RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 PRAMEF13Q5VWM6 474 aa7.43□□□□□ -1.22
CCDC66-221ENST00000487739 LETMD1Q6P1Q0 360 aa7.43□□□□□ -1.22
CCDC66-221ENST00000487739 FLAD1Q8NFF5 587 aa7.43□□□□□ -1.22
CCDC66-221ENST00000487739 PRDM7Q9NQW5 492 aa7.43□□□□□ -1.22
CCDC66-221ENST00000487739 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.43□□□□□ -1.22
CCDC66-221ENST00000487739 GFRA2O00451 464 aa7.42□□□□□ -1.22
CCDC66-221ENST00000487739 C8AP07357 584 aa7.42□□□□□ -1.22
CCDC66-221ENST00000487739 PDIA4P13667 645 aaKnown RBP7.42□□□□□ -1.22
CCDC66-221ENST00000487739 PSMD2Q13200 908 aa7.42□□□□□ -1.22
CCDC66-221ENST00000487739 COX4I2Q96KJ9 171 aa7.42□□□□□ -1.22
CCDC66-221ENST00000487739 LMCD1Q9NZU5 365 aa7.42□□□□□ -1.22
CCDC66-221ENST00000487739 PARP2Q9UGN5 583 aa7.42□□□□□ -1.22
CCDC66-221ENST00000487739 PRR33A8MZF0 331 aa7.41□□□□□ -1.22
CCDC66-221ENST00000487739 ST13P50502 369 aaKnown RBP7.41□□□□□ -1.22
CCDC66-221ENST00000487739 DAB2P98082 770 aa7.41□□□□□ -1.22
CCDC66-221ENST00000487739 DIEXFQ68CQ4 756 aaKnown RBP7.41□□□□□ -1.22
CCDC66-221ENST00000487739 NPAS4Q8IUM7 802 aa7.41□□□□□ -1.22
CCDC66-221ENST00000487739 TMEM40Q8WWA1 233 aa7.41□□□□□ -1.22
CCDC66-221ENST00000487739 HSPA12BQ96MM6 686 aa7.41□□□□□ -1.22
CCDC66-221ENST00000487739 NOC4LQ9BVI4 516 aaKnown RBP7.41□□□□□ -1.22
CCDC66-221ENST00000487739 CAPN6Q9Y6Q1 641 aa7.41□□□□□ -1.22
CCDC66-221ENST00000487739 PGRP06401 933 aa7.4□□□□□ -1.22
CCDC66-221ENST00000487739 TFE3P19532 575 aaPredicted RBP7.4□□□□□ -1.22
CCDC66-221ENST00000487739 CYP7A1P22680 504 aa7.4□□□□□ -1.22
CCDC66-221ENST00000487739 XPCQ01831 940 aaPredicted RBP7.4□□□□□ -1.22
CCDC66-221ENST00000487739 PDE4BQ07343 736 aa7.4□□□□□ -1.22
CCDC66-221ENST00000487739 TAF1CQ15572 869 aaPredicted RBP7.4□□□□□ -1.22
CCDC66-221ENST00000487739 TSNAXIP1Q2TAA8 658 aa7.4□□□□□ -1.22
CCDC66-221ENST00000487739 CDKAL1Q5VV42 579 aa7.4□□□□□ -1.22
CCDC66-221ENST00000487739 XAGE3Q8WTP9 111 aa7.4□□□□□ -1.22
CCDC66-221ENST00000487739 SEMA3GQ9NS98 782 aa7.4□□□□□ -1.22
CCDC66-221ENST00000487739 CNTNAP4Q9C0A0 1308 aa7.39□□□□□ -1.23
CCDC66-221ENST00000487739 H3BS24 57 aa7.39□□□□□ -1.23
CCDC66-221ENST00000487739 KIR3DL1P43629 444 aa7.39□□□□□ -1.23
CCDC66-221ENST00000487739 RPL6Q02878 288 aaKnown RBP7.39□□□□□ -1.23
CCDC66-221ENST00000487739 DNAJC14Q6Y2X3 702 aaPredicted RBP7.39□□□□□ -1.23
CCDC66-221ENST00000487739 THAP5Q7Z6K1 395 aa7.39□□□□□ -1.23
CCDC66-221ENST00000487739 ZSWIM9Q86XI8 627 aa7.39□□□□□ -1.23
CCDC66-221ENST00000487739 MRPL41Q8IXM3 137 aaKnown RBP7.39□□□□□ -1.23
CCDC66-221ENST00000487739 RIN3Q8TB24 985 aa7.39□□□□□ -1.23
CCDC66-221ENST00000487739 CARS2Q9HA77 564 aaKnown RBP7.39□□□□□ -1.23
CCDC66-221ENST00000487739 ATP13A1Q9HD20 1204 aa7.39□□□□□ -1.23
CCDC66-221ENST00000487739 FARP2O94887 1054 aaPredicted RBP7.38□□□□□ -1.23
CCDC66-221ENST00000487739 CBX7O95931 251 aa7.38□□□□□ -1.23
CCDC66-221ENST00000487739 SLC6A19Q695T7 634 aa7.38□□□□□ -1.23
CCDC66-221ENST00000487739 TMC4Q7Z404 712 aa7.38□□□□□ -1.23
CCDC66-221ENST00000487739 TMEM87BQ96K49 555 aa7.38□□□□□ -1.23
CCDC66-221ENST00000487739 TJP2Q9UDY2 1190 aa7.38□□□□□ -1.23
CCDC66-221ENST00000487739 CTNND2Q9UQB3 1225 aa7.38□□□□□ -1.23
CCDC66-221ENST00000487739 ST14Q9Y5Y6 855 aa7.38□□□□□ -1.23
CCDC66-221ENST00000487739 FZD5Q13467 585 aa7.37□□□□□ -1.23
CCDC66-221ENST00000487739 KCNMB1Q16558 191 aa7.37□□□□□ -1.23
CCDC66-221ENST00000487739 ZNF648Q5T619 568 aaPredicted RBP7.37□□□□□ -1.23
CCDC66-221ENST00000487739 JARID2Q92833 1246 aaPredicted RBP7.37□□□□□ -1.23
CCDC66-221ENST00000487739 DPH2Q9BQC3 489 aaPredicted RBP7.37□□□□□ -1.23
CCDC66-221ENST00000487739 ADAM30Q9UKF2 790 aa7.37□□□□□ -1.23
CCDC66-221ENST00000487739 TLR6Q9Y2C9 796 aa7.37□□□□□ -1.23
CCDC66-221ENST00000487739 ETV3P41162 512 aa7.36□□□□□ -1.23
CCDC66-221ENST00000487739 AFMP43652 599 aa7.36□□□□□ -1.23
CCDC66-221ENST00000487739 CDH24Q86UP0 819 aa7.36□□□□□ -1.23
CCDC66-221ENST00000487739 CCDC84Q86UT8 332 aaPredicted RBP7.36□□□□□ -1.23
CCDC66-221ENST00000487739 MCATQ8IVS2 390 aaKnown RBP7.36□□□□□ -1.23
CCDC66-221ENST00000487739 PHC3Q8NDX5 983 aa7.36□□□□□ -1.23
CCDC66-221ENST00000487739 CRELD1Q96HD1 420 aa7.36□□□□□ -1.23
CCDC66-221ENST00000487739 USP31Q70CQ4 1352 aa7.35□□□□□ -1.23
CCDC66-221ENST00000487739 BPNT1O95861 308 aa7.35□□□□□ -1.23
CCDC66-221ENST00000487739 CTSHP09668 335 aa7.35□□□□□ -1.23
CCDC66-221ENST00000487739 JAG1P78504 1218 aa7.35□□□□□ -1.23
CCDC66-221ENST00000487739 FBXO33Q7Z6M2 555 aa7.35□□□□□ -1.23
CCDC66-221ENST00000487739 CCDC120Q96HB5 630 aa7.35□□□□□ -1.23
CCDC66-221ENST00000487739 FAM161BQ96MY7 647 aa7.35□□□□□ -1.23
CCDC66-221ENST00000487739 FAM53CQ9NYF3 392 aa7.35□□□□□ -1.23
CCDC66-221ENST00000487739 SORBS3O60504 671 aa7.34□□□□□ -1.23
CCDC66-221ENST00000487739 ITGAEP38570 1179 aa7.34□□□□□ -1.23
CCDC66-221ENST00000487739 TNK2Q07912 1038 aa7.34□□□□□ -1.23
CCDC66-221ENST00000487739 PKN1Q16512 942 aa7.34□□□□□ -1.23
CCDC66-221ENST00000487739 PIWIL2Q8TC59 973 aaKnown RBP7.34□□□□□ -1.23
CCDC66-221ENST00000487739 UBE2FQ969M7 185 aa7.34□□□□□ -1.23
CCDC66-221ENST00000487739 ACSF2Q96CM8 615 aaPredicted RBP7.34□□□□□ -1.23
CCDC66-221ENST00000487739 MRS2Q9HD23 443 aa7.34□□□□□ -1.23
CCDC66-221ENST00000487739 LRRC10BA6NIK2 292 aa7.33□□□□□ -1.24
CCDC66-221ENST00000487739 LMNB2Q03252 620 aa7.33□□□□□ -1.24
CCDC66-221ENST00000487739 KSR1Q8IVT5 923 aa7.33□□□□□ -1.24
CCDC66-221ENST00000487739 KIRREL1Q96J84 757 aa7.33□□□□□ -1.24
CCDC66-221ENST00000487739 SLC38A3Q99624 504 aa7.33□□□□□ -1.24
CCDC66-221ENST00000487739 ZSWIM5Q9P217 1185 aa7.33□□□□□ -1.24
CCDC66-221ENST00000487739 ZNF503-AS2A6NEH8 195 aa7.32□□□□□ -1.24
CCDC66-221ENST00000487739 CILPO75339 1184 aa7.32□□□□□ -1.24
CCDC66-221ENST00000487739 PLCG1P19174 1290 aa7.32□□□□□ -1.24
CCDC66-221ENST00000487739 ERCC3P19447 782 aa7.32□□□□□ -1.24
CCDC66-221ENST00000487739 GDNFP39905 211 aa7.32□□□□□ -1.24
CCDC66-221ENST00000487739 CAMK2GQ13555 558 aaPredicted RBP7.32□□□□□ -1.24
CCDC66-221ENST00000487739 BNC2Q6ZN30 1099 aaPredicted RBP7.32□□□□□ -1.24
CCDC66-221ENST00000487739 TMPRSS7Q7RTY8 843 aa7.32□□□□□ -1.24
CCDC66-221ENST00000487739 FAM13CQ8NE31 585 aa7.32□□□□□ -1.24
CCDC66-221ENST00000487739 DNAJB8Q8NHS0 232 aa7.32□□□□□ -1.24
CCDC66-221ENST00000487739 CYB5D2Q8WUJ1 264 aa7.32□□□□□ -1.24
CCDC66-221ENST00000487739 ALPK1Q96QP1 1244 aa7.32□□□□□ -1.24
CCDC66-221ENST00000487739 KRTAP4-7Q9BYR0 210 aa7.32□□□□□ -1.24
CCDC66-221ENST00000487739 VTI1BQ9UEU0 232 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms