RNA–Protein interactions for RNA: ENST00000488193.5

TFAP2A-215, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 1 (best)

Gene TFAP2A, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-215ENST00000488193 FANCBQ8NB91 859 aa16.86■□□□□ 0.29
TFAP2A-215ENST00000488193 ANKS1AQ92625 1134 aa16.86■□□□□ 0.29
TFAP2A-215ENST00000488193 GZF1Q9H116 711 aaPredicted RBP16.86■□□□□ 0.29
TFAP2A-215ENST00000488193 MYH15Q9Y2K3 1946 aa16.86■□□□□ 0.29
TFAP2A-215ENST00000488193 GABPAQ06546 454 aa16.86■□□□□ 0.29
TFAP2A-215ENST00000488193 FUT2Q10981 343 aa16.86■□□□□ 0.29
TFAP2A-215ENST00000488193 PICALMQ13492 652 aa16.86■□□□□ 0.29
TFAP2A-215ENST00000488193 RTN1Q16799 776 aa16.86■□□□□ 0.29
TFAP2A-215ENST00000488193 DALRD3Q5D0E6 543 aaKnown RBP16.86■□□□□ 0.29
TFAP2A-215ENST00000488193 SYNE3Q6ZMZ3 975 aa16.86■□□□□ 0.29
TFAP2A-215ENST00000488193 FBXO18Q8NFZ0 1043 aa16.86■□□□□ 0.29
TFAP2A-215ENST00000488193 GMLQ99445 158 aa16.86■□□□□ 0.29
TFAP2A-215ENST00000488193 KIF3AQ9Y496 699 aa16.86■□□□□ 0.29
TFAP2A-215ENST00000488193 DDX49Q9Y6V7 483 aaKnown RBP16.86■□□□□ 0.29
TFAP2A-215ENST00000488193 TSPY2A6NKD2 308 aa16.85■□□□□ 0.29
TFAP2A-215ENST00000488193 NT5C2P49902 561 aa16.85■□□□□ 0.29
TFAP2A-215ENST00000488193 ZFPM1Q8IX07 1006 aa16.85■□□□□ 0.29
TFAP2A-215ENST00000488193 AMOTL1Q8IY63 956 aa16.85■□□□□ 0.29
TFAP2A-215ENST00000488193 CMTR1Q8N1G2 835 aaKnown RBP16.85■□□□□ 0.29
TFAP2A-215ENST00000488193 LARGE2Q8N3Y3 721 aa16.85■□□□□ 0.29
TFAP2A-215ENST00000488193 VPS33BQ9H267 617 aa16.85■□□□□ 0.29
TFAP2A-215ENST00000488193 TCP11L1Q9NUJ3 509 aa16.85■□□□□ 0.29
TFAP2A-215ENST00000488193 SERPINA10Q9UK55 444 aa16.85■□□□□ 0.29
TFAP2A-215ENST00000488193 SIPA1L1O43166 1804 aa16.85■□□□□ 0.29
TFAP2A-215ENST00000488193 FMNL1O95466 1100 aaPredicted RBP16.84■□□□□ 0.29
TFAP2A-215ENST00000488193 VIL1P09327 827 aaKnown RBP16.84■□□□□ 0.29
TFAP2A-215ENST00000488193 NUP133Q8WUM0 1156 aa16.84■□□□□ 0.29
TFAP2A-215ENST00000488193 OSBPL5Q9H0X9 879 aaPredicted RBP16.84■□□□□ 0.29
TFAP2A-215ENST00000488193 MKNK2Q9HBH9 465 aa16.84■□□□□ 0.29
TFAP2A-215ENST00000488193 CD2APQ9Y5K6 639 aa16.84■□□□□ 0.29
TFAP2A-215ENST00000488193 STK36Q9NRP7 1315 aa16.84■□□□□ 0.29
TFAP2A-215ENST00000488193 RAD17O75943 681 aa16.84■□□□□ 0.29
TFAP2A-215ENST00000488193 CDKL5O76039 1030 aa16.84■□□□□ 0.29
TFAP2A-215ENST00000488193 GUCY1A2P33402 732 aa16.84■□□□□ 0.29
TFAP2A-215ENST00000488193 IARSP41252 1262 aaKnown RBP16.84■□□□□ 0.29
TFAP2A-215ENST00000488193 SOGA3Q5TF21 947 aa16.84■□□□□ 0.29
TFAP2A-215ENST00000488193 CRACR2BQ8N4Y2 399 aaPredicted RBP16.84■□□□□ 0.29
TFAP2A-215ENST00000488193 ZSCAN16Q9H4T2 348 aaPredicted RBP16.84■□□□□ 0.29
TFAP2A-215ENST00000488193 NFKBIEO00221 500 aa16.83■□□□□ 0.28
TFAP2A-215ENST00000488193 PSMD14O00487 310 aa16.83■□□□□ 0.28
TFAP2A-215ENST00000488193 FIBPO43427 364 aa16.83■□□□□ 0.28
TFAP2A-215ENST00000488193 CACNB3P54284 484 aa16.83■□□□□ 0.28
TFAP2A-215ENST00000488193 RSBN1LQ6PCB5 846 aaPredicted RBP16.83■□□□□ 0.28
TFAP2A-215ENST00000488193 TTC6Q86TZ1 520 aa16.83■□□□□ 0.28
TFAP2A-215ENST00000488193 RGS22Q8NE09 1264 aa16.83■□□□□ 0.28
TFAP2A-215ENST00000488193 C8orf76Q96K31 380 aa16.83■□□□□ 0.28
TFAP2A-215ENST00000488193 ALG1Q9BT22 464 aa16.83■□□□□ 0.28
TFAP2A-215ENST00000488193 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.83■□□□□ 0.28
TFAP2A-215ENST00000488193 FAM198AQ9UFP1 575 aa16.83■□□□□ 0.28
TFAP2A-215ENST00000488193 DDAH1O94760 285 aa16.82■□□□□ 0.28
TFAP2A-215ENST00000488193 CPLX2Q6PUV4 134 aaKnown RBP16.82■□□□□ 0.28
TFAP2A-215ENST00000488193 CATIPQ7Z7H3 387 aa16.82■□□□□ 0.28
TFAP2A-215ENST00000488193 DGKHQ86XP1 1220 aa16.82■□□□□ 0.28
TFAP2A-215ENST00000488193 ZNF444Q8N0Y2 327 aaPredicted RBP16.82■□□□□ 0.28
TFAP2A-215ENST00000488193 IDI2Q9BXS1 227 aa16.82■□□□□ 0.28
TFAP2A-215ENST00000488193 SLC26A6Q9BXS9 759 aa16.82■□□□□ 0.28
TFAP2A-215ENST00000488193 TFIP11Q9UBB9 837 aaKnown RBP16.82■□□□□ 0.28
TFAP2A-215ENST00000488193 PPP1R1BQ9UD71 204 aaPredicted RBP16.82■□□□□ 0.28
TFAP2A-215ENST00000488193 PLEKHA8P1O95397 391 aa16.82■□□□□ 0.28
TFAP2A-215ENST00000488193 SLURP2P0DP57 97 aa16.82■□□□□ 0.28
TFAP2A-215ENST00000488193 NCLP19338 710 aaKnown RBP16.82■□□□□ 0.28
TFAP2A-215ENST00000488193 PPP2R5BQ15173 497 aa16.82■□□□□ 0.28
TFAP2A-215ENST00000488193 SH3BP5LQ7L8J4 393 aa16.82■□□□□ 0.28
TFAP2A-215ENST00000488193 NEDD1Q8NHV4 660 aa16.82■□□□□ 0.28
TFAP2A-215ENST00000488193 PRMT6Q96LA8 375 aaPredicted RBP16.82■□□□□ 0.28
TFAP2A-215ENST00000488193 ZNRF3Q9ULT6 936 aa16.82■□□□□ 0.28
TFAP2A-215ENST00000488193 CCDC196A0A1B0GTZ2 297 aa16.81■□□□□ 0.28
TFAP2A-215ENST00000488193 KIF28PB7ZC32 967 aa16.81■□□□□ 0.28
TFAP2A-215ENST00000488193 TSPY3P0CV98 308 aa16.81■□□□□ 0.28
TFAP2A-215ENST00000488193 TSPY8P0CW00 308 aa16.81■□□□□ 0.28
TFAP2A-215ENST00000488193 NOVP48745 357 aa16.81■□□□□ 0.28
TFAP2A-215ENST00000488193 SSRP1Q08945 709 aaKnown RBP16.81■□□□□ 0.28
TFAP2A-215ENST00000488193 CFAP100Q494V2 611 aa16.81■□□□□ 0.28
TFAP2A-215ENST00000488193 CCDC82Q8N4S0 544 aa16.81■□□□□ 0.28
TFAP2A-215ENST00000488193 SHISA4Q96DD7 197 aa16.81■□□□□ 0.28
TFAP2A-215ENST00000488193 RBM27Q9P2N5 1060 aaKnown RBP16.81■□□□□ 0.28
TFAP2A-215ENST00000488193 MYH6P13533 1939 aa16.81■□□□□ 0.28
TFAP2A-215ENST00000488193 DEKP35659 375 aaKnown RBP16.8■□□□□ 0.28
TFAP2A-215ENST00000488193 PRELPP51888 382 aa16.8■□□□□ 0.28
TFAP2A-215ENST00000488193 KRT85P78386 507 aa16.8■□□□□ 0.28
TFAP2A-215ENST00000488193 KRT40Q6A162 431 aa16.8■□□□□ 0.28
TFAP2A-215ENST00000488193 ZBTB12Q9Y330 459 aaPredicted RBP16.8■□□□□ 0.28
TFAP2A-215ENST00000488193 BAZ2BQ9UIF8 2168 aaKnown RBP16.8■□□□□ 0.28
TFAP2A-215ENST00000488193 NPM3O75607 178 aaKnown RBP16.8■□□□□ 0.28
TFAP2A-215ENST00000488193 CALM1P0DP23 149 aa16.8■□□□□ 0.28
TFAP2A-215ENST00000488193 CALM2P0DP24 149 aa16.8■□□□□ 0.28
TFAP2A-215ENST00000488193 CALM3P0DP25 149 aa16.8■□□□□ 0.28
TFAP2A-215ENST00000488193 RBM5P52756 815 aaKnown RBP eCLIP16.8■□□□□ 0.28
TFAP2A-215ENST00000488193 KIF23Q02241 960 aaPredicted RBP16.8■□□□□ 0.28
TFAP2A-215ENST00000488193 PKN1Q16512 942 aa16.8■□□□□ 0.28
TFAP2A-215ENST00000488193 TMTC3Q6ZXV5 915 aa16.8■□□□□ 0.28
TFAP2A-215ENST00000488193 NLGN2Q8NFZ4 835 aa16.8■□□□□ 0.28
TFAP2A-215ENST00000488193 LEO1Q8WVC0 666 aaPredicted RBP16.8■□□□□ 0.28
TFAP2A-215ENST00000488193 TDRD3Q9H7E2 651 aaKnown RBP16.8■□□□□ 0.28
TFAP2A-215ENST00000488193 ZNF287Q9HBT7 754 aa16.8■□□□□ 0.28
TFAP2A-215ENST00000488193 TMEM63CQ9P1W3 806 aa16.8■□□□□ 0.28
TFAP2A-215ENST00000488193 MYH8P13535 1937 aa16.8■□□□□ 0.28
TFAP2A-215ENST00000488193 GREB1LQ9C091 1923 aaPredicted RBP16.79■□□□□ 0.28
TFAP2A-215ENST00000488193 ELP1O95163 1332 aa16.79■□□□□ 0.28
TFAP2A-215ENST00000488193 MYO3BQ8WXR4 1341 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms