RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 MB21D2Q8IYB1 491 aaPredicted RBP13.37□□□□□ -0.27
TRA2B-214ENST00000487615 PLCD1P51178 756 aa13.37□□□□□ -0.27
TRA2B-214ENST00000487615 SYCP1Q15431 976 aa13.37□□□□□ -0.27
TRA2B-214ENST00000487615 SYT10Q6XYQ8 523 aa13.37□□□□□ -0.27
TRA2B-214ENST00000487615 KRBA2Q6ZNG9 492 aa13.37□□□□□ -0.27
TRA2B-214ENST00000487615 BAG1Q99933 345 aaPredicted RBP13.37□□□□□ -0.27
TRA2B-214ENST00000487615 GTPBP4Q9BZE4 634 aaKnown RBP13.37□□□□□ -0.27
TRA2B-214ENST00000487615 PARP3Q9Y6F1 533 aa13.37□□□□□ -0.27
TRA2B-214ENST00000487615 WDR19Q8NEZ3 1342 aa13.37□□□□□ -0.27
TRA2B-214ENST00000487615 MYO1BO43795 1136 aa13.37□□□□□ -0.27
TRA2B-214ENST00000487615 DDAH1O94760 285 aa13.37□□□□□ -0.27
TRA2B-214ENST00000487615 LRMPQ12912 555 aa13.37□□□□□ -0.27
TRA2B-214ENST00000487615 TDRD12Q587J7 1177 aaKnown RBP13.37□□□□□ -0.27
TRA2B-214ENST00000487615 PDLIM2Q96JY6 352 aa13.37□□□□□ -0.27
TRA2B-214ENST00000487615 PLIN2Q99541 437 aa13.37□□□□□ -0.27
TRA2B-214ENST00000487615 FOXP1Q9H334 677 aaPredicted RBP13.37□□□□□ -0.27
TRA2B-214ENST00000487615 CSF1RP07333 972 aa13.37□□□□□ -0.27
TRA2B-214ENST00000487615 TBC1D10CQ8IV04 446 aa13.37□□□□□ -0.27
TRA2B-214ENST00000487615 PGBD1Q96JS3 809 aa13.37□□□□□ -0.27
TRA2B-214ENST00000487615 LZTS2Q9BRK4 669 aa13.37□□□□□ -0.27
TRA2B-214ENST00000487615 SRRTQ9BXP5 876 aaKnown RBP13.37□□□□□ -0.27
TRA2B-214ENST00000487615 AIFM3Q96NN9 605 aa13.36□□□□□ -0.27
TRA2B-214ENST00000487615 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.36□□□□□ -0.27
TRA2B-214ENST00000487615 AKAP12Q02952 1782 aa13.36□□□□□ -0.27
TRA2B-214ENST00000487615 SYNRGQ9UMZ2 1314 aa13.36□□□□□ -0.27
TRA2B-214ENST00000487615 RIOK3O14730 519 aaKnown RBP13.36□□□□□ -0.27
TRA2B-214ENST00000487615 ARID4AP29374 1257 aaPredicted RBP13.36□□□□□ -0.27
TRA2B-214ENST00000487615 DYNLL1P63167 89 aaKnown RBP13.36□□□□□ -0.27
TRA2B-214ENST00000487615 TNIP1Q15025 636 aa13.36□□□□□ -0.27
TRA2B-214ENST00000487615 BSDC1Q9NW68 430 aaPredicted RBP13.36□□□□□ -0.27
TRA2B-214ENST00000487615 NRXN3Q9Y4C0 1643 aa13.36□□□□□ -0.27
TRA2B-214ENST00000487615 BICDL2A1A5D9 508 aa13.36□□□□□ -0.27
TRA2B-214ENST00000487615 EXOSC10Q01780 885 aaKnown RBP13.36□□□□□ -0.27
TRA2B-214ENST00000487615 JAKMIP3Q5VZ66 844 aa13.36□□□□□ -0.27
TRA2B-214ENST00000487615 C11orf57Q6ZUT1 292 aaPredicted RBP13.36□□□□□ -0.27
TRA2B-214ENST00000487615 CNGA4Q8IV77 575 aa13.36□□□□□ -0.27
TRA2B-214ENST00000487615 PNMA1Q8ND90 353 aa13.36□□□□□ -0.27
TRA2B-214ENST00000487615 ERMNQ8TAM6 284 aa13.36□□□□□ -0.27
TRA2B-214ENST00000487615 TAF6LQ9Y6J9 622 aa13.36□□□□□ -0.27
TRA2B-214ENST00000487615 MFSD14BQ5SR56 506 aa13.35□□□□□ -0.27
TRA2B-214ENST00000487615 KCNB2Q92953 911 aa13.35□□□□□ -0.27
TRA2B-214ENST00000487615 EHMT1Q9H9B1 1298 aa13.35□□□□□ -0.27
TRA2B-214ENST00000487615 AKR1B15C9JRZ8 316 aaPredicted RBP13.35□□□□□ -0.27
TRA2B-214ENST00000487615 SCG2P13521 617 aa13.35□□□□□ -0.27
TRA2B-214ENST00000487615 TRAF1Q13077 416 aa13.35□□□□□ -0.27
TRA2B-214ENST00000487615 TIGD1Q96MW7 591 aa13.35□□□□□ -0.27
TRA2B-214ENST00000487615 CYLC1P35663 651 aaPredicted RBP13.35□□□□□ -0.27
TRA2B-214ENST00000487615 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.35□□□□□ -0.27
TRA2B-214ENST00000487615 CTNND2Q9UQB3 1225 aa13.35□□□□□ -0.27
TRA2B-214ENST00000487615 V9GYY5 206 aaPredicted RBP13.35□□□□□ -0.27
TRA2B-214ENST00000487615 CCDC66A2RUB6 948 aa13.35□□□□□ -0.27
TRA2B-214ENST00000487615 UBXN1Q04323 297 aa13.35□□□□□ -0.27
TRA2B-214ENST00000487615 NONOQ15233 471 aaKnown RBP eCLIP13.35□□□□□ -0.27
TRA2B-214ENST00000487615 DPCR1Q3MIW9 517 aa13.34□□□□□ -0.27
TRA2B-214ENST00000487615 KRT25Q7Z3Z0 450 aa13.34□□□□□ -0.27
TRA2B-214ENST00000487615 TRMT44Q8IYL2 757 aaKnown RBP13.34□□□□□ -0.27
TRA2B-214ENST00000487615 IGSF22Q8N9C0 903 aa13.34□□□□□ -0.27
TRA2B-214ENST00000487615 FEZ1Q99689 392 aa13.34□□□□□ -0.27
TRA2B-214ENST00000487615 LEMD3Q9Y2U8 911 aa13.34□□□□□ -0.27
TRA2B-214ENST00000487615 COL15A1P39059 1388 aa13.34□□□□□ -0.27
TRA2B-214ENST00000487615 DLG5Q8TDM6 1919 aa13.34□□□□□ -0.27
TRA2B-214ENST00000487615 MMP1P03956 469 aa13.34□□□□□ -0.27
TRA2B-214ENST00000487615 CCT6AP40227 531 aaKnown RBP13.34□□□□□ -0.27
TRA2B-214ENST00000487615 ALX1Q15699 326 aa13.34□□□□□ -0.27
TRA2B-214ENST00000487615 ZSWIM4Q9H7M6 989 aa13.34□□□□□ -0.27
TRA2B-214ENST00000487615 GJB4Q9NTQ9 266 aa13.34□□□□□ -0.27
TRA2B-214ENST00000487615 PCDHA5Q9Y5H7 936 aa13.34□□□□□ -0.27
TRA2B-214ENST00000487615 ATP2B4P23634 1241 aa13.34□□□□□ -0.27
TRA2B-214ENST00000487615 MRPL12P52815 198 aaKnown RBP13.34□□□□□ -0.27
TRA2B-214ENST00000487615 TRIML1Q8N9V2 468 aa13.34□□□□□ -0.27
TRA2B-214ENST00000487615 EHBP1Q8NDI1 1231 aa13.34□□□□□ -0.27
TRA2B-214ENST00000487615 STAMQ92783 540 aa13.34□□□□□ -0.27
TRA2B-214ENST00000487615 GPCPD1Q9NPB8 672 aa13.34□□□□□ -0.27
TRA2B-214ENST00000487615 AKR1B10O60218 316 aa13.33□□□□□ -0.27
TRA2B-214ENST00000487615 STAG1Q8WVM7 1258 aa13.33□□□□□ -0.27
TRA2B-214ENST00000487615 XDHP47989 1333 aa13.33□□□□□ -0.28
TRA2B-214ENST00000487615 EIF6P56537 245 aaKnown RBP13.33□□□□□ -0.28
TRA2B-214ENST00000487615 CYB5R4Q7L1T6 521 aa13.33□□□□□ -0.28
TRA2B-214ENST00000487615 LRRC8AQ8IWT6 810 aa13.33□□□□□ -0.28
TRA2B-214ENST00000487615 BLIDQ8IZY5 108 aa13.33□□□□□ -0.28
TRA2B-214ENST00000487615 TAF4BQ92750 862 aa13.33□□□□□ -0.28
TRA2B-214ENST00000487615 PYCARDQ9ULZ3 195 aa13.33□□□□□ -0.28
TRA2B-214ENST00000487615 A0A087WWV3 80 aa13.33□□□□□ -0.28
TRA2B-214ENST00000487615 POTEB2H3BUK9 544 aa13.33□□□□□ -0.28
TRA2B-214ENST00000487615 ARHGAP6O43182 974 aa13.33□□□□□ -0.28
TRA2B-214ENST00000487615 PAK1Q13153 545 aa13.33□□□□□ -0.28
TRA2B-214ENST00000487615 ENOX2Q16206 610 aaKnown RBP13.33□□□□□ -0.28
TRA2B-214ENST00000487615 AXDND1Q5T1B0 1012 aaPredicted RBP13.33□□□□□ -0.28
TRA2B-214ENST00000487615 VPS36Q86VN1 386 aa13.33□□□□□ -0.28
TRA2B-214ENST00000487615 NEDD4P46934 1319 aa13.33□□□□□ -0.28
TRA2B-214ENST00000487615 SPDYE4A6NLX3 237 aa13.33□□□□□ -0.28
TRA2B-214ENST00000487615 CCNT1O60563 726 aaKnown RBP13.33□□□□□ -0.28
TRA2B-214ENST00000487615 PPP1R2P41236 205 aa13.33□□□□□ -0.28
TRA2B-214ENST00000487615 BMS1Q14692 1282 aaKnown RBP13.33□□□□□ -0.28
TRA2B-214ENST00000487615 KARSQ15046 597 aaKnown RBP13.33□□□□□ -0.28
TRA2B-214ENST00000487615 TCERG1LQ5VWI1 586 aa13.33□□□□□ -0.28
TRA2B-214ENST00000487615 DPP8Q6V1X1 898 aaPredicted RBP13.33□□□□□ -0.28
TRA2B-214ENST00000487615 OGFOD1Q8N543 542 aa13.33□□□□□ -0.28
TRA2B-214ENST00000487615 SRP68Q9UHB9 627 aaKnown RBP13.33□□□□□ -0.28
TRA2B-214ENST00000487615 NRBP1Q9UHY1 535 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms