RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 ZNF280CQ8ND82 737 aa11.2□□□□□ -0.62
LCN2-205ENST00000487719 BRI3BPQ8WY22 251 aa11.2□□□□□ -0.62
LCN2-205ENST00000487719 PARK7Q99497 189 aaKnown RBP11.2□□□□□ -0.62
LCN2-205ENST00000487719 FEZ1Q99689 392 aa11.2□□□□□ -0.62
LCN2-205ENST00000487719 PUS7LQ9H0K6 701 aaKnown RBP11.2□□□□□ -0.62
LCN2-205ENST00000487719 TMOD4Q9NZQ9 345 aa11.2□□□□□ -0.62
LCN2-205ENST00000487719 PNMA3Q9UL41 463 aa11.2□□□□□ -0.62
LCN2-205ENST00000487719 GPR25O00155 361 aa11.19□□□□□ -0.62
LCN2-205ENST00000487719 MPHOSPH10O00566 681 aaKnown RBP11.19□□□□□ -0.62
LCN2-205ENST00000487719 GDF11O95390 407 aa11.19□□□□□ -0.62
LCN2-205ENST00000487719 CRHR2Q13324 411 aa11.19□□□□□ -0.62
LCN2-205ENST00000487719 RAB3GAP1Q15042 981 aa11.19□□□□□ -0.62
LCN2-205ENST00000487719 COL13A1Q5TAT6 717 aaPredicted RBP11.19□□□□□ -0.62
LCN2-205ENST00000487719 ANKRD23Q86SG2 305 aa11.19□□□□□ -0.62
LCN2-205ENST00000487719 PLEKHM2Q8IWE5 1019 aa11.19□□□□□ -0.62
LCN2-205ENST00000487719 PROCA1Q8NCQ7 364 aaPredicted RBP11.19□□□□□ -0.62
LCN2-205ENST00000487719 ERO1AQ96HE7 468 aa11.19□□□□□ -0.62
LCN2-205ENST00000487719 STRBPQ96SI9 672 aaKnown RBP11.19□□□□□ -0.62
LCN2-205ENST00000487719 NAPBQ9H115 298 aa11.19□□□□□ -0.62
LCN2-205ENST00000487719 OSBPL3Q9H4L5 887 aa11.19□□□□□ -0.62
LCN2-205ENST00000487719 HELLSQ9NRZ9 838 aa11.19□□□□□ -0.62
LCN2-205ENST00000487719 DIAPH3Q9NSV4 1193 aa11.19□□□□□ -0.62
LCN2-205ENST00000487719 ZBTB21Q9ULJ3 1066 aa11.19□□□□□ -0.62
LCN2-205ENST00000487719 AFG3L2Q9Y4W6 797 aa11.19□□□□□ -0.62
LCN2-205ENST00000487719 A0A0G2JLL6 359 aaPredicted RBP11.18□□□□□ -0.62
LCN2-205ENST00000487719 C19orf81C9J6K1 198 aa11.18□□□□□ -0.62
LCN2-205ENST00000487719 BTBD19C9JJ37 291 aa11.18□□□□□ -0.62
LCN2-205ENST00000487719 USP17L12C9JPN9 530 aa11.18□□□□□ -0.62
LCN2-205ENST00000487719 USP17L21D6R901 530 aa11.18□□□□□ -0.62
LCN2-205ENST00000487719 PDHXO00330 501 aa11.18□□□□□ -0.62
LCN2-205ENST00000487719 GH2P01242 217 aa11.18□□□□□ -0.62
LCN2-205ENST00000487719 PLCD1P51178 756 aa11.18□□□□□ -0.62
LCN2-205ENST00000487719 USP14P54578 494 aa11.18□□□□□ -0.62
LCN2-205ENST00000487719 SPP2Q13103 211 aa11.18□□□□□ -0.62
LCN2-205ENST00000487719 ZMYM1Q5SVZ6 1142 aa11.18□□□□□ -0.62
LCN2-205ENST00000487719 CENPQQ7L2Z9 268 aaPredicted RBP11.18□□□□□ -0.62
LCN2-205ENST00000487719 PRRT2Q7Z6L0 340 aaPredicted RBP11.18□□□□□ -0.62
LCN2-205ENST00000487719 SMCR8Q8TEV9 937 aaPredicted RBP11.18□□□□□ -0.62
LCN2-205ENST00000487719 OSBP2Q969R2 916 aa11.18□□□□□ -0.62
LCN2-205ENST00000487719 CCDC17Q96LX7 622 aa11.18□□□□□ -0.62
LCN2-205ENST00000487719 SH2D4AQ9H788 454 aa11.18□□□□□ -0.62
LCN2-205ENST00000487719 SLC45A1Q9Y2W3 748 aa11.18□□□□□ -0.62
LCN2-205ENST00000487719 LAMA4Q16363 1823 aa11.18□□□□□ -0.62
LCN2-205ENST00000487719 MINDY4BA8MYZ0 360 aa11.17□□□□□ -0.62
LCN2-205ENST00000487719 PATL2C9JE40 543 aaKnown RBP11.17□□□□□ -0.62
LCN2-205ENST00000487719 USP17L10C9JJH3 530 aa11.17□□□□□ -0.62
LCN2-205ENST00000487719 PRKAB2O43741 272 aa11.17□□□□□ -0.62
LCN2-205ENST00000487719 OSBPP22059 807 aa11.17□□□□□ -0.62
LCN2-205ENST00000487719 SP3Q02447 781 aa11.17□□□□□ -0.62
LCN2-205ENST00000487719 PDE4BQ07343 736 aa11.17□□□□□ -0.62
LCN2-205ENST00000487719 DGKZQ13574 1117 aa11.17□□□□□ -0.62
LCN2-205ENST00000487719 PKN2Q16513 984 aaKnown RBP11.17□□□□□ -0.62
LCN2-205ENST00000487719 SLFNL1Q499Z3 407 aa11.17□□□□□ -0.62
LCN2-205ENST00000487719 MCMDC2Q4G0Z9 681 aa11.17□□□□□ -0.62
LCN2-205ENST00000487719 C12orf60Q5U649 245 aa11.17□□□□□ -0.62
LCN2-205ENST00000487719 TATDN1Q6P1N9 297 aa11.17□□□□□ -0.62
LCN2-205ENST00000487719 TMEM179Q6ZVK1 233 aa11.17□□□□□ -0.62
LCN2-205ENST00000487719 CTU1Q7Z7A3 348 aaKnown RBP11.17□□□□□ -0.62
LCN2-205ENST00000487719 FAM43AQ8N2R8 423 aa11.17□□□□□ -0.62
LCN2-205ENST00000487719 ZNF296Q8WUU4 475 aaPredicted RBP11.17□□□□□ -0.62
LCN2-205ENST00000487719 CCDC136Q96JN2 1154 aa11.17□□□□□ -0.62
LCN2-205ENST00000487719 PTPN18Q99952 460 aa11.17□□□□□ -0.62
LCN2-205ENST00000487719 WDR18Q9BV38 432 aa11.17□□□□□ -0.62
LCN2-205ENST00000487719 DNAJC18Q9H819 358 aa11.17□□□□□ -0.62
LCN2-205ENST00000487719 MKNK2Q9HBH9 465 aa11.17□□□□□ -0.62
LCN2-205ENST00000487719 AGTPBP1Q9UPW5 1226 aa11.17□□□□□ -0.62
LCN2-205ENST00000487719 DOCK3Q8IZD9 2030 aa11.17□□□□□ -0.62
LCN2-205ENST00000487719 M0R2C6 588 aa11.16□□□□□ -0.62
LCN2-205ENST00000487719 TLR2O60603 784 aa11.16□□□□□ -0.62
LCN2-205ENST00000487719 SLURP2P0DP57 97 aa11.16□□□□□ -0.62
LCN2-205ENST00000487719 SHMT1P34896 483 aa11.16□□□□□ -0.62
LCN2-205ENST00000487719 HMGCS2P54868 508 aa11.16□□□□□ -0.62
LCN2-205ENST00000487719 BACE1P56817 501 aa11.16□□□□□ -0.62
LCN2-205ENST00000487719 IRX3P78415 501 aaPredicted RBP11.16□□□□□ -0.62
LCN2-205ENST00000487719 MTMR2Q13614 643 aa11.16□□□□□ -0.62
LCN2-205ENST00000487719 SBK1Q52WX2 424 aa11.16□□□□□ -0.62
LCN2-205ENST00000487719 CTR9Q6PD62 1173 aa11.16□□□□□ -0.62
LCN2-205ENST00000487719 USP17L2Q6R6M4 530 aa11.16□□□□□ -0.62
LCN2-205ENST00000487719 C16orf86Q6ZW13 317 aa11.16□□□□□ -0.62
LCN2-205ENST00000487719 ARHGEF10LQ9HCE6 1279 aa11.16□□□□□ -0.62
LCN2-205ENST00000487719 GSG1L2A8MUP6 293 aa11.15□□□□□ -0.62
LCN2-205ENST00000487719 CHGBP05060 677 aa11.15□□□□□ -0.62
LCN2-205ENST00000487719 CDK8P49336 464 aa11.15□□□□□ -0.62
LCN2-205ENST00000487719 GABPAQ06546 454 aa11.15□□□□□ -0.62
LCN2-205ENST00000487719 PPP4R3BQ5MIZ7 849 aa11.15□□□□□ -0.62
LCN2-205ENST00000487719 TTC22Q5TAA0 569 aa11.15□□□□□ -0.62
LCN2-205ENST00000487719 IFNL3Q8IZI9 196 aa11.15□□□□□ -0.62
LCN2-205ENST00000487719 ZNF444Q8N0Y2 327 aaPredicted RBP11.15□□□□□ -0.62
LCN2-205ENST00000487719 RUFY2Q8WXA3 655 aa11.15□□□□□ -0.62
LCN2-205ENST00000487719 GREB1LQ9C091 1923 aaPredicted RBP11.15□□□□□ -0.62
LCN2-205ENST00000487719 ROBO3Q96MS0 1386 aa11.15□□□□□ -0.63
LCN2-205ENST00000487719 CCDC171Q6TFL3 1326 aa11.14□□□□□ -0.63
LCN2-205ENST00000487719 GNRH1P01148 92 aa11.14□□□□□ -0.63
LCN2-205ENST00000487719 CYP2D6P10635 497 aa11.14□□□□□ -0.63
LCN2-205ENST00000487719 SDSP20132 328 aa11.14□□□□□ -0.63
LCN2-205ENST00000487719 HOXD10P28358 340 aa11.14□□□□□ -0.63
LCN2-205ENST00000487719 GCLCP48506 637 aaPredicted RBP11.14□□□□□ -0.63
LCN2-205ENST00000487719 ICA1Q05084 483 aa11.14□□□□□ -0.63
LCN2-205ENST00000487719 CCDC84Q86UT8 332 aaPredicted RBP11.14□□□□□ -0.63
LCN2-205ENST00000487719 GTF3C2Q8WUA4 911 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms