RNA–Protein interactions for RNA: ENST00000487447.1

CLIP2-207, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-207ENST00000487447 CCDC171Q6TFL3 1326 aa13.96□□□□□ -0.17
CLIP2-207ENST00000487447 RAD50Q92878 1312 aa13.96□□□□□ -0.17
CLIP2-207ENST00000487447 POLR3DP05423 398 aaPredicted RBP13.96□□□□□ -0.17
CLIP2-207ENST00000487447 CYP2D6P10635 497 aa13.96□□□□□ -0.17
CLIP2-207ENST00000487447 PTPRAP18433 802 aa13.96□□□□□ -0.17
CLIP2-207ENST00000487447 RGS19P49795 217 aa13.96□□□□□ -0.17
CLIP2-207ENST00000487447 JAG1P78504 1218 aa13.96□□□□□ -0.17
CLIP2-207ENST00000487447 ALX1Q15699 326 aa13.96□□□□□ -0.17
CLIP2-207ENST00000487447 BMP2KLQ5H9B9 411 aa13.96□□□□□ -0.17
CLIP2-207ENST00000487447 CCDC129Q6ZRS4 1044 aa13.96□□□□□ -0.17
CLIP2-207ENST00000487447 C16orf86Q6ZW13 317 aa13.96□□□□□ -0.17
CLIP2-207ENST00000487447 ZNF589Q86UQ0 364 aaPredicted RBP13.96□□□□□ -0.17
CLIP2-207ENST00000487447 CRACR2BQ8N4Y2 399 aaPredicted RBP13.96□□□□□ -0.17
CLIP2-207ENST00000487447 TBC1D2Q9BYX2 928 aa13.96□□□□□ -0.17
CLIP2-207ENST00000487447 SWAP70Q9UH65 585 aa13.96□□□□□ -0.17
CLIP2-207ENST00000487447 ASNSP08243 561 aa13.95□□□□□ -0.18
CLIP2-207ENST00000487447 SREBF2Q12772 1141 aa13.95□□□□□ -0.18
CLIP2-207ENST00000487447 VPS53Q5VIR6 699 aa13.95□□□□□ -0.18
CLIP2-207ENST00000487447 SKAP1Q86WV1 359 aa13.95□□□□□ -0.18
CLIP2-207ENST00000487447 OTUD5Q96G74 571 aa13.95□□□□□ -0.18
CLIP2-207ENST00000487447 CFHR5Q9BXR6 569 aa13.95□□□□□ -0.18
CLIP2-207ENST00000487447 DIAPH3Q9NSV4 1193 aa13.95□□□□□ -0.18
CLIP2-207ENST00000487447 RNF186Q9NXI6 227 aa13.95□□□□□ -0.18
CLIP2-207ENST00000487447 SAGE1Q9NXZ1 904 aa13.95□□□□□ -0.18
CLIP2-207ENST00000487447 CYP2D7A0A087X1C5 515 aa13.94□□□□□ -0.18
CLIP2-207ENST00000487447 SMIM22K7EJ46 135 aa13.94□□□□□ -0.18
CLIP2-207ENST00000487447 CXCL11O14625 94 aa13.94□□□□□ -0.18
CLIP2-207ENST00000487447 IRF6O14896 467 aa13.94□□□□□ -0.18
CLIP2-207ENST00000487447 CHMLP26374 656 aa13.94□□□□□ -0.18
CLIP2-207ENST00000487447 GTF2A2P52657 109 aa13.94□□□□□ -0.18
CLIP2-207ENST00000487447 MFAP1P55081 439 aaKnown RBP13.94□□□□□ -0.18
CLIP2-207ENST00000487447 MOGSQ13724 837 aa13.94□□□□□ -0.18
CLIP2-207ENST00000487447 SLC4A8Q2Y0W8 1093 aa13.94□□□□□ -0.18
CLIP2-207ENST00000487447 AMOTL1Q8IY63 956 aa13.94□□□□□ -0.18
CLIP2-207ENST00000487447 WDR18Q9BV38 432 aa13.94□□□□□ -0.18
CLIP2-207ENST00000487447 TRIM34Q9BYJ4 488 aa13.94□□□□□ -0.18
CLIP2-207ENST00000487447 NACAP1Q9BZK3 213 aa13.94□□□□□ -0.18
CLIP2-207ENST00000487447 PICK1Q9NRD5 415 aa13.94□□□□□ -0.18
CLIP2-207ENST00000487447 ANAPC4Q9UJX5 808 aa13.94□□□□□ -0.18
CLIP2-207ENST00000487447 ZBTB21Q9ULJ3 1066 aa13.94□□□□□ -0.18
CLIP2-207ENST00000487447 AFG3L2Q9Y4W6 797 aa13.94□□□□□ -0.18
CLIP2-207ENST00000487447 HSPD1P10809 573 aaKnown RBP13.93□□□□□ -0.18
CLIP2-207ENST00000487447 TDO2P48775 406 aa13.93□□□□□ -0.18
CLIP2-207ENST00000487447 CWC27Q6UX04 472 aaKnown RBP13.93□□□□□ -0.18
CLIP2-207ENST00000487447 BRI3BPQ8WY22 251 aa13.93□□□□□ -0.18
CLIP2-207ENST00000487447 NAPBQ9H115 298 aa13.93□□□□□ -0.18
CLIP2-207ENST00000487447 IL25Q9H293 177 aa13.93□□□□□ -0.18
CLIP2-207ENST00000487447 ZCCHC17Q9NP64 241 aaKnown RBP13.93□□□□□ -0.18
CLIP2-207ENST00000487447 A0A0G2JLL6 359 aaPredicted RBP13.92□□□□□ -0.18
CLIP2-207ENST00000487447 USP17L5A8MUK1 530 aa13.92□□□□□ -0.18
CLIP2-207ENST00000487447 IGF2BP3O00425 579 aaKnown RBP eCLIP13.92□□□□□ -0.18
CLIP2-207ENST00000487447 CDK8P49336 464 aa13.92□□□□□ -0.18
CLIP2-207ENST00000487447 MKRN3Q13064 507 aaKnown RBP13.92□□□□□ -0.18
CLIP2-207ENST00000487447 SNAPC2Q13487 334 aa13.92□□□□□ -0.18
CLIP2-207ENST00000487447 SHROOM1Q2M3G4 852 aaPredicted RBP13.92□□□□□ -0.18
CLIP2-207ENST00000487447 CERKLQ49MI3 558 aaPredicted RBP13.92□□□□□ -0.18
CLIP2-207ENST00000487447 PRRT2Q7Z6L0 340 aaPredicted RBP13.92□□□□□ -0.18
CLIP2-207ENST00000487447 IFNL1Q8IU54 200 aa13.92□□□□□ -0.18
CLIP2-207ENST00000487447 SLC44A5Q8NCS7 719 aa13.92□□□□□ -0.18
CLIP2-207ENST00000487447 DYNLL2Q96FJ2 89 aa13.92□□□□□ -0.18
CLIP2-207ENST00000487447 PTPN18Q99952 460 aa13.92□□□□□ -0.18
CLIP2-207ENST00000487447 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.92□□□□□ -0.18
CLIP2-207ENST00000487447 ZHX2Q9Y6X8 837 aa13.92□□□□□ -0.18
CLIP2-207ENST00000487447 PLIN4Q96Q06 1357 aa13.92□□□□□ -0.18
CLIP2-207ENST00000487447 CCL15-CCL14A0A0B4J2E2 113 aa13.91□□□□□ -0.18
CLIP2-207ENST00000487447 GDF11O95390 407 aa13.91□□□□□ -0.18
CLIP2-207ENST00000487447 GH2P01242 217 aa13.91□□□□□ -0.18
CLIP2-207ENST00000487447 APPP05067 770 aa13.91□□□□□ -0.18
CLIP2-207ENST00000487447 FGRP09769 529 aa13.91□□□□□ -0.18
CLIP2-207ENST00000487447 CETPP11597 493 aa13.91□□□□□ -0.18
CLIP2-207ENST00000487447 GUCY1A2P33402 732 aa13.91□□□□□ -0.18
CLIP2-207ENST00000487447 CCL15Q16663 113 aa13.91□□□□□ -0.18
CLIP2-207ENST00000487447 ABCB5Q2M3G0 1257 aa13.91□□□□□ -0.18
CLIP2-207ENST00000487447 NOM1Q5C9Z4 860 aaKnown RBP13.91□□□□□ -0.18
CLIP2-207ENST00000487447 SH3D19Q5HYK7 790 aa13.91□□□□□ -0.18
CLIP2-207ENST00000487447 ZNF280CQ8ND82 737 aa13.91□□□□□ -0.18
CLIP2-207ENST00000487447 CCDC17Q96LX7 622 aa13.91□□□□□ -0.18
CLIP2-207ENST00000487447 DSCC1Q9BVC3 393 aa13.91□□□□□ -0.18
CLIP2-207ENST00000487447 AS3MTQ9HBK9 375 aa13.91□□□□□ -0.18
CLIP2-207ENST00000487447 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.91□□□□□ -0.18
CLIP2-207ENST00000487447 SGSM2O43147 1006 aa13.9□□□□□ -0.18
CLIP2-207ENST00000487447 ALDH1A1P00352 501 aa13.9□□□□□ -0.18
CLIP2-207ENST00000487447 FGAP02671 866 aa13.9□□□□□ -0.18
CLIP2-207ENST00000487447 RASA1P20936 1047 aa13.9□□□□□ -0.18
CLIP2-207ENST00000487447 PPARAQ07869 468 aa13.9□□□□□ -0.18
CLIP2-207ENST00000487447 TMEM179Q6ZVK1 233 aa13.9□□□□□ -0.18
CLIP2-207ENST00000487447 CCDC84Q86UT8 332 aaPredicted RBP13.9□□□□□ -0.18
CLIP2-207ENST00000487447 RUFY2Q8WXA3 655 aa13.9□□□□□ -0.18
CLIP2-207ENST00000487447 MINDY4BA8MYZ0 360 aa13.89□□□□□ -0.19
CLIP2-207ENST00000487447 AKR1B1P15121 316 aa13.89□□□□□ -0.19
CLIP2-207ENST00000487447 ANKRD23Q86SG2 305 aa13.89□□□□□ -0.19
CLIP2-207ENST00000487447 C12orf42Q96LP6 360 aa13.89□□□□□ -0.19
CLIP2-207ENST00000487447 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.89□□□□□ -0.19
CLIP2-207ENST00000487447 ZNF287Q9HBT7 754 aa13.89□□□□□ -0.19
CLIP2-207ENST00000487447 SLC45A1Q9Y2W3 748 aa13.89□□□□□ -0.19
CLIP2-207ENST00000487447 PARP14Q460N5 1801 aa13.88□□□□□ -0.19
CLIP2-207ENST00000487447 IGKV6D-41A0A0C4DH26 115 aa13.88□□□□□ -0.19
CLIP2-207ENST00000487447 BTBD19C9JJ37 291 aa13.88□□□□□ -0.19
CLIP2-207ENST00000487447 SOX10P56693 466 aa13.88□□□□□ -0.19
CLIP2-207ENST00000487447 BACE1P56817 501 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms