RNA–Protein interactions for RNA: ENST00000486554.1

TSC22D3-208, Transcript of TSC22 domain family member 3, humanhuman

TSL 2

Gene TSC22D3, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-208ENST00000486554 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.13■□□□□ 0.33
TSC22D3-208ENST00000486554 USP40Q9NVE5 1235 aa17.13■□□□□ 0.33
TSC22D3-208ENST00000486554 MSRAQ9UJ68 235 aa17.13■□□□□ 0.33
TSC22D3-208ENST00000486554 KIAA0355O15063 1070 aa17.12■□□□□ 0.33
TSC22D3-208ENST00000486554 FOXO4P98177 505 aa17.12■□□□□ 0.33
TSC22D3-208ENST00000486554 FOXK2Q01167 660 aa17.12■□□□□ 0.33
TSC22D3-208ENST00000486554 MAP2K5Q13163 448 aa17.12■□□□□ 0.33
TSC22D3-208ENST00000486554 DIXDC1Q155Q3 683 aa17.12■□□□□ 0.33
TSC22D3-208ENST00000486554 C1orf53Q5VUE5 145 aa17.12■□□□□ 0.33
TSC22D3-208ENST00000486554 CCDC30Q5VVM6 783 aa17.12■□□□□ 0.33
TSC22D3-208ENST00000486554 ANO1Q5XXA6 986 aa17.12■□□□□ 0.33
TSC22D3-208ENST00000486554 ZNF280CQ8ND82 737 aa17.12■□□□□ 0.33
TSC22D3-208ENST00000486554 EDC3Q96F86 508 aaKnown RBP17.12■□□□□ 0.33
TSC22D3-208ENST00000486554 NKX2-4Q9H2Z4 354 aa17.12■□□□□ 0.33
TSC22D3-208ENST00000486554 MYH16Q9H6N6 1097 aa17.12■□□□□ 0.33
TSC22D3-208ENST00000486554 TLL1O43897 1013 aa17.11■□□□□ 0.33
TSC22D3-208ENST00000486554 RAB30Q15771 203 aa17.11■□□□□ 0.33
TSC22D3-208ENST00000486554 CAVIN4Q5BKX8 364 aa17.11■□□□□ 0.33
TSC22D3-208ENST00000486554 HERVK_113Q902F9 699 aa17.11■□□□□ 0.33
TSC22D3-208ENST00000486554 ZBED9Q6R2W3 1325 aa17.11■□□□□ 0.33
TSC22D3-208ENST00000486554 REV3LO60673 3130 aa17.1■□□□□ 0.33
TSC22D3-208ENST00000486554 CYP2C19P33261 490 aa17.1■□□□□ 0.33
TSC22D3-208ENST00000486554 RGS3P49796 1198 aa17.1■□□□□ 0.33
TSC22D3-208ENST00000486554 HERVK_113P62684 666 aa17.1■□□□□ 0.33
TSC22D3-208ENST00000486554 ERVK-9P63128 1117 aa17.1■□□□□ 0.33
TSC22D3-208ENST00000486554 ERVK-24P63145 666 aa17.1■□□□□ 0.33
TSC22D3-208ENST00000486554 ATP2B2Q01814 1243 aa17.1■□□□□ 0.33
TSC22D3-208ENST00000486554 LMBR1LQ6UX01 489 aa17.1■□□□□ 0.33
TSC22D3-208ENST00000486554 TRPV1Q8NER1 839 aa17.1■□□□□ 0.33
TSC22D3-208ENST00000486554 PAGR1Q9BTK6 254 aa17.1■□□□□ 0.33
TSC22D3-208ENST00000486554 SLC28A3Q9HAS3 691 aa17.1■□□□□ 0.33
TSC22D3-208ENST00000486554 TMEM39AQ9NV64 488 aa17.1■□□□□ 0.33
TSC22D3-208ENST00000486554 IFT57Q9NWB7 429 aa17.1■□□□□ 0.33
TSC22D3-208ENST00000486554 PQBP1O60828 265 aaKnown RBP17.09■□□□□ 0.33
TSC22D3-208ENST00000486554 HNRNPUQ00839 825 aaKnown RBP eCLIP17.09■□□□□ 0.33
TSC22D3-208ENST00000486554 MAP3K10Q02779 954 aa17.09■□□□□ 0.33
TSC22D3-208ENST00000486554 CSPP1Q1MSJ5 1256 aa17.09■□□□□ 0.33
TSC22D3-208ENST00000486554 Q3C1V9 767 aa17.09■□□□□ 0.33
TSC22D3-208ENST00000486554 SH3BP5LQ7L8J4 393 aa17.09■□□□□ 0.33
TSC22D3-208ENST00000486554 NDUFB9Q9Y6M9 179 aa17.09■□□□□ 0.33
TSC22D3-208ENST00000486554 CHD9Q3L8U1 2897 aa17.09■□□□□ 0.33
TSC22D3-208ENST00000486554 ST18O60284 1047 aa17.08■□□□□ 0.32
TSC22D3-208ENST00000486554 CYBAP13498 195 aa17.08■□□□□ 0.32
TSC22D3-208ENST00000486554 CALD1Q05682 793 aaKnown RBP17.08■□□□□ 0.32
TSC22D3-208ENST00000486554 KCNH6Q9H252 994 aa17.08■□□□□ 0.32
TSC22D3-208ENST00000486554 RBPJLQ9UBG7 517 aa17.08■□□□□ 0.32
TSC22D3-208ENST00000486554 DDTLA6NHG4 134 aaPredicted RBP17.07■□□□□ 0.32
TSC22D3-208ENST00000486554 ENTPD3O75355 529 aa17.07■□□□□ 0.32
TSC22D3-208ENST00000486554 SLFN5Q08AF3 891 aa17.07■□□□□ 0.32
TSC22D3-208ENST00000486554 WDR78Q5VTH9 848 aa17.07■□□□□ 0.32
TSC22D3-208ENST00000486554 C8orf58Q8NAV2 365 aa17.07■□□□□ 0.32
TSC22D3-208ENST00000486554 PUS3Q9BZE2 481 aaKnown RBP17.07■□□□□ 0.32
TSC22D3-208ENST00000486554 CD320Q9NPF0 282 aa17.07■□□□□ 0.32
TSC22D3-208ENST00000486554 COG5Q9UP83 839 aa17.07■□□□□ 0.32
TSC22D3-208ENST00000486554 SALL2Q9Y467 1007 aaPredicted RBP17.07■□□□□ 0.32
TSC22D3-208ENST00000486554 LRRC41Q15345 812 aa17.06■□□□□ 0.32
TSC22D3-208ENST00000486554 SH3D19Q5HYK7 790 aa17.06■□□□□ 0.32
TSC22D3-208ENST00000486554 TMEM240Q5SV17 173 aa17.06■□□□□ 0.32
TSC22D3-208ENST00000486554 CCDC174Q6PII3 467 aa17.06■□□□□ 0.32
TSC22D3-208ENST00000486554 SLC44A5Q8NCS7 719 aa17.06■□□□□ 0.32
TSC22D3-208ENST00000486554 TBC1D2Q9BYX2 928 aa17.06■□□□□ 0.32
TSC22D3-208ENST00000486554 FAM196BA6NMK8 535 aa17.05■□□□□ 0.32
TSC22D3-208ENST00000486554 GLRX3O76003 335 aaKnown RBP17.05■□□□□ 0.32
TSC22D3-208ENST00000486554 GNAI1P63096 354 aa17.05■□□□□ 0.32
TSC22D3-208ENST00000486554 RASIP1Q5U651 963 aa17.05■□□□□ 0.32
TSC22D3-208ENST00000486554 PHOX2BQ99453 314 aa17.05■□□□□ 0.32
TSC22D3-208ENST00000486554 IDI2Q9BXS1 227 aa17.05■□□□□ 0.32
TSC22D3-208ENST00000486554 CHMP4AQ9BY43 222 aa17.05■□□□□ 0.32
TSC22D3-208ENST00000486554 TMOD4Q9NZQ9 345 aa17.05■□□□□ 0.32
TSC22D3-208ENST00000486554 YBX2Q9Y2T7 364 aaKnown RBP17.05■□□□□ 0.32
TSC22D3-208ENST00000486554 HOXA7P31268 230 aaPredicted RBP17.04■□□□□ 0.32
TSC22D3-208ENST00000486554 PPIGQ13427 754 aaKnown RBP eCLIP17.04■□□□□ 0.32
TSC22D3-208ENST00000486554 MTMR2Q13614 643 aa17.04■□□□□ 0.32
TSC22D3-208ENST00000486554 EPHA10Q5JZY3 1008 aa17.04■□□□□ 0.32
TSC22D3-208ENST00000486554 NPLOC4Q8TAT6 608 aa17.04■□□□□ 0.32
TSC22D3-208ENST00000486554 CDCA7LQ96GN5 454 aa17.04■□□□□ 0.32
TSC22D3-208ENST00000486554 STK31Q9BXU1 1019 aa17.04■□□□□ 0.32
TSC22D3-208ENST00000486554 OSBPL5Q9H0X9 879 aaPredicted RBP17.04■□□□□ 0.32
TSC22D3-208ENST00000486554 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.04■□□□□ 0.32
TSC22D3-208ENST00000486554 ATAD5Q96QE3 1844 aa17.03■□□□□ 0.32
TSC22D3-208ENST00000486554 MROH5Q6ZUA9 1318 aa17.03■□□□□ 0.32
TSC22D3-208ENST00000486554 CHD7Q9P2D1 2997 aa17.03■□□□□ 0.32
TSC22D3-208ENST00000486554 SLC15A5A6NIM6 579 aa17.03■□□□□ 0.32
TSC22D3-208ENST00000486554 USP17L5A8MUK1 530 aa17.03■□□□□ 0.32
TSC22D3-208ENST00000486554 E9PSI1 815 aa17.03■□□□□ 0.32
TSC22D3-208ENST00000486554 PRDX5P30044 214 aa17.03■□□□□ 0.32
TSC22D3-208ENST00000486554 PICALMQ13492 652 aa17.03■□□□□ 0.32
TSC22D3-208ENST00000486554 PPP2R2DQ66LE6 453 aa17.03■□□□□ 0.32
TSC22D3-208ENST00000486554 C16orf59Q7L2K0 433 aa17.03■□□□□ 0.32
TSC22D3-208ENST00000486554 G2E3Q7L622 706 aa17.03■□□□□ 0.32
TSC22D3-208ENST00000486554 LINS1Q8NG48 757 aa17.03■□□□□ 0.32
TSC22D3-208ENST00000486554 WDR66Q8TBY9 1149 aa17.03■□□□□ 0.32
TSC22D3-208ENST00000486554 AS3MTQ9HBK9 375 aa17.03■□□□□ 0.32
TSC22D3-208ENST00000486554 GBF1Q92538 1859 aa17.03■□□□□ 0.32
TSC22D3-208ENST00000486554 SEPT4O43236 478 aa17.02■□□□□ 0.32
TSC22D3-208ENST00000486554 GTPBP6O43824 516 aaPredicted RBP17.02■□□□□ 0.32
TSC22D3-208ENST00000486554 TIMP1P01033 207 aa17.02■□□□□ 0.32
TSC22D3-208ENST00000486554 ACRP10323 421 aa17.02■□□□□ 0.32
TSC22D3-208ENST00000486554 FAAP100Q0VG06 881 aa17.02■□□□□ 0.32
TSC22D3-208ENST00000486554 FAM47AQ5JRC9 791 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms