RNA–Protein interactions for RNA: ENST00000487275.1

ZNF541-204, Transcript of zinc finger protein 541, humanhuman

TSL 3

Gene ZNF541, Length 579 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-204ENST00000487275 ENAHQ8N8S7 591 aaPredicted RBP9.4□□□□□ -0.9
ZNF541-204ENST00000487275 FAM184AQ8NB25 1140 aa9.4□□□□□ -0.9
ZNF541-204ENST00000487275 EHD4Q9H223 541 aa9.4□□□□□ -0.9
ZNF541-204ENST00000487275 VEZTQ9HBM0 779 aa9.4□□□□□ -0.9
ZNF541-204ENST00000487275 SENP2Q9HC62 589 aa9.4□□□□□ -0.9
ZNF541-204ENST00000487275 NCOA5Q9HCD5 579 aaKnown RBP9.4□□□□□ -0.9
ZNF541-204ENST00000487275 RNF181Q9P0P0 153 aa9.4□□□□□ -0.9
ZNF541-204ENST00000487275 PI4KBQ9UBF8 816 aa9.4□□□□□ -0.9
ZNF541-204ENST00000487275 KIF3AQ9Y496 699 aa9.4□□□□□ -0.9
ZNF541-204ENST00000487275 FOCADQ5VW36 1801 aa9.4□□□□□ -0.91
ZNF541-204ENST00000487275 MYH1P12882 1939 aa9.39□□□□□ -0.91
ZNF541-204ENST00000487275 CDK5RAP2Q96SN8 1893 aa9.39□□□□□ -0.91
ZNF541-204ENST00000487275 PTPDC1A2A3K4 754 aa9.39□□□□□ -0.91
ZNF541-204ENST00000487275 H7C1D1 291 aa9.39□□□□□ -0.91
ZNF541-204ENST00000487275 CDKL5O76039 1030 aa9.39□□□□□ -0.91
ZNF541-204ENST00000487275 PDIA4P13667 645 aaKnown RBP9.39□□□□□ -0.91
ZNF541-204ENST00000487275 PDCP20941 246 aa9.39□□□□□ -0.91
ZNF541-204ENST00000487275 RCAN1P53805 252 aa9.39□□□□□ -0.91
ZNF541-204ENST00000487275 GABPAQ06546 454 aa9.39□□□□□ -0.91
ZNF541-204ENST00000487275 GPR162Q16538 588 aa9.39□□□□□ -0.91
ZNF541-204ENST00000487275 RBM26Q5T8P6 1007 aaKnown RBP9.39□□□□□ -0.91
ZNF541-204ENST00000487275 ZNF654Q8IZM8 581 aa9.39□□□□□ -0.91
ZNF541-204ENST00000487275 NSUN7Q8NE18 718 aaKnown RBP9.39□□□□□ -0.91
ZNF541-204ENST00000487275 NUP133Q8WUM0 1156 aa9.39□□□□□ -0.91
ZNF541-204ENST00000487275 MYL10Q9BUA6 226 aa9.39□□□□□ -0.91
ZNF541-204ENST00000487275 TCP11L1Q9NUJ3 509 aa9.39□□□□□ -0.91
ZNF541-204ENST00000487275 CNOT7Q9UIV1 285 aaKnown RBP9.39□□□□□ -0.91
ZNF541-204ENST00000487275 TAOK2Q9UL54 1235 aa9.39□□□□□ -0.91
ZNF541-204ENST00000487275 HPS5Q9UPZ3 1129 aa9.39□□□□□ -0.91
ZNF541-204ENST00000487275 WDR33Q9C0J8 1336 aaKnown RBP9.38□□□□□ -0.91
ZNF541-204ENST00000487275 CCDC196A0A1B0GTZ2 297 aa9.38□□□□□ -0.91
ZNF541-204ENST00000487275 SHTN1A0MZ66 631 aa9.38□□□□□ -0.91
ZNF541-204ENST00000487275 DDTLA6NHG4 134 aaPredicted RBP9.38□□□□□ -0.91
ZNF541-204ENST00000487275 WNT10BO00744 389 aa9.38□□□□□ -0.91
ZNF541-204ENST00000487275 NMT2O60551 498 aa9.38□□□□□ -0.91
ZNF541-204ENST00000487275 JAK2O60674 1132 aa9.38□□□□□ -0.91
ZNF541-204ENST00000487275 DDAH1O94760 285 aa9.38□□□□□ -0.91
ZNF541-204ENST00000487275 CALM1P0DP23 149 aa9.38□□□□□ -0.91
ZNF541-204ENST00000487275 CALM2P0DP24 149 aa9.38□□□□□ -0.91
ZNF541-204ENST00000487275 CALM3P0DP25 149 aa9.38□□□□□ -0.91
ZNF541-204ENST00000487275 RXRAP19793 462 aa9.38□□□□□ -0.91
ZNF541-204ENST00000487275 TNNI2P48788 182 aa9.38□□□□□ -0.91
ZNF541-204ENST00000487275 RTN1Q16799 776 aa9.38□□□□□ -0.91
ZNF541-204ENST00000487275 KIF4BQ2VIQ3 1234 aa9.38□□□□□ -0.91
ZNF541-204ENST00000487275 FKBP1CQ5VVH2 108 aa9.38□□□□□ -0.91
ZNF541-204ENST00000487275 LARP1BQ659C4 914 aaKnown RBP9.38□□□□□ -0.91
ZNF541-204ENST00000487275 SH3BP5LQ7L8J4 393 aa9.38□□□□□ -0.91
ZNF541-204ENST00000487275 DGKHQ86XP1 1220 aa9.38□□□□□ -0.91
ZNF541-204ENST00000487275 FOXP4Q8IVH2 680 aaPredicted RBP9.38□□□□□ -0.91
ZNF541-204ENST00000487275 CCDC144CPQ8IYA2 1237 aa9.38□□□□□ -0.91
ZNF541-204ENST00000487275 GPC2Q8N158 579 aa9.38□□□□□ -0.91
ZNF541-204ENST00000487275 NEDD1Q8NHV4 660 aa9.38□□□□□ -0.91
ZNF541-204ENST00000487275 SMARCC2Q8TAQ2 1214 aa9.38□□□□□ -0.91
ZNF541-204ENST00000487275 FAM151AQ8WW52 585 aa9.38□□□□□ -0.91
ZNF541-204ENST00000487275 TNPO1Q92973 898 aaKnown RBP9.38□□□□□ -0.91
ZNF541-204ENST00000487275 DDX11Q96FC9 970 aa9.38□□□□□ -0.91
ZNF541-204ENST00000487275 ZBED3Q96IU2 234 aaPredicted RBP9.38□□□□□ -0.91
ZNF541-204ENST00000487275 CCDC17Q96LX7 622 aa9.38□□□□□ -0.91
ZNF541-204ENST00000487275 KAT14Q9H8E8 782 aa9.38□□□□□ -0.91
ZNF541-204ENST00000487275 COL2A1P02458 1487 aaPredicted RBP9.38□□□□□ -0.91
ZNF541-204ENST00000487275 ECM29Q5VYK3 1845 aa9.38□□□□□ -0.91
ZNF541-204ENST00000487275 NID2Q14112 1375 aa9.37□□□□□ -0.91
ZNF541-204ENST00000487275 ATRNL1Q5VV63 1379 aa9.37□□□□□ -0.91
ZNF541-204ENST00000487275 VPS37CA5D8V6 355 aaPredicted RBP9.37□□□□□ -0.91
ZNF541-204ENST00000487275 STX6O43752 255 aa9.37□□□□□ -0.91
ZNF541-204ENST00000487275 DTNBO60941 627 aa9.37□□□□□ -0.91
ZNF541-204ENST00000487275 CTDNEP1O95476 244 aa9.37□□□□□ -0.91
ZNF541-204ENST00000487275 BRD1O95696 1058 aa9.37□□□□□ -0.91
ZNF541-204ENST00000487275 AKR1B1P15121 316 aa9.37□□□□□ -0.91
ZNF541-204ENST00000487275 SYT1P21579 422 aa9.37□□□□□ -0.91
ZNF541-204ENST00000487275 SHMT1P34896 483 aa9.37□□□□□ -0.91
ZNF541-204ENST00000487275 ADD1P35611 737 aaKnown RBP9.37□□□□□ -0.91
ZNF541-204ENST00000487275 TNFAIP1Q13829 316 aa9.37□□□□□ -0.91
ZNF541-204ENST00000487275 PKP1Q13835 747 aa9.37□□□□□ -0.91
ZNF541-204ENST00000487275 PPP2R5BQ15173 497 aa9.37□□□□□ -0.91
ZNF541-204ENST00000487275 NBPF9Q3BBW0 867 aa9.37□□□□□ -0.91
ZNF541-204ENST00000487275 TBC1D10BQ4KMP7 808 aaPredicted RBP9.37□□□□□ -0.91
ZNF541-204ENST00000487275 PPP4R3BQ5MIZ7 849 aa9.37□□□□□ -0.91
ZNF541-204ENST00000487275 FOXD4L5Q5VV16 416 aaPredicted RBP9.37□□□□□ -0.91
ZNF541-204ENST00000487275 C9orf131Q5VYM1 1079 aa9.37□□□□□ -0.91
ZNF541-204ENST00000487275 SAMD7Q7Z3H4 446 aa9.37□□□□□ -0.91
ZNF541-204ENST00000487275 FAM83AQ86UY5 434 aa9.37□□□□□ -0.91
ZNF541-204ENST00000487275 FOXD4L4Q8WXT5 416 aaPredicted RBP9.37□□□□□ -0.91
ZNF541-204ENST00000487275 ANKS1AQ92625 1134 aa9.37□□□□□ -0.91
ZNF541-204ENST00000487275 GBP4Q96PP9 640 aa9.37□□□□□ -0.91
ZNF541-204ENST00000487275 CSRNP1Q96S65 589 aa9.37□□□□□ -0.91
ZNF541-204ENST00000487275 IL17RBQ9NRM6 502 aa9.37□□□□□ -0.91
ZNF541-204ENST00000487275 RBM28Q9NW13 759 aaKnown RBP9.37□□□□□ -0.91
ZNF541-204ENST00000487275 STX8Q9UNK0 236 aa9.37□□□□□ -0.91
ZNF541-204ENST00000487275 PLIN4Q96Q06 1357 aa9.37□□□□□ -0.91
ZNF541-204ENST00000487275 H3BQV1 296 aa9.36□□□□□ -0.91
ZNF541-204ENST00000487275 MPHOSPH10O00566 681 aaKnown RBP9.36□□□□□ -0.91
ZNF541-204ENST00000487275 GRIN3BO60391 1043 aa9.36□□□□□ -0.91
ZNF541-204ENST00000487275 LMOD1P29536 600 aaPredicted RBP9.36□□□□□ -0.91
ZNF541-204ENST00000487275 CDC27P30260 824 aa9.36□□□□□ -0.91
ZNF541-204ENST00000487275 SSRP1Q08945 709 aaKnown RBP9.36□□□□□ -0.91
ZNF541-204ENST00000487275 CERKLQ49MI3 558 aaPredicted RBP9.36□□□□□ -0.91
ZNF541-204ENST00000487275 IFFO2Q5TF58 517 aa9.36□□□□□ -0.91
ZNF541-204ENST00000487275 RCSD1Q6JBY9 416 aa9.36□□□□□ -0.91
ZNF541-204ENST00000487275 FANCBQ8NB91 859 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms