RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 KBTBD3Q8NAB2 608 aa13.29□□□□□ -0.28
SNX21-211ENST00000486336 SMCR8Q8TEV9 937 aaPredicted RBP13.29□□□□□ -0.28
SNX21-211ENST00000486336 GCC1Q96CN9 775 aa13.29□□□□□ -0.28
SNX21-211ENST00000486336 DDRGK1Q96HY6 314 aa13.29□□□□□ -0.28
SNX21-211ENST00000486336 PUS7LQ9H0K6 701 aaKnown RBP13.29□□□□□ -0.28
SNX21-211ENST00000486336 RWDD1Q9H446 243 aaPredicted RBP13.29□□□□□ -0.28
SNX21-211ENST00000486336 CABP5Q9NP86 173 aa13.29□□□□□ -0.28
SNX21-211ENST00000486336 TMOD4Q9NZQ9 345 aa13.29□□□□□ -0.28
SNX21-211ENST00000486336 ZBTB21Q9ULJ3 1066 aa13.29□□□□□ -0.28
SNX21-211ENST00000486336 AGTPBP1Q9UPW5 1226 aa13.29□□□□□ -0.28
SNX21-211ENST00000486336 TTC41PQ6P2S7 1318 aa13.29□□□□□ -0.28
SNX21-211ENST00000486336 SIPA1L1O43166 1804 aa13.28□□□□□ -0.28
SNX21-211ENST00000486336 USP17L10C9JJH3 530 aa13.28□□□□□ -0.28
SNX21-211ENST00000486336 MPHOSPH10O00566 681 aaKnown RBP13.28□□□□□ -0.28
SNX21-211ENST00000486336 RNF113AO15541 343 aaKnown RBP13.28□□□□□ -0.28
SNX21-211ENST00000486336 GLRX3O76003 335 aaKnown RBP13.28□□□□□ -0.28
SNX21-211ENST00000486336 FMNL1O95466 1100 aaPredicted RBP13.28□□□□□ -0.28
SNX21-211ENST00000486336 MX1P20591 662 aa13.28□□□□□ -0.28
SNX21-211ENST00000486336 OSBPP22059 807 aa13.28□□□□□ -0.28
SNX21-211ENST00000486336 PSMC4P43686 418 aa13.28□□□□□ -0.28
SNX21-211ENST00000486336 EVX2Q03828 476 aa13.28□□□□□ -0.28
SNX21-211ENST00000486336 MTMR2Q13614 643 aa13.28□□□□□ -0.28
SNX21-211ENST00000486336 AAMPQ13685 434 aa13.28□□□□□ -0.28
SNX21-211ENST00000486336 ABCB5Q2M3G0 1257 aa13.28□□□□□ -0.28
SNX21-211ENST00000486336 B4GALNT3Q6L9W6 998 aa13.28□□□□□ -0.28
SNX21-211ENST00000486336 AMOTL1Q8IY63 956 aa13.28□□□□□ -0.28
SNX21-211ENST00000486336 PROCA1Q8NCQ7 364 aaPredicted RBP13.28□□□□□ -0.28
SNX21-211ENST00000486336 WDR18Q9BV38 432 aa13.28□□□□□ -0.28
SNX21-211ENST00000486336 EHD4Q9H223 541 aa13.28□□□□□ -0.28
SNX21-211ENST00000486336 ATP8A2Q9NTI2 1148 aa13.28□□□□□ -0.28
SNX21-211ENST00000486336 GINM1Q9NU53 330 aa13.28□□□□□ -0.28
SNX21-211ENST00000486336 ATAD5Q96QE3 1844 aa13.27□□□□□ -0.28
SNX21-211ENST00000486336 BACE1P56817 501 aa13.27□□□□□ -0.29
SNX21-211ENST00000486336 IRX6P78412 446 aaPredicted RBP13.27□□□□□ -0.29
SNX21-211ENST00000486336 PABPC4Q13310 644 aaKnown RBP eCLIP13.27□□□□□ -0.29
SNX21-211ENST00000486336 ZYXQ15942 572 aaKnown RBP13.27□□□□□ -0.29
SNX21-211ENST00000486336 LRRFIP1Q32MZ4 808 aaKnown RBP13.27□□□□□ -0.29
SNX21-211ENST00000486336 TATDN1Q6P1N9 297 aa13.27□□□□□ -0.29
SNX21-211ENST00000486336 DYNLL2Q96FJ2 89 aa13.27□□□□□ -0.29
SNX21-211ENST00000486336 FEZ1Q99689 392 aa13.27□□□□□ -0.29
SNX21-211ENST00000486336 FSD1Q9BTV5 496 aa13.27□□□□□ -0.29
SNX21-211ENST00000486336 PNMA3Q9UL41 463 aa13.27□□□□□ -0.29
SNX21-211ENST00000486336 SLC45A1Q9Y2W3 748 aa13.27□□□□□ -0.29
SNX21-211ENST00000486336 PHIPQ8WWQ0 1821 aa13.27□□□□□ -0.29
SNX21-211ENST00000486336 CYP2D7A0A087X1C5 515 aa13.26□□□□□ -0.29
SNX21-211ENST00000486336 C19orf81C9J6K1 198 aa13.26□□□□□ -0.29
SNX21-211ENST00000486336 USP17L12C9JPN9 530 aa13.26□□□□□ -0.29
SNX21-211ENST00000486336 USP17L21D6R901 530 aa13.26□□□□□ -0.29
SNX21-211ENST00000486336 HOXD10P28358 340 aa13.26□□□□□ -0.29
SNX21-211ENST00000486336 SHMT1P34896 483 aa13.26□□□□□ -0.29
SNX21-211ENST00000486336 SH3D19Q5HYK7 790 aa13.26□□□□□ -0.29
SNX21-211ENST00000486336 USP17L2Q6R6M4 530 aa13.26□□□□□ -0.29
SNX21-211ENST00000486336 PI4K2BQ8TCG2 481 aa13.26□□□□□ -0.29
SNX21-211ENST00000486336 OSBP2Q969R2 916 aa13.26□□□□□ -0.29
SNX21-211ENST00000486336 ADGRA2Q96PE1 1338 aa13.26□□□□□ -0.29
SNX21-211ENST00000486336 PTCH2Q9Y6C5 1203 aa13.26□□□□□ -0.29
SNX21-211ENST00000486336 NAV1Q8NEY1 1877 aa13.25□□□□□ -0.29
SNX21-211ENST00000486336 APPP05067 770 aa13.25□□□□□ -0.29
SNX21-211ENST00000486336 ZFYP08048 801 aaPredicted RBP13.25□□□□□ -0.29
SNX21-211ENST00000486336 BCRP11274 1271 aa13.25□□□□□ -0.29
SNX21-211ENST00000486336 FCGRTP55899 365 aa13.25□□□□□ -0.29
SNX21-211ENST00000486336 IRX3P78415 501 aaPredicted RBP13.25□□□□□ -0.29
SNX21-211ENST00000486336 GABPAQ06546 454 aa13.25□□□□□ -0.29
SNX21-211ENST00000486336 STK11IPQ8N1F8 1099 aa13.25□□□□□ -0.29
SNX21-211ENST00000486336 ANKRD13CQ8N6S4 541 aa13.25□□□□□ -0.29
SNX21-211ENST00000486336 SLC44A5Q8NCS7 719 aa13.25□□□□□ -0.29
SNX21-211ENST00000486336 APPBP2Q92624 585 aa13.25□□□□□ -0.29
SNX21-211ENST00000486336 TRIM47Q96LD4 638 aa13.25□□□□□ -0.29
SNX21-211ENST00000486336 STRBPQ96SI9 672 aaKnown RBP13.25□□□□□ -0.29
SNX21-211ENST00000486336 LNPKQ9C0E8 428 aa13.25□□□□□ -0.29
SNX21-211ENST00000486336 ASCC2Q9H1I8 757 aaPredicted RBP13.25□□□□□ -0.29
SNX21-211ENST00000486336 MYH7P12883 1935 aa13.25□□□□□ -0.29
SNX21-211ENST00000486336 PTPRFP10586 1907 aa13.24□□□□□ -0.29
SNX21-211ENST00000486336 M0R2C6 588 aa13.24□□□□□ -0.29
SNX21-211ENST00000486336 MYCP01106 439 aaPredicted RBP13.24□□□□□ -0.29
SNX21-211ENST00000486336 GNRH1P01148 92 aa13.24□□□□□ -0.29
SNX21-211ENST00000486336 IGHDP01880 384 aa13.24□□□□□ -0.29
SNX21-211ENST00000486336 CTGFP29279 349 aa13.24□□□□□ -0.29
SNX21-211ENST00000486336 MLLT1Q03111 559 aaPredicted RBP13.24□□□□□ -0.29
SNX21-211ENST00000486336 SEPT2Q15019 361 aa13.24□□□□□ -0.29
SNX21-211ENST00000486336 SLC9C1Q4G0N8 1177 aa13.24□□□□□ -0.29
SNX21-211ENST00000486336 C12orf60Q5U649 245 aa13.24□□□□□ -0.29
SNX21-211ENST00000486336 CTR9Q6PD62 1173 aa13.24□□□□□ -0.29
SNX21-211ENST00000486336 NBPF11Q86T75 865 aa13.24□□□□□ -0.29
SNX21-211ENST00000486336 SWAP70Q9UH65 585 aa13.24□□□□□ -0.29
SNX21-211ENST00000486336 MINDY4BA8MYZ0 360 aa13.23□□□□□ -0.29
SNX21-211ENST00000486336 SMIM22K7EJ46 135 aa13.23□□□□□ -0.29
SNX21-211ENST00000486336 GPAA1O43292 621 aa13.23□□□□□ -0.29
SNX21-211ENST00000486336 CDK8P49336 464 aa13.23□□□□□ -0.29
SNX21-211ENST00000486336 PDE1AP54750 535 aa13.23□□□□□ -0.29
SNX21-211ENST00000486336 RAET1EQ8TD07 263 aa13.23□□□□□ -0.29
SNX21-211ENST00000486336 ACER1Q8TDN7 264 aa13.23□□□□□ -0.29
SNX21-211ENST00000486336 SEC62Q99442 399 aaKnown RBP13.23□□□□□ -0.29
SNX21-211ENST00000486336 P2RX7Q99572 595 aaKnown RBP13.23□□□□□ -0.29
SNX21-211ENST00000486336 EMILIN3Q9NT22 766 aa13.23□□□□□ -0.29
SNX21-211ENST00000486336 SRRDQ9UH36 339 aa13.23□□□□□ -0.29
SNX21-211ENST00000486336 MYPNQ86TC9 1320 aa13.22□□□□□ -0.29
SNX21-211ENST00000486336 BAZ2AQ9UIF9 1905 aaKnown RBP13.22□□□□□ -0.29
SNX21-211ENST00000486336 GSG1L2A8MUP6 293 aa13.22□□□□□ -0.29
SNX21-211ENST00000486336 GUCY1A2P33402 732 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms