RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 USP32Q8NFA0 1604 aa8.52□□□□□ -1.05
RTFDC1-209ENST00000487211 OIP5O43482 229 aa8.52□□□□□ -1.05
RTFDC1-209ENST00000487211 TMF1P82094 1093 aa8.52□□□□□ -1.05
RTFDC1-209ENST00000487211 MAP3K10Q02779 954 aa8.52□□□□□ -1.05
RTFDC1-209ENST00000487211 PCDH1Q08174 1060 aa8.52□□□□□ -1.05
RTFDC1-209ENST00000487211 MAP3K11Q16584 847 aa8.52□□□□□ -1.05
RTFDC1-209ENST00000487211 KANK3Q6NY19 840 aa8.52□□□□□ -1.05
RTFDC1-209ENST00000487211 C20orf204Q6ZNR8 217 aa8.52□□□□□ -1.05
RTFDC1-209ENST00000487211 CHSY3Q70JA7 882 aa8.52□□□□□ -1.05
RTFDC1-209ENST00000487211 ERMP1Q7Z2K6 904 aa8.52□□□□□ -1.05
RTFDC1-209ENST00000487211 VN1R5Q7Z5H4 357 aa8.52□□□□□ -1.05
RTFDC1-209ENST00000487211 TRIM56Q9BRZ2 755 aaKnown RBP8.52□□□□□ -1.05
RTFDC1-209ENST00000487211 COPRSQ9NQ92 184 aa8.52□□□□□ -1.05
RTFDC1-209ENST00000487211 SEC31BQ9NQW1 1179 aa8.52□□□□□ -1.05
RTFDC1-209ENST00000487211 TNS2Q63HR2 1409 aa8.52□□□□□ -1.05
RTFDC1-209ENST00000487211 ATP7BP35670 1465 aa8.51□□□□□ -1.05
RTFDC1-209ENST00000487211 RGPD8O14715 1765 aaPredicted RBP8.51□□□□□ -1.05
RTFDC1-209ENST00000487211 M0R082 166 aa8.51□□□□□ -1.05
RTFDC1-209ENST00000487211 WFS1O76024 890 aa8.51□□□□□ -1.05
RTFDC1-209ENST00000487211 CELA3AP09093 270 aa8.51□□□□□ -1.05
RTFDC1-209ENST00000487211 SLURP2P0DP57 97 aa8.51□□□□□ -1.05
RTFDC1-209ENST00000487211 BCRP11274 1271 aa8.51□□□□□ -1.05
RTFDC1-209ENST00000487211 AMPD1P23109 780 aa8.51□□□□□ -1.05
RTFDC1-209ENST00000487211 CDC25BP30305 580 aa8.51□□□□□ -1.05
RTFDC1-209ENST00000487211 CABP4P57796 275 aa8.51□□□□□ -1.05
RTFDC1-209ENST00000487211 R3HDM1Q15032 1099 aaKnown RBP8.51□□□□□ -1.05
RTFDC1-209ENST00000487211 LCE2CQ5TA81 110 aa8.51□□□□□ -1.05
RTFDC1-209ENST00000487211 RELL1Q8IUW5 271 aa8.51□□□□□ -1.05
RTFDC1-209ENST00000487211 CACTIN-AS1Q8N1I8 211 aa8.51□□□□□ -1.05
RTFDC1-209ENST00000487211 IL22RA1Q8N6P7 574 aa8.51□□□□□ -1.05
RTFDC1-209ENST00000487211 ZNF417Q8TAU3 575 aa8.51□□□□□ -1.05
RTFDC1-209ENST00000487211 BTBD6Q96KE9 485 aa8.51□□□□□ -1.05
RTFDC1-209ENST00000487211 NECAB3Q96P71 396 aaPredicted RBP8.51□□□□□ -1.05
RTFDC1-209ENST00000487211 ZNF587Q96SQ5 575 aaPredicted RBP8.51□□□□□ -1.05
RTFDC1-209ENST00000487211 SPATA31A3Q5VYP0 1347 aa8.51□□□□□ -1.05
RTFDC1-209ENST00000487211 QRICH2Q9H0J4 1663 aa8.5□□□□□ -1.05
RTFDC1-209ENST00000487211 F6X3S4 739 aa8.5□□□□□ -1.05
RTFDC1-209ENST00000487211 LILRB5O75023 590 aa8.5□□□□□ -1.05
RTFDC1-209ENST00000487211 EPHA1P21709 976 aa8.5□□□□□ -1.05
RTFDC1-209ENST00000487211 AFF1P51825 1210 aaKnown RBP8.5□□□□□ -1.05
RTFDC1-209ENST00000487211 RACK1P63244 317 aaKnown RBP8.5□□□□□ -1.05
RTFDC1-209ENST00000487211 GRIK5Q16478 980 aa8.5□□□□□ -1.05
RTFDC1-209ENST00000487211 ZNF423Q2M1K9 1284 aa8.5□□□□□ -1.05
RTFDC1-209ENST00000487211 PPIP5K1Q6PFW1 1433 aa8.5□□□□□ -1.05
RTFDC1-209ENST00000487211 LYPD4Q6UWN0 246 aa8.5□□□□□ -1.05
RTFDC1-209ENST00000487211 C8orf86Q6ZUL3 223 aa8.5□□□□□ -1.05
RTFDC1-209ENST00000487211 ZNF654Q8IZM8 581 aa8.5□□□□□ -1.05
RTFDC1-209ENST00000487211 C8orf37Q96NL8 207 aa8.5□□□□□ -1.05
RTFDC1-209ENST00000487211 RSRP1Q9BUV0 290 aa8.5□□□□□ -1.05
RTFDC1-209ENST00000487211 ACBD3Q9H3P7 528 aa8.5□□□□□ -1.05
RTFDC1-209ENST00000487211 TMEM39AQ9NV64 488 aa8.5□□□□□ -1.05
RTFDC1-209ENST00000487211 KBTBD4Q9NVX7 518 aa8.5□□□□□ -1.05
RTFDC1-209ENST00000487211 DDX41Q9UJV9 622 aaKnown RBP8.5□□□□□ -1.05
RTFDC1-209ENST00000487211 PXDNQ92626 1479 aa8.5□□□□□ -1.05
RTFDC1-209ENST00000487211 POLR3AO14802 1390 aaPredicted RBP8.49□□□□□ -1.05
RTFDC1-209ENST00000487211 SHISA8B8ZZ34 492 aa8.49□□□□□ -1.05
RTFDC1-209ENST00000487211 ENC1O14682 589 aa8.49□□□□□ -1.05
RTFDC1-209ENST00000487211 CELA2BP08218 269 aaPredicted RBP8.49□□□□□ -1.05
RTFDC1-209ENST00000487211 RLBP1P12271 317 aa8.49□□□□□ -1.05
RTFDC1-209ENST00000487211 PPP2R3AQ06190 1150 aa8.49□□□□□ -1.05
RTFDC1-209ENST00000487211 PWP1Q13610 501 aa8.49□□□□□ -1.05
RTFDC1-209ENST00000487211 IKBKEQ14164 716 aa8.49□□□□□ -1.05
RTFDC1-209ENST00000487211 NAALADL2Q58DX5 795 aa8.49□□□□□ -1.05
RTFDC1-209ENST00000487211 SRA1Q9HD15 236 aaKnown RBP8.49□□□□□ -1.05
RTFDC1-209ENST00000487211 PNPLA6Q8IY17 1366 aa8.48□□□□□ -1.05
RTFDC1-209ENST00000487211 NINLQ9Y2I6 1382 aa8.48□□□□□ -1.05
RTFDC1-209ENST00000487211 MINDY4BA8MYZ0 360 aa8.48□□□□□ -1.05
RTFDC1-209ENST00000487211 H3BRJ5 948 aa8.48□□□□□ -1.05
RTFDC1-209ENST00000487211 B3GALT4O96024 378 aa8.48□□□□□ -1.05
RTFDC1-209ENST00000487211 ESRRAP11474 423 aaPredicted RBP8.48□□□□□ -1.05
RTFDC1-209ENST00000487211 GBP2P32456 591 aaPredicted RBP8.48□□□□□ -1.05
RTFDC1-209ENST00000487211 ZNF775Q96BV0 537 aaPredicted RBP8.48□□□□□ -1.05
RTFDC1-209ENST00000487211 CAPN10Q9HC96 672 aa8.48□□□□□ -1.05
RTFDC1-209ENST00000487211 PPME1Q9Y570 386 aa8.48□□□□□ -1.05
RTFDC1-209ENST00000487211 SBNO1A3KN83 1393 aa8.48□□□□□ -1.05
RTFDC1-209ENST00000487211 ATRNO75882 1429 aa8.47□□□□□ -1.05
RTFDC1-209ENST00000487211 CPSF1Q10570 1443 aaKnown RBP8.47□□□□□ -1.05
RTFDC1-209ENST00000487211 LINC01387J3KSC0 135 aa8.47□□□□□ -1.05
RTFDC1-209ENST00000487211 PAGE1O75459 146 aa8.47□□□□□ -1.05
RTFDC1-209ENST00000487211 HSPA6P17066 643 aa8.47□□□□□ -1.05
RTFDC1-209ENST00000487211 LIG3P49916 1009 aa8.47□□□□□ -1.05
RTFDC1-209ENST00000487211 NUTM2GQ5VZR2 741 aa8.47□□□□□ -1.05
RTFDC1-209ENST00000487211 TTBK2Q6IQ55 1244 aa8.47□□□□□ -1.05
RTFDC1-209ENST00000487211 TXNDC11Q6PKC3 985 aa8.47□□□□□ -1.05
RTFDC1-209ENST00000487211 WFDC8Q8IUA0 241 aa8.47□□□□□ -1.05
RTFDC1-209ENST00000487211 WHAMMQ8TF30 809 aa8.47□□□□□ -1.05
RTFDC1-209ENST00000487211 LRRC4BQ9NT99 713 aa8.47□□□□□ -1.05
RTFDC1-209ENST00000487211 CD163L1Q9NR16 1453 aa8.46□□□□□ -1.05
RTFDC1-209ENST00000487211 SOX1O00570 391 aaPredicted RBP8.46□□□□□ -1.06
RTFDC1-209ENST00000487211 ZEB1P37275 1124 aaPredicted RBP8.46□□□□□ -1.06
RTFDC1-209ENST00000487211 BAG6P46379 1132 aa8.46□□□□□ -1.06
RTFDC1-209ENST00000487211 TNNI2P48788 182 aa8.46□□□□□ -1.06
RTFDC1-209ENST00000487211 FAM117BQ6P1L5 589 aa8.46□□□□□ -1.06
RTFDC1-209ENST00000487211 SLC7A3Q8WY07 619 aa8.46□□□□□ -1.06
RTFDC1-209ENST00000487211 TMEM74Q96NL1 305 aa8.46□□□□□ -1.06
RTFDC1-209ENST00000487211 POLR3GLQ9BT43 218 aa8.46□□□□□ -1.06
RTFDC1-209ENST00000487211 INPP5FQ9Y2H2 1132 aa8.46□□□□□ -1.06
RTFDC1-209ENST00000487211 TTC21BQ7Z4L5 1316 aa8.46□□□□□ -1.06
RTFDC1-209ENST00000487211 SSH2Q76I76 1423 aa8.46□□□□□ -1.06
RTFDC1-209ENST00000487211 PCNX4Q63HM2 1172 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms