RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 PPM1HQ9ULR3 514 aa7.87□□□□□ -1.15
BRCA1-217ENST00000487825 OAS3Q9Y6K5 1087 aaKnown RBP7.87□□□□□ -1.15
BRCA1-217ENST00000487825 ABCA6Q8N139 1617 aa7.87□□□□□ -1.15
BRCA1-217ENST00000487825 SAMD9Q5K651 1589 aa7.87□□□□□ -1.15
BRCA1-217ENST00000487825 CEP170BQ9Y4F5 1589 aaPredicted RBP7.86□□□□□ -1.15
BRCA1-217ENST00000487825 ANKRD33BA6NCL7 494 aa7.86□□□□□ -1.15
BRCA1-217ENST00000487825 TOM1O60784 492 aa7.86□□□□□ -1.15
BRCA1-217ENST00000487825 CYP27A1Q02318 531 aa7.86□□□□□ -1.15
BRCA1-217ENST00000487825 MSMPQ1L6U9 139 aa7.86□□□□□ -1.15
BRCA1-217ENST00000487825 SSU72Q9NP77 194 aaKnown RBP7.86□□□□□ -1.15
BRCA1-217ENST00000487825 FAM8A1Q9UBU6 413 aa7.86□□□□□ -1.15
BRCA1-217ENST00000487825 SAMM50Q9Y512 469 aa7.86□□□□□ -1.15
BRCA1-217ENST00000487825 CSADQ9Y600 493 aa7.86□□□□□ -1.15
BRCA1-217ENST00000487825 NUP153P49790 1475 aaKnown RBP7.86□□□□□ -1.15
BRCA1-217ENST00000487825 NPATQ14207 1427 aa7.86□□□□□ -1.15
BRCA1-217ENST00000487825 CELA3AP09093 270 aa7.85□□□□□ -1.15
BRCA1-217ENST00000487825 ZC3H12AQ5D1E8 599 aaKnown RBP7.85□□□□□ -1.15
BRCA1-217ENST00000487825 RASIP1Q5U651 963 aa7.85□□□□□ -1.15
BRCA1-217ENST00000487825 OGFOD3Q6PK18 319 aa7.85□□□□□ -1.15
BRCA1-217ENST00000487825 RNF19AQ9NV58 838 aa7.85□□□□□ -1.15
BRCA1-217ENST00000487825 SCAPERQ9BY12 1400 aa7.85□□□□□ -1.15
BRCA1-217ENST00000487825 NEFMP07197 916 aa7.84□□□□□ -1.15
BRCA1-217ENST00000487825 ANGEL1Q9UNK9 670 aaKnown RBP7.84□□□□□ -1.15
BRCA1-217ENST00000487825 TTF2Q9UNY4 1162 aaKnown RBP7.84□□□□□ -1.15
BRCA1-217ENST00000487825 RNF17Q9BXT8 1623 aaKnown RBP7.84□□□□□ -1.15
BRCA1-217ENST00000487825 PTPRKQ15262 1439 aa7.84□□□□□ -1.15
BRCA1-217ENST00000487825 CNTLNQ9NXG0 1405 aa7.84□□□□□ -1.15
BRCA1-217ENST00000487825 ZNF518AQ6AHZ1 1483 aa7.83□□□□□ -1.16
BRCA1-217ENST00000487825 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-217ENST00000487825 PRPF40AO75400 957 aaKnown RBP7.83□□□□□ -1.16
BRCA1-217ENST00000487825 FAM87AP0C7U9 286 aa7.83□□□□□ -1.16
BRCA1-217ENST00000487825 GNA15P30679 374 aa7.83□□□□□ -1.16
BRCA1-217ENST00000487825 LLGL2Q6P1M3 1020 aa7.83□□□□□ -1.16
BRCA1-217ENST00000487825 ISL2Q96A47 359 aa7.83□□□□□ -1.16
BRCA1-217ENST00000487825 DUSP9Q99956 384 aaKnown RBP7.83□□□□□ -1.16
BRCA1-217ENST00000487825 KRTAP9-2Q9BYQ4 174 aa7.83□□□□□ -1.16
BRCA1-217ENST00000487825 ZC3H7BQ9UGR2 993 aaKnown RBP7.83□□□□□ -1.16
BRCA1-217ENST00000487825 PCOLCE2Q9UKZ9 415 aa7.83□□□□□ -1.16
BRCA1-217ENST00000487825 NEURL4Q96JN8 1562 aa7.83□□□□□ -1.16
BRCA1-217ENST00000487825 DCDC2CA8MYV0 355 aa7.82□□□□□ -1.16
BRCA1-217ENST00000487825 TRIM37O94972 964 aa7.82□□□□□ -1.16
BRCA1-217ENST00000487825 EIF4BP23588 611 aaKnown RBP7.82□□□□□ -1.16
BRCA1-217ENST00000487825 IRAK1P51617 712 aa7.82□□□□□ -1.16
BRCA1-217ENST00000487825 ERVK-24P63145 666 aa7.82□□□□□ -1.16
BRCA1-217ENST00000487825 LRRC14Q15048 493 aa7.82□□□□□ -1.16
BRCA1-217ENST00000487825 EAPPQ56P03 285 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-217ENST00000487825 PPM1JQ5JR12 505 aa7.82□□□□□ -1.16
BRCA1-217ENST00000487825 PCNX4Q63HM2 1172 aa7.82□□□□□ -1.16
BRCA1-217ENST00000487825 C12orf40Q86WS4 652 aa7.82□□□□□ -1.16
BRCA1-217ENST00000487825 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.82□□□□□ -1.16
BRCA1-217ENST00000487825 RNF214Q8ND24 703 aa7.82□□□□□ -1.16
BRCA1-217ENST00000487825 PICK1Q9NRD5 415 aa7.82□□□□□ -1.16
BRCA1-217ENST00000487825 CACNA2D2Q9NY47 1150 aa7.82□□□□□ -1.16
BRCA1-217ENST00000487825 CCDC39Q9UFE4 941 aa7.82□□□□□ -1.16
BRCA1-217ENST00000487825 SHANK2Q9UPX8 1470 aa7.81□□□□□ -1.16
BRCA1-217ENST00000487825 SYNMO15061 1565 aa7.81□□□□□ -1.16
BRCA1-217ENST00000487825 VWDEQ8N2E2 1590 aa7.81□□□□□ -1.16
BRCA1-217ENST00000487825 CYP27C1Q4G0S4 372 aa7.81□□□□□ -1.16
BRCA1-217ENST00000487825 FRMD6Q96NE9 622 aa7.81□□□□□ -1.16
BRCA1-217ENST00000487825 BSDC1Q9NW68 430 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-217ENST00000487825 PCDHA4Q9UN74 947 aa7.81□□□□□ -1.16
BRCA1-217ENST00000487825 CLTCQ00610 1675 aaKnown RBP7.81□□□□□ -1.16
BRCA1-217ENST00000487825 STRCP1A6NGW2 1772 aa7.81□□□□□ -1.16
BRCA1-217ENST00000487825 PLCH2O75038 1416 aa7.8□□□□□ -1.16
BRCA1-217ENST00000487825 LEFTY1O75610 366 aa7.8□□□□□ -1.16
BRCA1-217ENST00000487825 MCTP1Q6DN14 999 aa7.8□□□□□ -1.16
BRCA1-217ENST00000487825 FAM181AQ8N9Y4 354 aa7.8□□□□□ -1.16
BRCA1-217ENST00000487825 ANKRD24Q8TF21 1146 aa7.8□□□□□ -1.16
BRCA1-217ENST00000487825 CYP8B1Q9UNU6 501 aa7.8□□□□□ -1.16
BRCA1-217ENST00000487825 AK5Q9Y6K8 562 aa7.8□□□□□ -1.16
BRCA1-217ENST00000487825 DNMT1P26358 1616 aaKnown RBP7.8□□□□□ -1.16
BRCA1-217ENST00000487825 KIDINS220Q9ULH0 1771 aa7.79□□□□□ -1.16
BRCA1-217ENST00000487825 KRTAP9-6A0A140TA67 174 aa7.79□□□□□ -1.16
BRCA1-217ENST00000487825 PTPN11Q06124 597 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-217ENST00000487825 COL19A1Q14993 1142 aa7.79□□□□□ -1.16
BRCA1-217ENST00000487825 SV2BQ7L1I2 683 aa7.79□□□□□ -1.16
BRCA1-217ENST00000487825 VSIG10LQ86VR7 867 aa7.79□□□□□ -1.16
BRCA1-217ENST00000487825 FAM9AQ8IZU1 332 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-217ENST00000487825 PRNPP04156 253 aa7.78□□□□□ -1.16
BRCA1-217ENST00000487825 CCDC85BQ15834 202 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-217ENST00000487825 UBE3DQ7Z6J8 389 aa7.78□□□□□ -1.16
BRCA1-217ENST00000487825 TP53INP2Q8IXH6 220 aa7.78□□□□□ -1.16
BRCA1-217ENST00000487825 ABI1Q8IZP0 508 aa7.78□□□□□ -1.16
BRCA1-217ENST00000487825 DUSP23Q9BVJ7 150 aa7.78□□□□□ -1.16
BRCA1-217ENST00000487825 PARP2Q9UGN5 583 aa7.78□□□□□ -1.16
BRCA1-217ENST00000487825 MLH3Q9UHC1 1453 aa7.78□□□□□ -1.16
BRCA1-217ENST00000487825 XIRP1Q702N8 1843 aaKnown RBP7.78□□□□□ -1.16
BRCA1-217ENST00000487825 ITSN2Q9NZM3 1697 aa7.77□□□□□ -1.17
BRCA1-217ENST00000487825 INPP5AQ14642 412 aa7.77□□□□□ -1.17
BRCA1-217ENST00000487825 MAP3K11Q16584 847 aa7.77□□□□□ -1.17
BRCA1-217ENST00000487825 TTBK2Q6IQ55 1244 aa7.77□□□□□ -1.17
BRCA1-217ENST00000487825 NFXL1Q6ZNB6 911 aa7.77□□□□□ -1.17
BRCA1-217ENST00000487825 NPAS4Q8IUM7 802 aa7.77□□□□□ -1.17
BRCA1-217ENST00000487825 TOP6BLQ8N6T0 577 aa7.77□□□□□ -1.17
BRCA1-217ENST00000487825 FLCNQ8NFG4 579 aa7.77□□□□□ -1.17
BRCA1-217ENST00000487825 ELMO3Q96BJ8 720 aa7.77□□□□□ -1.17
BRCA1-217ENST00000487825 CDC42BPBQ9Y5S2 1711 aa7.76□□□□□ -1.17
BRCA1-217ENST00000487825 PLEKHD1A6NEE1 506 aa7.76□□□□□ -1.17
BRCA1-217ENST00000487825 TAL1P17542 331 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-217ENST00000487825 NTF4P34130 210 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms