RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 ALPK1Q96QP1 1244 aa7.06□□□□□ -1.28
SMC4-220ENST00000488017 EPB41L4BQ9H329 900 aa7.06□□□□□ -1.28
SMC4-220ENST00000488017 DCP1AQ9NPI6 582 aaPredicted RBP7.06□□□□□ -1.28
SMC4-220ENST00000488017 PPM1HQ9ULR3 514 aa7.06□□□□□ -1.28
SMC4-220ENST00000488017 TPX2Q9ULW0 747 aaKnown RBP7.06□□□□□ -1.28
SMC4-220ENST00000488017 PCDHA4Q9UN74 947 aa7.06□□□□□ -1.28
SMC4-220ENST00000488017 ST14Q9Y5Y6 855 aa7.06□□□□□ -1.28
SMC4-220ENST00000488017 CAPN6Q9Y6Q1 641 aa7.06□□□□□ -1.28
SMC4-220ENST00000488017 PRR33A8MZF0 331 aa7.05□□□□□ -1.28
SMC4-220ENST00000488017 H3BS24 57 aa7.05□□□□□ -1.28
SMC4-220ENST00000488017 RAC2P15153 192 aa7.05□□□□□ -1.28
SMC4-220ENST00000488017 GLDCP23378 1020 aa7.05□□□□□ -1.28
SMC4-220ENST00000488017 GSTT1P30711 240 aa7.05□□□□□ -1.28
SMC4-220ENST00000488017 CAP2P40123 477 aa7.05□□□□□ -1.28
SMC4-220ENST00000488017 ZNF746Q6NUN9 644 aaPredicted RBP7.05□□□□□ -1.28
SMC4-220ENST00000488017 MFSD2AQ8NA29 543 aa7.05□□□□□ -1.28
SMC4-220ENST00000488017 ABHD4Q8TB40 342 aa7.05□□□□□ -1.28
SMC4-220ENST00000488017 ELMO3Q96BJ8 720 aa7.05□□□□□ -1.28
SMC4-220ENST00000488017 NUAK1O60285 661 aa7.04□□□□□ -1.28
SMC4-220ENST00000488017 FGD1P98174 961 aa7.04□□□□□ -1.28
SMC4-220ENST00000488017 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.04□□□□□ -1.28
SMC4-220ENST00000488017 TPTE2Q6XPS3 522 aa7.04□□□□□ -1.28
SMC4-220ENST00000488017 ANKRD24Q8TF21 1146 aa7.04□□□□□ -1.28
SMC4-220ENST00000488017 COX4I2Q96KJ9 171 aa7.04□□□□□ -1.28
SMC4-220ENST00000488017 SLC26A8Q96RN1 970 aa7.04□□□□□ -1.28
SMC4-220ENST00000488017 SRCIN1Q9C0H9 1055 aa7.04□□□□□ -1.28
SMC4-220ENST00000488017 CYP8B1Q9UNU6 501 aa7.04□□□□□ -1.28
SMC4-220ENST00000488017 SMG5Q9UPR3 1016 aaKnown RBP7.04□□□□□ -1.28
SMC4-220ENST00000488017 LINC00310P59036 64 aa7.03□□□□□ -1.28
SMC4-220ENST00000488017 KRTAP10-2P60368 255 aa7.03□□□□□ -1.28
SMC4-220ENST00000488017 SLBPQ14493 270 aaKnown RBP eCLIP7.03□□□□□ -1.28
SMC4-220ENST00000488017 TMC7Q7Z402 723 aa7.03□□□□□ -1.28
SMC4-220ENST00000488017 TTC6Q86TZ1 520 aa7.03□□□□□ -1.28
SMC4-220ENST00000488017 MIPEPQ99797 713 aa7.03□□□□□ -1.28
SMC4-220ENST00000488017 CNTNAP4Q9C0A0 1308 aa7.02□□□□□ -1.28
SMC4-220ENST00000488017 A0A0G2JLL6 359 aaPredicted RBP7.02□□□□□ -1.29
SMC4-220ENST00000488017 PAGE1O75459 146 aa7.02□□□□□ -1.29
SMC4-220ENST00000488017 SRFP11831 508 aa7.02□□□□□ -1.29
SMC4-220ENST00000488017 SYN1P17600 705 aa7.02□□□□□ -1.29
SMC4-220ENST00000488017 SLAMF8Q9P0V8 285 aa7.02□□□□□ -1.29
SMC4-220ENST00000488017 ETV2O00321 342 aaPredicted RBP7.01□□□□□ -1.29
SMC4-220ENST00000488017 KIR3DL1P43629 444 aa7.01□□□□□ -1.29
SMC4-220ENST00000488017 ENOX2Q16206 610 aaKnown RBP7.01□□□□□ -1.29
SMC4-220ENST00000488017 TMPRSS7Q7RTY8 843 aa7.01□□□□□ -1.29
SMC4-220ENST00000488017 GGNQ86UU5 652 aa7.01□□□□□ -1.29
SMC4-220ENST00000488017 UBE2FQ969M7 185 aa7.01□□□□□ -1.29
SMC4-220ENST00000488017 WNT10AQ9GZT5 417 aa7.01□□□□□ -1.29
SMC4-220ENST00000488017 FBRSQ9HAH7 460 aa7.01□□□□□ -1.29
SMC4-220ENST00000488017 PNMA6FA0A0J9YX94 578 aa7□□□□□ -1.29
SMC4-220ENST00000488017 CYP7A1P22680 504 aa7□□□□□ -1.29
SMC4-220ENST00000488017 DSC3Q14574 896 aa7□□□□□ -1.29
SMC4-220ENST00000488017 LETMD1Q6P1Q0 360 aa7□□□□□ -1.29
SMC4-220ENST00000488017 LRFN4Q6PJG9 635 aa7□□□□□ -1.29
SMC4-220ENST00000488017 HDXQ7Z353 690 aa7□□□□□ -1.29
SMC4-220ENST00000488017 MYLIPQ8WY64 445 aa7□□□□□ -1.29
SMC4-220ENST00000488017 ZCCHC4Q9H5U6 513 aa7□□□□□ -1.29
SMC4-220ENST00000488017 PRAMEF27A3QJZ7 478 aa6.99□□□□□ -1.29
SMC4-220ENST00000488017 HPXP02790 462 aa6.99□□□□□ -1.29
SMC4-220ENST00000488017 PLCB3Q01970 1234 aa6.99□□□□□ -1.29
SMC4-220ENST00000488017 INPP5AQ14642 412 aa6.99□□□□□ -1.29
SMC4-220ENST00000488017 RASIP1Q5U651 963 aa6.99□□□□□ -1.29
SMC4-220ENST00000488017 HID1Q8IV36 788 aa6.99□□□□□ -1.29
SMC4-220ENST00000488017 FBF1Q8TES7 1133 aa6.99□□□□□ -1.29
SMC4-220ENST00000488017 KCNN1Q92952 543 aa6.99□□□□□ -1.29
SMC4-220ENST00000488017 C1orf115Q9H7X2 142 aa6.99□□□□□ -1.29
SMC4-220ENST00000488017 KCNK12Q9HB15 430 aa6.99□□□□□ -1.29
SMC4-220ENST00000488017 ZSWIM5Q9P217 1185 aa6.99□□□□□ -1.29
SMC4-220ENST00000488017 TMEM59LQ9UK28 342 aa6.99□□□□□ -1.29
SMC4-220ENST00000488017 SNCAIPQ9Y6H5 919 aa6.99□□□□□ -1.29
SMC4-220ENST00000488017 GIPC1O14908 333 aa6.98□□□□□ -1.29
SMC4-220ENST00000488017 CBX7O95931 251 aa6.98□□□□□ -1.29
SMC4-220ENST00000488017 NKG7Q16617 165 aa6.98□□□□□ -1.29
SMC4-220ENST00000488017 PIWIL2Q8TC59 973 aaKnown RBP6.98□□□□□ -1.29
SMC4-220ENST00000488017 PLPPR2Q96GM1 343 aa6.98□□□□□ -1.29
SMC4-220ENST00000488017 IRF2BPLQ9H1B7 796 aa6.98□□□□□ -1.29
SMC4-220ENST00000488017 DCTN4Q9UJW0 460 aa6.98□□□□□ -1.29
SMC4-220ENST00000488017 DNAJC25-GNG10A0A024R161 153 aa6.97□□□□□ -1.29
SMC4-220ENST00000488017 CST3P01034 146 aaPredicted RBP6.97□□□□□ -1.29
SMC4-220ENST00000488017 PCNX4Q63HM2 1172 aa6.97□□□□□ -1.29
SMC4-220ENST00000488017 RIN3Q8TB24 985 aa6.97□□□□□ -1.29
SMC4-220ENST00000488017 TREHO43280 583 aa6.96□□□□□ -1.3
SMC4-220ENST00000488017 PSPNO60542 156 aa6.96□□□□□ -1.3
SMC4-220ENST00000488017 FBXO24O75426 580 aa6.96□□□□□ -1.3
SMC4-220ENST00000488017 ESR1P03372 595 aa6.96□□□□□ -1.3
SMC4-220ENST00000488017 BMP7P18075 431 aa6.96□□□□□ -1.3
SMC4-220ENST00000488017 ETF1P62495 437 aaKnown RBP6.96□□□□□ -1.3
SMC4-220ENST00000488017 TNK2Q07912 1038 aa6.96□□□□□ -1.3
SMC4-220ENST00000488017 NFIXQ14938 502 aa6.96□□□□□ -1.3
SMC4-220ENST00000488017 RALGPS1Q5JS13 557 aa6.96□□□□□ -1.3
SMC4-220ENST00000488017 TMPRSS5Q9H3S3 457 aa6.96□□□□□ -1.3
SMC4-220ENST00000488017 SOWAHDA6NJG2 315 aa6.95□□□□□ -1.3
SMC4-220ENST00000488017 HK2P52789 917 aa6.95□□□□□ -1.3
SMC4-220ENST00000488017 ERVFC1P60507 584 aa6.95□□□□□ -1.3
SMC4-220ENST00000488017 NFKB2Q00653 900 aa6.95□□□□□ -1.3
SMC4-220ENST00000488017 PRAMEF13Q5VWM6 474 aa6.95□□□□□ -1.3
SMC4-220ENST00000488017 BORCS6Q96GS4 357 aa6.95□□□□□ -1.3
SMC4-220ENST00000488017 KCNC2Q96PR1 638 aa6.95□□□□□ -1.3
SMC4-220ENST00000488017 TACC3Q9Y6A5 838 aa6.95□□□□□ -1.3
SMC4-220ENST00000488017 CELA3AP09093 270 aa6.94□□□□□ -1.3
SMC4-220ENST00000488017 PTPN11Q06124 597 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms