RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 GPHNQ9NQX3 736 aaPredicted RBP8.24□□□□□ -1.09
SF3A3-206ENST00000487062 MKRN1Q9UHC7 482 aaKnown RBP8.24□□□□□ -1.09
SF3A3-206ENST00000487062 BRPF3Q9ULD4 1205 aa8.24□□□□□ -1.09
SF3A3-206ENST00000487062 MTMR6Q9Y217 621 aa8.24□□□□□ -1.09
SF3A3-206ENST00000487062 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.24□□□□□ -1.09
SF3A3-206ENST00000487062 CD2APQ9Y5K6 639 aa8.24□□□□□ -1.09
SF3A3-206ENST00000487062 SLC12A7Q9Y666 1083 aa8.24□□□□□ -1.09
SF3A3-206ENST00000487062 TACC3Q9Y6A5 838 aa8.24□□□□□ -1.09
SF3A3-206ENST00000487062 TCHHQ07283 1943 aa8.24□□□□□ -1.09
SF3A3-206ENST00000487062 MYH15Q9Y2K3 1946 aa8.24□□□□□ -1.09
SF3A3-206ENST00000487062 MYO3BQ8WXR4 1341 aa8.24□□□□□ -1.09
SF3A3-206ENST00000487062 MYH6P13533 1939 aa8.23□□□□□ -1.09
SF3A3-206ENST00000487062 CCDC196A0A1B0GTZ2 297 aa8.23□□□□□ -1.09
SF3A3-206ENST00000487062 TSPY2A6NKD2 308 aa8.23□□□□□ -1.09
SF3A3-206ENST00000487062 JAK2O60674 1132 aa8.23□□□□□ -1.09
SF3A3-206ENST00000487062 CALM1P0DP23 149 aa8.23□□□□□ -1.09
SF3A3-206ENST00000487062 CALM2P0DP24 149 aa8.23□□□□□ -1.09
SF3A3-206ENST00000487062 CALM3P0DP25 149 aa8.23□□□□□ -1.09
SF3A3-206ENST00000487062 RHBDL3P58872 404 aa8.23□□□□□ -1.09
SF3A3-206ENST00000487062 IFIT1BQ5T764 474 aaKnown RBP8.23□□□□□ -1.09
SF3A3-206ENST00000487062 TTC6Q86TZ1 520 aa8.23□□□□□ -1.09
SF3A3-206ENST00000487062 MAPKAPK5Q8IW41 473 aa8.23□□□□□ -1.09
SF3A3-206ENST00000487062 ZNF444Q8N0Y2 327 aaPredicted RBP8.23□□□□□ -1.09
SF3A3-206ENST00000487062 LARGE2Q8N3Y3 721 aa8.23□□□□□ -1.09
SF3A3-206ENST00000487062 RGS22Q8NE09 1264 aa8.23□□□□□ -1.09
SF3A3-206ENST00000487062 DDX11Q96FC9 970 aa8.23□□□□□ -1.09
SF3A3-206ENST00000487062 ZSCAN10Q96SZ4 725 aaPredicted RBP8.23□□□□□ -1.09
SF3A3-206ENST00000487062 ZKSCAN3Q9BRR0 538 aa8.23□□□□□ -1.09
SF3A3-206ENST00000487062 CRISPLD2Q9H0B8 497 aa8.23□□□□□ -1.09
SF3A3-206ENST00000487062 TSPYL2Q9H2G4 693 aaPredicted RBP8.23□□□□□ -1.09
SF3A3-206ENST00000487062 KDM4CQ9H3R0 1056 aa8.23□□□□□ -1.09
SF3A3-206ENST00000487062 MKNK2Q9HBH9 465 aa8.23□□□□□ -1.09
SF3A3-206ENST00000487062 USP40Q9NVE5 1235 aa8.23□□□□□ -1.09
SF3A3-206ENST00000487062 HPS5Q9UPZ3 1129 aa8.23□□□□□ -1.09
SF3A3-206ENST00000487062 TNKSO95271 1327 aa8.23□□□□□ -1.09
SF3A3-206ENST00000487062 FLT1P17948 1338 aa8.23□□□□□ -1.09
SF3A3-206ENST00000487062 NID2Q14112 1375 aa8.22□□□□□ -1.09
SF3A3-206ENST00000487062 ADAMTSL1Q8N6G6 1762 aa8.22□□□□□ -1.09
SF3A3-206ENST00000487062 ARFGEF1Q9Y6D6 1849 aa8.22□□□□□ -1.09
SF3A3-206ENST00000487062 TRAK2O60296 914 aa8.22□□□□□ -1.09
SF3A3-206ENST00000487062 PRDM1O75626 825 aa8.22□□□□□ -1.09
SF3A3-206ENST00000487062 CTDNEP1O95476 244 aa8.22□□□□□ -1.09
SF3A3-206ENST00000487062 CYP2D6P10635 497 aa8.22□□□□□ -1.09
SF3A3-206ENST00000487062 NCLP19338 710 aaKnown RBP8.22□□□□□ -1.09
SF3A3-206ENST00000487062 CRKP46108 304 aa8.22□□□□□ -1.09
SF3A3-206ENST00000487062 SCNN1DP51172 638 aa8.22□□□□□ -1.09
SF3A3-206ENST00000487062 RBM5P52756 815 aaKnown RBP eCLIP8.22□□□□□ -1.09
SF3A3-206ENST00000487062 SEC23AQ15436 765 aa8.22□□□□□ -1.09
SF3A3-206ENST00000487062 RTN1Q16799 776 aa8.22□□□□□ -1.09
SF3A3-206ENST00000487062 CATIPQ7Z7H3 387 aa8.22□□□□□ -1.09
SF3A3-206ENST00000487062 MICU3Q86XE3 530 aa8.22□□□□□ -1.09
SF3A3-206ENST00000487062 KIAA0825Q8IV33 1275 aa8.22□□□□□ -1.09
SF3A3-206ENST00000487062 NIM1KQ8IY84 436 aa8.22□□□□□ -1.09
SF3A3-206ENST00000487062 ZNF654Q8IZM8 581 aa8.22□□□□□ -1.09
SF3A3-206ENST00000487062 EFCAB3Q8N7B9 438 aa8.22□□□□□ -1.09
SF3A3-206ENST00000487062 ZDHHC15Q96MV8 337 aa8.22□□□□□ -1.09
SF3A3-206ENST00000487062 MXD3Q9BW11 206 aa8.22□□□□□ -1.09
SF3A3-206ENST00000487062 ZSCAN16Q9H4T2 348 aaPredicted RBP8.22□□□□□ -1.09
SF3A3-206ENST00000487062 ORC3Q9UBD5 711 aaPredicted RBP8.22□□□□□ -1.09
SF3A3-206ENST00000487062 PPP1R1BQ9UD71 204 aaPredicted RBP8.22□□□□□ -1.09
SF3A3-206ENST00000487062 SAP30BPQ9UHR5 308 aaKnown RBP8.22□□□□□ -1.09
SF3A3-206ENST00000487062 SERPINA10Q9UK55 444 aa8.22□□□□□ -1.09
SF3A3-206ENST00000487062 HDAC9Q9UKV0 1011 aa8.22□□□□□ -1.09
SF3A3-206ENST00000487062 DDAH1O94760 285 aa8.21□□□□□ -1.1
SF3A3-206ENST00000487062 HLA-DOAP06340 250 aa8.21□□□□□ -1.1
SF3A3-206ENST00000487062 TSPY3P0CV98 308 aa8.21□□□□□ -1.1
SF3A3-206ENST00000487062 TSPY8P0CW00 308 aa8.21□□□□□ -1.1
SF3A3-206ENST00000487062 IARSP41252 1262 aaKnown RBP8.21□□□□□ -1.1
SF3A3-206ENST00000487062 TFAP4Q01664 338 aa8.21□□□□□ -1.1
SF3A3-206ENST00000487062 SSRP1Q08945 709 aaKnown RBP8.21□□□□□ -1.1
SF3A3-206ENST00000487062 CDC42EP5Q6NZY7 148 aa8.21□□□□□ -1.1
SF3A3-206ENST00000487062 C16orf86Q6ZW13 317 aa8.21□□□□□ -1.1
SF3A3-206ENST00000487062 TRIM22Q8IYM9 498 aa8.21□□□□□ -1.1
SF3A3-206ENST00000487062 ENAHQ8N8S7 591 aaPredicted RBP8.21□□□□□ -1.1
SF3A3-206ENST00000487062 NKX2-3Q8TAU0 364 aa8.21□□□□□ -1.1
SF3A3-206ENST00000487062 WASF1Q92558 559 aa8.21□□□□□ -1.1
SF3A3-206ENST00000487062 DYNLL2Q96FJ2 89 aa8.21□□□□□ -1.1
SF3A3-206ENST00000487062 KCNQ5Q9NR82 932 aa8.21□□□□□ -1.1
SF3A3-206ENST00000487062 TCP11L1Q9NUJ3 509 aa8.21□□□□□ -1.1
SF3A3-206ENST00000487062 RBM28Q9NW13 759 aaKnown RBP8.21□□□□□ -1.1
SF3A3-206ENST00000487062 ZNRF3Q9ULT6 936 aa8.21□□□□□ -1.1
SF3A3-206ENST00000487062 DDX49Q9Y6V7 483 aaKnown RBP8.21□□□□□ -1.1
SF3A3-206ENST00000487062 STK36Q9NRP7 1315 aa8.21□□□□□ -1.1
SF3A3-206ENST00000487062 PSDA5PKW4 1024 aaPredicted RBP8.2□□□□□ -1.1
SF3A3-206ENST00000487062 YDJCA8MPS7 323 aa8.2□□□□□ -1.1
SF3A3-206ENST00000487062 SMIM22K7EJ46 135 aa8.2□□□□□ -1.1
SF3A3-206ENST00000487062 PRPF40AO75400 957 aaKnown RBP8.2□□□□□ -1.1
SF3A3-206ENST00000487062 MBD3O95983 291 aa8.2□□□□□ -1.1
SF3A3-206ENST00000487062 IFNAR1P17181 557 aa8.2□□□□□ -1.1
SF3A3-206ENST00000487062 ADD1P35611 737 aaKnown RBP8.2□□□□□ -1.1
SF3A3-206ENST00000487062 CDK8P49336 464 aa8.2□□□□□ -1.1
SF3A3-206ENST00000487062 MMP14P50281 582 aa8.2□□□□□ -1.1
SF3A3-206ENST00000487062 PLCD1P51178 756 aa8.2□□□□□ -1.1
SF3A3-206ENST00000487062 KRT85P78386 507 aa8.2□□□□□ -1.1
SF3A3-206ENST00000487062 AKAP17AQ02040 695 aaKnown RBP8.2□□□□□ -1.1
SF3A3-206ENST00000487062 PICALMQ13492 652 aa8.2□□□□□ -1.1
SF3A3-206ENST00000487062 TRIM29Q14134 588 aa8.2□□□□□ -1.1
SF3A3-206ENST00000487062 SLC4A8Q2Y0W8 1093 aa8.2□□□□□ -1.1
SF3A3-206ENST00000487062 FAM47AQ5JRC9 791 aa8.2□□□□□ -1.1
SF3A3-206ENST00000487062 APOBEC3HQ6NTF7 200 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms