RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 C16orf86Q6ZW13 317 aa23.34■■□□□ 1.33
SEC22A-208ENST00000487572 RAD50Q92878 1312 aa23.33■■□□□ 1.33
SEC22A-208ENST00000487572 MPHOSPH10O00566 681 aaKnown RBP23.33■■□□□ 1.33
SEC22A-208ENST00000487572 IRF6O14896 467 aa23.33■■□□□ 1.33
SEC22A-208ENST00000487572 PPARAQ07869 468 aa23.33■■□□□ 1.33
SEC22A-208ENST00000487572 ZBTB21Q9ULJ3 1066 aa23.33■■□□□ 1.33
SEC22A-208ENST00000487572 LAMB1P07942 1786 aa23.32■■□□□ 1.32
SEC22A-208ENST00000487572 GH2P01242 217 aa23.32■■□□□ 1.32
SEC22A-208ENST00000487572 FGAP02671 866 aa23.32■■□□□ 1.32
SEC22A-208ENST00000487572 ASNSP08243 561 aa23.32■■□□□ 1.32
SEC22A-208ENST00000487572 ALX1Q15699 326 aa23.32■■□□□ 1.32
SEC22A-208ENST00000487572 ABCB5Q2M3G0 1257 aa23.32■■□□□ 1.32
SEC22A-208ENST00000487572 ATAD5Q96QE3 1844 aa23.31■■□□□ 1.32
SEC22A-208ENST00000487572 ROBO3Q96MS0 1386 aa23.31■■□□□ 1.32
SEC22A-208ENST00000487572 MANSC4A6NHS7 340 aaPredicted RBP23.31■■□□□ 1.32
SEC22A-208ENST00000487572 GTF2A2P52657 109 aa23.31■■□□□ 1.32
SEC22A-208ENST00000487572 MAP2K1Q02750 393 aaPredicted RBP23.31■■□□□ 1.32
SEC22A-208ENST00000487572 SREBF2Q12772 1141 aa23.31■■□□□ 1.32
SEC22A-208ENST00000487572 TRIM75PA6NK02 468 aa23.3■■□□□ 1.32
SEC22A-208ENST00000487572 USP17L5A8MUK1 530 aa23.3■■□□□ 1.32
SEC22A-208ENST00000487572 SGSM2O43147 1006 aa23.3■■□□□ 1.32
SEC22A-208ENST00000487572 CDC45O75419 566 aa23.3■■□□□ 1.32
SEC22A-208ENST00000487572 SLC3A2P08195 630 aaKnown RBP23.3■■□□□ 1.32
SEC22A-208ENST00000487572 CTDSPL2Q05D32 466 aa23.3■■□□□ 1.32
SEC22A-208ENST00000487572 SNAPC2Q13487 334 aa23.3■■□□□ 1.32
SEC22A-208ENST00000487572 RAB3GAP1Q15042 981 aa23.3■■□□□ 1.32
SEC22A-208ENST00000487572 MKNK2Q9HBH9 465 aa23.3■■□□□ 1.32
SEC22A-208ENST00000487572 CABP5Q9NP86 173 aa23.3■■□□□ 1.32
SEC22A-208ENST00000487572 TAOK2Q9UL54 1235 aa23.3■■□□□ 1.32
SEC22A-208ENST00000487572 CCL15-CCL14A0A0B4J2E2 113 aa23.29■■□□□ 1.32
SEC22A-208ENST00000487572 PRDM1O75626 825 aa23.29■■□□□ 1.32
SEC22A-208ENST00000487572 HAND2P61296 217 aa23.29■■□□□ 1.32
SEC22A-208ENST00000487572 CCL15Q16663 113 aa23.29■■□□□ 1.32
SEC22A-208ENST00000487572 MS4A4AQ96JQ5 239 aa23.29■■□□□ 1.32
SEC22A-208ENST00000487572 DSCC1Q9BVC3 393 aa23.29■■□□□ 1.32
SEC22A-208ENST00000487572 AFG3L2Q9Y4W6 797 aa23.29■■□□□ 1.32
SEC22A-208ENST00000487572 ZMYM6O95789 1325 aa23.29■■□□□ 1.32
SEC22A-208ENST00000487572 AKR1B1P15121 316 aa23.28■■□□□ 1.32
SEC22A-208ENST00000487572 CASC1Q6TDU7 716 aa23.28■■□□□ 1.32
SEC22A-208ENST00000487572 REM2Q8IYK8 340 aaPredicted RBP23.28■■□□□ 1.32
SEC22A-208ENST00000487572 ESYT1Q9BSJ8 1104 aa23.28■■□□□ 1.32
SEC22A-208ENST00000487572 BEGAINQ9BUH8 593 aa23.28■■□□□ 1.32
SEC22A-208ENST00000487572 AS3MTQ9HBK9 375 aa23.28■■□□□ 1.32
SEC22A-208ENST00000487572 GINM1Q9NU53 330 aa23.28■■□□□ 1.32
SEC22A-208ENST00000487572 KCNH4Q9UQ05 1017 aa23.28■■□□□ 1.32
SEC22A-208ENST00000487572 CETPP11597 493 aa23.27■■□□□ 1.32
SEC22A-208ENST00000487572 TM4SF4P48230 202 aa23.27■■□□□ 1.32
SEC22A-208ENST00000487572 PDE4BQ07343 736 aa23.27■■□□□ 1.32
SEC22A-208ENST00000487572 SPP2Q13103 211 aa23.27■■□□□ 1.32
SEC22A-208ENST00000487572 SEPT2Q15019 361 aa23.27■■□□□ 1.32
SEC22A-208ENST00000487572 ZNF280CQ8ND82 737 aa23.27■■□□□ 1.32
SEC22A-208ENST00000487572 BRI3BPQ8WY22 251 aa23.27■■□□□ 1.32
SEC22A-208ENST00000487572 ZNF287Q9HBT7 754 aa23.27■■□□□ 1.32
SEC22A-208ENST00000487572 WBP1LQ9NX94 342 aa23.27■■□□□ 1.32
SEC22A-208ENST00000487572 CXCL11O14625 94 aa23.26■■□□□ 1.31
SEC22A-208ENST00000487572 RASA1P20936 1047 aa23.26■■□□□ 1.31
SEC22A-208ENST00000487572 INHBEP58166 350 aa23.26■■□□□ 1.31
SEC22A-208ENST00000487572 PTH1RQ03431 593 aa23.26■■□□□ 1.31
SEC22A-208ENST00000487572 CCDC17Q96LX7 622 aa23.26■■□□□ 1.31
SEC22A-208ENST00000487572 INCENPQ9NQS7 918 aa23.26■■□□□ 1.31
SEC22A-208ENST00000487572 MYH8P13535 1937 aa23.25■■□□□ 1.31
SEC22A-208ENST00000487572 IGF2BP3O00425 579 aaKnown RBP eCLIP23.25■■□□□ 1.31
SEC22A-208ENST00000487572 HSPA1AP0DMV8 641 aaKnown RBP23.25■■□□□ 1.31
SEC22A-208ENST00000487572 HSPA1BP0DMV9 641 aaKnown RBP23.25■■□□□ 1.31
SEC22A-208ENST00000487572 GUCY1A2P33402 732 aa23.25■■□□□ 1.31
SEC22A-208ENST00000487572 KIAA1211Q6ZU35 1233 aa23.25■■□□□ 1.31
SEC22A-208ENST00000487572 TMEM179Q6ZVK1 233 aa23.25■■□□□ 1.31
SEC22A-208ENST00000487572 IFNL1Q8IU54 200 aa23.25■■□□□ 1.31
SEC22A-208ENST00000487572 TBC1D2Q9BYX2 928 aa23.25■■□□□ 1.31
SEC22A-208ENST00000487572 ANAPC4Q9UJX5 808 aa23.25■■□□□ 1.31
SEC22A-208ENST00000487572 PHIPQ8WWQ0 1821 aa23.24■■□□□ 1.31
SEC22A-208ENST00000487572 TESPA1A2RU30 521 aaPredicted RBP23.24■■□□□ 1.31
SEC22A-208ENST00000487572 ZNF213O14771 459 aa23.24■■□□□ 1.31
SEC22A-208ENST00000487572 GADL1Q6ZQY3 521 aa23.24■■□□□ 1.31
SEC22A-208ENST00000487572 CLEC10AQ8IUN9 316 aa23.24■■□□□ 1.31
SEC22A-208ENST00000487572 ZNF444Q8N0Y2 327 aaPredicted RBP23.24■■□□□ 1.31
SEC22A-208ENST00000487572 PTPN18Q99952 460 aa23.24■■□□□ 1.31
SEC22A-208ENST00000487572 WDR18Q9BV38 432 aa23.24■■□□□ 1.31
SEC22A-208ENST00000487572 TOMM22Q9NS69 142 aa23.24■■□□□ 1.31
SEC22A-208ENST00000487572 RNF186Q9NXI6 227 aa23.24■■□□□ 1.31
SEC22A-208ENST00000487572 CTNNA3Q9UI47 895 aa23.24■■□□□ 1.31
SEC22A-208ENST00000487572 A0A0G2JLL6 359 aaPredicted RBP23.23■■□□□ 1.31
SEC22A-208ENST00000487572 TRPA1O75762 1119 aa23.23■■□□□ 1.31
SEC22A-208ENST00000487572 MTMR2Q13614 643 aa23.23■■□□□ 1.31
SEC22A-208ENST00000487572 PRRT2Q7Z6L0 340 aaPredicted RBP23.23■■□□□ 1.31
SEC22A-208ENST00000487572 TBC1D10CQ8IV04 446 aa23.23■■□□□ 1.31
SEC22A-208ENST00000487572 NBPF3Q9H094 633 aa23.23■■□□□ 1.31
SEC22A-208ENST00000487572 TSKSQ9UJT2 592 aa23.23■■□□□ 1.31
SEC22A-208ENST00000487572 GTF3C3Q9Y5Q9 886 aa23.23■■□□□ 1.31
SEC22A-208ENST00000487572 TACC3Q9Y6A5 838 aa23.23■■□□□ 1.31
SEC22A-208ENST00000487572 HMGCS2P54868 508 aa23.22■■□□□ 1.31
SEC22A-208ENST00000487572 DGKZQ13574 1117 aa23.22■■□□□ 1.31
SEC22A-208ENST00000487572 IMMTQ16891 758 aaKnown RBP23.22■■□□□ 1.31
SEC22A-208ENST00000487572 FAM47AQ5JRC9 791 aa23.22■■□□□ 1.31
SEC22A-208ENST00000487572 RRP12Q5JTH9 1297 aaKnown RBP23.22■■□□□ 1.31
SEC22A-208ENST00000487572 OTUD7BQ6GQQ9 843 aa23.22■■□□□ 1.31
SEC22A-208ENST00000487572 FEZ1Q99689 392 aa23.22■■□□□ 1.31
SEC22A-208ENST00000487572 ANO2Q9NQ90 1003 aa23.22■■□□□ 1.31
SEC22A-208ENST00000487572 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.22■■□□□ 1.31
SEC22A-208ENST00000487572 BTBD19C9JJ37 291 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms