RNA–Protein interactions for RNA: ENST00000486935.2

SEMA4D-219, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-219ENST00000486935 HLA-DOAP06340 250 aa18.63■□□□□ 0.57
SEMA4D-219ENST00000486935 HMGCS2P54868 508 aa18.63■□□□□ 0.57
SEMA4D-219ENST00000486935 JAG1P78504 1218 aa18.63■□□□□ 0.57
SEMA4D-219ENST00000486935 TTF1Q15361 905 aaPredicted RBP18.63■□□□□ 0.57
SEMA4D-219ENST00000486935 CERS3Q8IU89 383 aa18.63■□□□□ 0.57
SEMA4D-219ENST00000486935 PROCA1Q8NCQ7 364 aaPredicted RBP18.63■□□□□ 0.57
SEMA4D-219ENST00000486935 DNAJC2Q99543 621 aaKnown RBP18.63■□□□□ 0.57
SEMA4D-219ENST00000486935 DNAJC18Q9H819 358 aa18.63■□□□□ 0.57
SEMA4D-219ENST00000486935 GOLIM4O00461 696 aa18.62■□□□□ 0.57
SEMA4D-219ENST00000486935 GDF11O95390 407 aa18.62■□□□□ 0.57
SEMA4D-219ENST00000486935 ASNSP08243 561 aa18.62■□□□□ 0.57
SEMA4D-219ENST00000486935 SLC9C2Q5TAH2 1124 aa18.62■□□□□ 0.57
SEMA4D-219ENST00000486935 ANKRD13CQ8N6S4 541 aa18.62■□□□□ 0.57
SEMA4D-219ENST00000486935 STAP2Q9UGK3 403 aa18.62■□□□□ 0.57
SEMA4D-219ENST00000486935 PNMA3Q9UL41 463 aa18.62■□□□□ 0.57
SEMA4D-219ENST00000486935 TTC41PQ6P2S7 1318 aa18.62■□□□□ 0.57
SEMA4D-219ENST00000486935 MYPNQ86TC9 1320 aa18.62■□□□□ 0.57
SEMA4D-219ENST00000486935 MYO5AQ9Y4I1 1855 aaKnown RBP18.62■□□□□ 0.57
SEMA4D-219ENST00000486935 MYH7P12883 1935 aa18.61■□□□□ 0.57
SEMA4D-219ENST00000486935 MAGEB6P1A0A0J9YX57 407 aa18.61■□□□□ 0.57
SEMA4D-219ENST00000486935 SHROOM1Q2M3G4 852 aaPredicted RBP18.61■□□□□ 0.57
SEMA4D-219ENST00000486935 TMED8Q6PL24 325 aaPredicted RBP18.61■□□□□ 0.57
SEMA4D-219ENST00000486935 WDR18Q9BV38 432 aa18.61■□□□□ 0.57
SEMA4D-219ENST00000486935 ERC2O15083 957 aa18.6■□□□□ 0.57
SEMA4D-219ENST00000486935 PRKCZQ05513 592 aa18.6■□□□□ 0.57
SEMA4D-219ENST00000486935 PABPC4Q13310 644 aaKnown RBP eCLIP18.6■□□□□ 0.57
SEMA4D-219ENST00000486935 MTMR2Q13614 643 aa18.6■□□□□ 0.57
SEMA4D-219ENST00000486935 SH3D19Q5HYK7 790 aa18.6■□□□□ 0.57
SEMA4D-219ENST00000486935 TTC22Q5TAA0 569 aa18.6■□□□□ 0.57
SEMA4D-219ENST00000486935 PI4K2BQ8TCG2 481 aa18.6■□□□□ 0.57
SEMA4D-219ENST00000486935 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.6■□□□□ 0.57
SEMA4D-219ENST00000486935 EDC3Q96F86 508 aaKnown RBP18.6■□□□□ 0.57
SEMA4D-219ENST00000486935 BOLA2Q9H3K6 86 aa18.6■□□□□ 0.57
SEMA4D-219ENST00000486935 OSBPL3Q9H4L5 887 aa18.6■□□□□ 0.57
SEMA4D-219ENST00000486935 BIN2Q9UBW5 565 aaPredicted RBP18.6■□□□□ 0.57
SEMA4D-219ENST00000486935 GABRQQ9UN88 632 aa18.6■□□□□ 0.57
SEMA4D-219ENST00000486935 GLRX3O76003 335 aaKnown RBP18.59■□□□□ 0.57
SEMA4D-219ENST00000486935 PDE6AP16499 860 aa18.59■□□□□ 0.57
SEMA4D-219ENST00000486935 GRK4P32298 578 aa18.59■□□□□ 0.57
SEMA4D-219ENST00000486935 BACE1P56817 501 aa18.59■□□□□ 0.57
SEMA4D-219ENST00000486935 RIOK1Q9BRS2 568 aaKnown RBP18.59■□□□□ 0.57
SEMA4D-219ENST00000486935 TMOD4Q9NZQ9 345 aa18.59■□□□□ 0.57
SEMA4D-219ENST00000486935 DOCK1Q14185 1865 aa18.58■□□□□ 0.57
SEMA4D-219ENST00000486935 ZNF532Q9HCE3 1301 aa18.58■□□□□ 0.57
SEMA4D-219ENST00000486935 TNPO2O14787 897 aaKnown RBP18.58■□□□□ 0.56
SEMA4D-219ENST00000486935 ATP5JP18859 108 aa18.58■□□□□ 0.56
SEMA4D-219ENST00000486935 MTFR1Q15390 333 aa18.58■□□□□ 0.56
SEMA4D-219ENST00000486935 PRPF38BQ5VTL8 546 aaKnown RBP18.58■□□□□ 0.56
SEMA4D-219ENST00000486935 TTC6Q86TZ1 520 aa18.58■□□□□ 0.56
SEMA4D-219ENST00000486935 ASCC2Q9H1I8 757 aaPredicted RBP18.58■□□□□ 0.56
SEMA4D-219ENST00000486935 GINM1Q9NU53 330 aa18.58■□□□□ 0.56
SEMA4D-219ENST00000486935 SERPINB13Q9UIV8 391 aa18.58■□□□□ 0.56
SEMA4D-219ENST00000486935 ZBTB21Q9ULJ3 1066 aa18.58■□□□□ 0.56
SEMA4D-219ENST00000486935 ZSWIM8A7E2V4 1837 aa18.58■□□□□ 0.56
SEMA4D-219ENST00000486935 MAST2Q6P0Q8 1798 aa18.58■□□□□ 0.56
SEMA4D-219ENST00000486935 C19orf81C9J6K1 198 aa18.57■□□□□ 0.56
SEMA4D-219ENST00000486935 USP17L10C9JJH3 530 aa18.57■□□□□ 0.56
SEMA4D-219ENST00000486935 GH2P01242 217 aa18.57■□□□□ 0.56
SEMA4D-219ENST00000486935 POLR3DP05423 398 aaPredicted RBP18.57■□□□□ 0.56
SEMA4D-219ENST00000486935 GCLCP48506 637 aaPredicted RBP18.57■□□□□ 0.56
SEMA4D-219ENST00000486935 TATDN1Q6P1N9 297 aa18.57■□□□□ 0.56
SEMA4D-219ENST00000486935 PAG1Q9NWQ8 432 aa18.57■□□□□ 0.56
SEMA4D-219ENST00000486935 TCRBV5S4A2TA0A5A2 114 aa18.56■□□□□ 0.56
SEMA4D-219ENST00000486935 GSPT1P15170 499 aaKnown RBP18.56■□□□□ 0.56
SEMA4D-219ENST00000486935 FLT3LGP49771 235 aa18.56■□□□□ 0.56
SEMA4D-219ENST00000486935 PLCD1P51178 756 aa18.56■□□□□ 0.56
SEMA4D-219ENST00000486935 CRNKL1Q9BZJ0 848 aaKnown RBP18.56■□□□□ 0.56
SEMA4D-219ENST00000486935 EHD4Q9H223 541 aa18.56■□□□□ 0.56
SEMA4D-219ENST00000486935 TRIM6-TRIM34B2RNG4 842 aa18.55■□□□□ 0.56
SEMA4D-219ENST00000486935 ADCY3O60266 1144 aa18.55■□□□□ 0.56
SEMA4D-219ENST00000486935 IRX3P78415 501 aaPredicted RBP18.55■□□□□ 0.56
SEMA4D-219ENST00000486935 FAM110CQ1W6H9 321 aa18.55■□□□□ 0.56
SEMA4D-219ENST00000486935 SLFNL1Q499Z3 407 aa18.55■□□□□ 0.56
SEMA4D-219ENST00000486935 CERKLQ49MI3 558 aaPredicted RBP18.55■□□□□ 0.56
SEMA4D-219ENST00000486935 COA7Q96BR5 231 aa18.55■□□□□ 0.56
SEMA4D-219ENST00000486935 P2RX7Q99572 595 aaKnown RBP18.55■□□□□ 0.56
SEMA4D-219ENST00000486935 HAUS7Q99871 368 aa18.55■□□□□ 0.56
SEMA4D-219ENST00000486935 MCM9Q9NXL9 1143 aa18.55■□□□□ 0.56
SEMA4D-219ENST00000486935 TAOK2Q9UL54 1235 aa18.55■□□□□ 0.56
SEMA4D-219ENST00000486935 PHIPQ8WWQ0 1821 aa18.54■□□□□ 0.56
SEMA4D-219ENST00000486935 CCL5P13501 91 aa18.54■□□□□ 0.56
SEMA4D-219ENST00000486935 UBXN2AP68543 259 aa18.54■□□□□ 0.56
SEMA4D-219ENST00000486935 RAB3GAP1Q15042 981 aa18.54■□□□□ 0.56
SEMA4D-219ENST00000486935 LCORLQ8N3X6 602 aa18.54■□□□□ 0.56
SEMA4D-219ENST00000486935 SLAIN1Q8ND83 568 aa18.54■□□□□ 0.56
SEMA4D-219ENST00000486935 EMILIN3Q9NT22 766 aa18.54■□□□□ 0.56
SEMA4D-219ENST00000486935 ELNP15502 786 aa18.53■□□□□ 0.56
SEMA4D-219ENST00000486935 HOXA7P31268 230 aaPredicted RBP18.53■□□□□ 0.56
SEMA4D-219ENST00000486935 ZYXQ15942 572 aaKnown RBP18.53■□□□□ 0.56
SEMA4D-219ENST00000486935 ABCB5Q2M3G0 1257 aa18.53■□□□□ 0.56
SEMA4D-219ENST00000486935 BMP2KLQ5H9B9 411 aa18.53■□□□□ 0.56
SEMA4D-219ENST00000486935 USP17L2Q6R6M4 530 aa18.53■□□□□ 0.56
SEMA4D-219ENST00000486935 SDR42E1Q8WUS8 393 aa18.53■□□□□ 0.56
SEMA4D-219ENST00000486935 RILPL2Q969X0 211 aa18.53■□□□□ 0.56
SEMA4D-219ENST00000486935 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.53■□□□□ 0.56
SEMA4D-219ENST00000486935 RNF208Q9H0X6 261 aa18.53■□□□□ 0.56
SEMA4D-219ENST00000486935 ARMT1Q9H993 441 aa18.53■□□□□ 0.56
SEMA4D-219ENST00000486935 CABP5Q9NP86 173 aa18.53■□□□□ 0.56
SEMA4D-219ENST00000486935 MKI67P46013 3256 aaKnown RBP18.53■□□□□ 0.56
SEMA4D-219ENST00000486935 PEX10O60683 326 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms