RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 MYLIPQ8WY64 445 aa9.49□□□□□ -0.89
PDPN-205ENST00000487038 LPAR1Q92633 364 aa9.49□□□□□ -0.89
PDPN-205ENST00000487038 SEMA6BQ9H3T3 888 aa9.49□□□□□ -0.89
PDPN-205ENST00000487038 GPR75-ASB3A0A0A6YYF3 556 aa9.48□□□□□ -0.89
PDPN-205ENST00000487038 TNFRSF10AO00220 468 aa9.48□□□□□ -0.89
PDPN-205ENST00000487038 LDHCP07864 332 aa9.48□□□□□ -0.89
PDPN-205ENST00000487038 SLURP2P0DP57 97 aa9.48□□□□□ -0.89
PDPN-205ENST00000487038 CNGA1P29973 690 aa9.48□□□□□ -0.89
PDPN-205ENST00000487038 IL15P40933 162 aaPredicted RBP9.48□□□□□ -0.89
PDPN-205ENST00000487038 ATN1P54259 1190 aaPredicted RBP9.48□□□□□ -0.89
PDPN-205ENST00000487038 RTP1P59025 263 aa9.48□□□□□ -0.89
PDPN-205ENST00000487038 MAP2K5Q13163 448 aa9.48□□□□□ -0.89
PDPN-205ENST00000487038 CCDC102BQ68D86 513 aa9.48□□□□□ -0.89
PDPN-205ENST00000487038 ATG9AQ7Z3C6 839 aa9.48□□□□□ -0.89
PDPN-205ENST00000487038 NOL10Q9BSC4 688 aaKnown RBP9.48□□□□□ -0.89
PDPN-205ENST00000487038 PAGR1Q9BTK6 254 aa9.48□□□□□ -0.89
PDPN-205ENST00000487038 WDR18Q9BV38 432 aa9.48□□□□□ -0.89
PDPN-205ENST00000487038 TRIM34Q9BYJ4 488 aa9.48□□□□□ -0.89
PDPN-205ENST00000487038 SIL1Q9H173 461 aa9.48□□□□□ -0.89
PDPN-205ENST00000487038 PRDM5Q9NQX1 630 aaPredicted RBP9.48□□□□□ -0.89
PDPN-205ENST00000487038 DDX20Q9UHI6 824 aaKnown RBP9.48□□□□□ -0.89
PDPN-205ENST00000487038 ATP11BQ9Y2G3 1177 aa9.48□□□□□ -0.89
PDPN-205ENST00000487038 SALL2Q9Y467 1007 aaPredicted RBP9.48□□□□□ -0.89
PDPN-205ENST00000487038 MYH8P13535 1937 aa9.48□□□□□ -0.89
PDPN-205ENST00000487038 USP17L10C9JJH3 530 aa9.47□□□□□ -0.89
PDPN-205ENST00000487038 KBTBD13C9JR72 458 aa9.47□□□□□ -0.89
PDPN-205ENST00000487038 RFX5P48382 616 aaPredicted RBP9.47□□□□□ -0.89
PDPN-205ENST00000487038 RHBDL3P58872 404 aa9.47□□□□□ -0.89
PDPN-205ENST00000487038 RASGRF1Q13972 1273 aa9.47□□□□□ -0.89
PDPN-205ENST00000487038 SHHQ15465 462 aa9.47□□□□□ -0.89
PDPN-205ENST00000487038 CCL14Q16627 93 aa9.47□□□□□ -0.89
PDPN-205ENST00000487038 MORN1Q5T089 497 aa9.47□□□□□ -0.89
PDPN-205ENST00000487038 USP6NLQ92738 828 aa9.47□□□□□ -0.89
PDPN-205ENST00000487038 EDC3Q96F86 508 aaKnown RBP9.47□□□□□ -0.89
PDPN-205ENST00000487038 P2RX7Q99572 595 aaKnown RBP9.47□□□□□ -0.89
PDPN-205ENST00000487038 DHX36Q9H2U1 1008 aaKnown RBP9.47□□□□□ -0.89
PDPN-205ENST00000487038 GINM1Q9NU53 330 aa9.47□□□□□ -0.89
PDPN-205ENST00000487038 IVNS1ABPQ9Y6Y0 642 aa9.47□□□□□ -0.89
PDPN-205ENST00000487038 A0A0G2JMZ2 1700 aa9.47□□□□□ -0.89
PDPN-205ENST00000487038 PLXNA1Q9UIW2 1896 aa9.47□□□□□ -0.89
PDPN-205ENST00000487038 MECOMQ03112 1051 aa9.46□□□□□ -0.9
PDPN-205ENST00000487038 MVPQ14764 893 aaKnown RBP9.46□□□□□ -0.9
PDPN-205ENST00000487038 WDR78Q5VTH9 848 aa9.46□□□□□ -0.9
PDPN-205ENST00000487038 CRACR2BQ8N4Y2 399 aaPredicted RBP9.46□□□□□ -0.9
PDPN-205ENST00000487038 ARRDC4Q8NCT1 418 aa9.46□□□□□ -0.9
PDPN-205ENST00000487038 PORCNQ9H237 461 aa9.46□□□□□ -0.9
PDPN-205ENST00000487038 TXNRD2Q9NNW7 524 aa9.46□□□□□ -0.9
PDPN-205ENST00000487038 PI4KBQ9UBF8 816 aa9.46□□□□□ -0.9
PDPN-205ENST00000487038 RBPJLQ9UBG7 517 aa9.46□□□□□ -0.9
PDPN-205ENST00000487038 HDAC5Q9UQL6 1122 aa9.46□□□□□ -0.9
PDPN-205ENST00000487038 MYO5AQ9Y4I1 1855 aaKnown RBP9.45□□□□□ -0.9
PDPN-205ENST00000487038 UBTFL1P0CB47 393 aaPredicted RBP9.45□□□□□ -0.9
PDPN-205ENST00000487038 ATP2B2Q01814 1243 aa9.45□□□□□ -0.9
PDPN-205ENST00000487038 C9orf50Q5SZB4 431 aa9.45□□□□□ -0.9
PDPN-205ENST00000487038 TEX11Q8IYF3 940 aa9.45□□□□□ -0.9
PDPN-205ENST00000487038 USP44Q9H0E7 712 aa9.45□□□□□ -0.9
PDPN-205ENST00000487038 TTYH1Q9H313 450 aaPredicted RBP9.45□□□□□ -0.9
PDPN-205ENST00000487038 AKAP2Q9Y2D5 859 aa9.45□□□□□ -0.9
PDPN-205ENST00000487038 RABGAP1Q9Y3P9 1069 aa9.45□□□□□ -0.9
PDPN-205ENST00000487038 NAV1Q8NEY1 1877 aa9.45□□□□□ -0.9
PDPN-205ENST00000487038 GBF1Q92538 1859 aa9.45□□□□□ -0.9
PDPN-205ENST00000487038 SLC15A5A6NIM6 579 aa9.44□□□□□ -0.9
PDPN-205ENST00000487038 BAG3O95817 575 aa9.44□□□□□ -0.9
PDPN-205ENST00000487038 PLCG2P16885 1265 aa9.44□□□□□ -0.9
PDPN-205ENST00000487038 ADORA1P30542 326 aa9.44□□□□□ -0.9
PDPN-205ENST00000487038 PLA2G5P39877 138 aa9.44□□□□□ -0.9
PDPN-205ENST00000487038 Q3C1V9 767 aa9.44□□□□□ -0.9
PDPN-205ENST00000487038 USP17L2Q6R6M4 530 aa9.44□□□□□ -0.9
PDPN-205ENST00000487038 ATF7IPQ6VMQ6 1270 aa9.44□□□□□ -0.9
PDPN-205ENST00000487038 SLC39A5Q6ZMH5 540 aa9.44□□□□□ -0.9
PDPN-205ENST00000487038 MRPL50Q8N5N7 158 aaKnown RBP9.44□□□□□ -0.9
PDPN-205ENST00000487038 BADQ92934 168 aa9.44□□□□□ -0.9
PDPN-205ENST00000487038 NSUN4Q96CB9 384 aaKnown RBP9.44□□□□□ -0.9
PDPN-205ENST00000487038 FAM122AQ96E09 287 aa9.44□□□□□ -0.9
PDPN-205ENST00000487038 RNPC3Q96LT9 517 aaKnown RBP9.44□□□□□ -0.9
PDPN-205ENST00000487038 RAI14Q9P0K7 980 aa9.44□□□□□ -0.9
PDPN-205ENST00000487038 ZBTB21Q9ULJ3 1066 aa9.44□□□□□ -0.9
PDPN-205ENST00000487038 PARP14Q460N5 1801 aa9.44□□□□□ -0.9
PDPN-205ENST00000487038 ZNFX1Q9P2E3 1918 aaKnown RBP9.44□□□□□ -0.9
PDPN-205ENST00000487038 CHD9Q3L8U1 2897 aa9.44□□□□□ -0.9
PDPN-205ENST00000487038 A0A1B0GUL7 405 aa9.43□□□□□ -0.9
PDPN-205ENST00000487038 USP17L15C9J2P7 530 aa9.43□□□□□ -0.9
PDPN-205ENST00000487038 USP17L13C9JLJ4 530 aa9.43□□□□□ -0.9
PDPN-205ENST00000487038 USP17L11C9JVI0 530 aa9.43□□□□□ -0.9
PDPN-205ENST00000487038 USP17L18D6R9N7 530 aa9.43□□□□□ -0.9
PDPN-205ENST00000487038 USP17L22D6RA61 530 aa9.43□□□□□ -0.9
PDPN-205ENST00000487038 USP17L17D6RBQ6 530 aa9.43□□□□□ -0.9
PDPN-205ENST00000487038 USP17L19D6RCP7 530 aa9.43□□□□□ -0.9
PDPN-205ENST00000487038 USP17L20D6RJB6 530 aa9.43□□□□□ -0.9
PDPN-205ENST00000487038 PEX10O60683 326 aa9.43□□□□□ -0.9
PDPN-205ENST00000487038 GDF11O95390 407 aa9.43□□□□□ -0.9
PDPN-205ENST00000487038 HLA-DOAP06340 250 aa9.43□□□□□ -0.9
PDPN-205ENST00000487038 HOXC6P09630 235 aa9.43□□□□□ -0.9
PDPN-205ENST00000487038 PTPREP23469 700 aa9.43□□□□□ -0.9
PDPN-205ENST00000487038 USP14P54578 494 aa9.43□□□□□ -0.9
PDPN-205ENST00000487038 USP17L24Q0WX57 530 aa9.43□□□□□ -0.9
PDPN-205ENST00000487038 GRB14Q14449 540 aa9.43□□□□□ -0.9
PDPN-205ENST00000487038 RRP1BQ14684 758 aaKnown RBP9.43□□□□□ -0.9
PDPN-205ENST00000487038 SNX17Q15036 470 aa9.43□□□□□ -0.9
PDPN-205ENST00000487038 TRIM60Q495X7 471 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms