228 AFG3L2Q9Y4W6 797 aa13.11□□□□□ -0.31
UBE4B-210ENST00000488228 A0A0G2JMZ2 1700 aa13.1□□□□□ -0.31
UBE4B-210ENST00000488228 RLFQ13129 1914 aa13.1□□□□□ -0.31
UBE4B-210ENST00000488228 MANSC4A6NHS7 340 aaPredicted RBP13.1□□□□□ -0.31
UBE4B-210ENST00000488228 IGF2BP3O00425 579 aaKnown RBP eCLIP13.1□□□□□ -0.31
UBE4B-210ENST00000488228 ZNF213O14771 459 aa13.1□□□□□ -0.31
UBE4B-210ENST00000488228 ORC4O43929 436 aa13.1□□□□□ -0.31
UBE4B-210ENST00000488228 RANBP6O60518 1105 aaKnown RBP13.1□□□□□ -0.31
UBE4B-210ENST00000488228 CYP21A2P08686 494 aa13.1□□□□□ -0.31
UBE4B-210ENST00000488228 GTF2A2P52657 109 aa13.1□□□□□ -0.31
UBE4B-210ENST00000488228 HMGCS2P54868 508 aa13.1□□□□□ -0.31
UBE4B-210ENST00000488228 ICA1Q05084 483 aa13.1□□□□□ -0.31
UBE4B-210ENST00000488228 SREBF2Q12772 1141 aa13.1□□□□□ -0.31
UBE4B-210ENST00000488228 SPP2Q13103 211 aa13.1□□□□□ -0.31
UBE4B-210ENST00000488228 ZYXQ15942 572 aaKnown RBP13.1□□□□□ -0.31
UBE4B-210ENST00000488228 AKNAD1Q5T1N1 836 aa13.1□□□□□ -0.31
UBE4B-210ENST00000488228 JMYQ8N9B5 988 aa13.1□□□□□ -0.31
UBE4B-210ENST00000488228 ZNF280CQ8ND82 737 aa13.1□□□□□ -0.31
UBE4B-210ENST00000488228 ACER1Q8TDN7 264 aa13.1□□□□□ -0.31
UBE4B-210ENST00000488228 STAG1Q8WVM7 1258 aa13.1□□□□□ -0.31
UBE4B-210ENST00000488228 MAP4K1Q92918 833 aa13.1□□□□□ -0.31
UBE4B-210ENST00000488228 CCDC17Q96LX7 622 aa13.1□□□□□ -0.31
UBE4B-210ENST00000488228 FEZ1Q99689 392 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms