RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 EMILIN3Q9NT22 766 aa10.53□□□□□ -0.72
XRN1-212ENST00000486211 XRCC5P13010 732 aaKnown RBP10.52□□□□□ -0.73
XRN1-212ENST00000486211 CYP2B6P20813 491 aa10.52□□□□□ -0.73
XRN1-212ENST00000486211 RTP1P59025 263 aa10.52□□□□□ -0.73
XRN1-212ENST00000486211 TCP10Q12799 353 aa10.52□□□□□ -0.73
XRN1-212ENST00000486211 CHAF1AQ13111 956 aaPredicted RBP10.52□□□□□ -0.73
XRN1-212ENST00000486211 CCDC146Q8IYE0 955 aa10.52□□□□□ -0.73
XRN1-212ENST00000486211 TBC1D22AQ8WUA7 517 aa10.52□□□□□ -0.73
XRN1-212ENST00000486211 SENP6Q9GZR1 1112 aaPredicted RBP10.52□□□□□ -0.73
XRN1-212ENST00000486211 THEGQ9P2T0 379 aa10.52□□□□□ -0.73
XRN1-212ENST00000486211 FAM198AQ9UFP1 575 aa10.52□□□□□ -0.73
XRN1-212ENST00000486211 IQSEC3Q9UPP2 1182 aaPredicted RBP10.52□□□□□ -0.73
XRN1-212ENST00000486211 LOC285556D6RIA3 1793 aa10.52□□□□□ -0.73
XRN1-212ENST00000486211 TRIM75PA6NK02 468 aa10.51□□□□□ -0.73
XRN1-212ENST00000486211 GCLCP48506 637 aaPredicted RBP10.51□□□□□ -0.73
XRN1-212ENST00000486211 CCDC30Q5VVM6 783 aa10.51□□□□□ -0.73
XRN1-212ENST00000486211 CDC42EP5Q6NZY7 148 aa10.51□□□□□ -0.73
XRN1-212ENST00000486211 LDHAL6AQ6ZMR3 332 aa10.51□□□□□ -0.73
XRN1-212ENST00000486211 ZFPM1Q8IX07 1006 aa10.51□□□□□ -0.73
XRN1-212ENST00000486211 BADQ92934 168 aa10.51□□□□□ -0.73
XRN1-212ENST00000486211 NECAB3Q96P71 396 aaPredicted RBP10.51□□□□□ -0.73
XRN1-212ENST00000486211 LRFN3Q9BTN0 628 aa10.51□□□□□ -0.73
XRN1-212ENST00000486211 PICK1Q9NRD5 415 aa10.51□□□□□ -0.73
XRN1-212ENST00000486211 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.51□□□□□ -0.73
XRN1-212ENST00000486211 PRKAG2Q9UGJ0 569 aa10.51□□□□□ -0.73
XRN1-212ENST00000486211 PNMA3Q9UL41 463 aa10.51□□□□□ -0.73
XRN1-212ENST00000486211 HCN4Q9Y3Q4 1203 aa10.51□□□□□ -0.73
XRN1-212ENST00000486211 DOCK2Q92608 1830 aa10.51□□□□□ -0.73
XRN1-212ENST00000486211 DOCK1Q14185 1865 aa10.51□□□□□ -0.73
XRN1-212ENST00000486211 MRPS5P82675 430 aaKnown RBP10.5□□□□□ -0.73
XRN1-212ENST00000486211 MAP3K10Q02779 954 aa10.5□□□□□ -0.73
XRN1-212ENST00000486211 G2E3Q7L622 706 aa10.5□□□□□ -0.73
XRN1-212ENST00000486211 CCDC84Q86UT8 332 aaPredicted RBP10.5□□□□□ -0.73
XRN1-212ENST00000486211 USP6NLQ92738 828 aa10.5□□□□□ -0.73
XRN1-212ENST00000486211 PCGF6Q9BYE7 350 aa10.5□□□□□ -0.73
XRN1-212ENST00000486211 MORF4L1Q9UBU8 362 aa10.5□□□□□ -0.73
XRN1-212ENST00000486211 SUGT1Q9Y2Z0 365 aa10.5□□□□□ -0.73
XRN1-212ENST00000486211 DAGLAQ9Y4D2 1042 aa10.5□□□□□ -0.73
XRN1-212ENST00000486211 PCDHGA10Q9Y5H3 936 aa10.5□□□□□ -0.73
XRN1-212ENST00000486211 MAST3O60307 1309 aa10.5□□□□□ -0.73
XRN1-212ENST00000486211 RLFQ13129 1914 aa10.49□□□□□ -0.73
XRN1-212ENST00000486211 PPP1R3GB7ZBB8 358 aa10.49□□□□□ -0.73
XRN1-212ENST00000486211 SLURP2P0DP57 97 aa10.49□□□□□ -0.73
XRN1-212ENST00000486211 ZKSCAN1P17029 563 aaPredicted RBP10.49□□□□□ -0.73
XRN1-212ENST00000486211 EPHB4P54760 987 aa10.49□□□□□ -0.73
XRN1-212ENST00000486211 CCL14Q16627 93 aa10.49□□□□□ -0.73
XRN1-212ENST00000486211 EPHA10Q5JZY3 1008 aa10.49□□□□□ -0.73
XRN1-212ENST00000486211 AKNAD1Q5T1N1 836 aa10.49□□□□□ -0.73
XRN1-212ENST00000486211 ALYREFQ86V81 257 aaKnown RBP10.49□□□□□ -0.73
XRN1-212ENST00000486211 TRMT44Q8IYL2 757 aaKnown RBP10.49□□□□□ -0.73
XRN1-212ENST00000486211 TSPYL6Q8N831 410 aa10.49□□□□□ -0.73
XRN1-212ENST00000486211 PROCA1Q8NCQ7 364 aaPredicted RBP10.49□□□□□ -0.73
XRN1-212ENST00000486211 CNNM1Q9NRU3 951 aa10.49□□□□□ -0.73
XRN1-212ENST00000486211 IFT57Q9NWB7 429 aa10.49□□□□□ -0.73
XRN1-212ENST00000486211 CHMP3Q9Y3E7 222 aa10.49□□□□□ -0.73
XRN1-212ENST00000486211 PEX10O60683 326 aa10.48□□□□□ -0.73
XRN1-212ENST00000486211 DNAJB2P25686 324 aa10.48□□□□□ -0.73
XRN1-212ENST00000486211 TRIM26Q12899 539 aaPredicted RBP10.48□□□□□ -0.73
XRN1-212ENST00000486211 PDE3AQ14432 1141 aa10.48□□□□□ -0.73
XRN1-212ENST00000486211 LMBR1LQ6UX01 489 aa10.48□□□□□ -0.73
XRN1-212ENST00000486211 SH3BP5LQ7L8J4 393 aa10.48□□□□□ -0.73
XRN1-212ENST00000486211 SOCS4Q8WXH5 440 aa10.48□□□□□ -0.73
XRN1-212ENST00000486211 PPM1EQ8WY54 764 aa10.48□□□□□ -0.73
XRN1-212ENST00000486211 RUNDC1Q96C34 613 aa10.48□□□□□ -0.73
XRN1-212ENST00000486211 NUDT12Q9BQG2 462 aa10.48□□□□□ -0.73
XRN1-212ENST00000486211 PUS3Q9BZE2 481 aaKnown RBP10.48□□□□□ -0.73
XRN1-212ENST00000486211 ASCC2Q9H1I8 757 aaPredicted RBP10.48□□□□□ -0.73
XRN1-212ENST00000486211 ZNF576Q9H609 170 aa10.48□□□□□ -0.73
XRN1-212ENST00000486211 EPHX3Q9H6B9 360 aa10.48□□□□□ -0.73
XRN1-212ENST00000486211 MYH16Q9H6N6 1097 aa10.48□□□□□ -0.73
XRN1-212ENST00000486211 PDLIM7Q9NR12 457 aa10.48□□□□□ -0.73
XRN1-212ENST00000486211 ATP11BQ9Y2G3 1177 aa10.48□□□□□ -0.73
XRN1-212ENST00000486211 TRIM43BA6NCK2 446 aa10.47□□□□□ -0.73
XRN1-212ENST00000486211 DNM1LO00429 736 aa10.47□□□□□ -0.73
XRN1-212ENST00000486211 CTNND1O60716 968 aaKnown RBP10.47□□□□□ -0.73
XRN1-212ENST00000486211 BMP1P13497 986 aa10.47□□□□□ -0.73
XRN1-212ENST00000486211 SNX17Q15036 470 aa10.47□□□□□ -0.73
XRN1-212ENST00000486211 MORN1Q5T089 497 aa10.47□□□□□ -0.73
XRN1-212ENST00000486211 TYW1BQ6NUM6 668 aa10.47□□□□□ -0.73
XRN1-212ENST00000486211 SH3RF1Q7Z6J0 888 aa10.47□□□□□ -0.73
XRN1-212ENST00000486211 LINS1Q8NG48 757 aa10.47□□□□□ -0.73
XRN1-212ENST00000486211 TRIM43Q96BQ3 446 aaPredicted RBP10.47□□□□□ -0.73
XRN1-212ENST00000486211 RNPC3Q96LT9 517 aaKnown RBP10.47□□□□□ -0.73
XRN1-212ENST00000486211 RFX7Q2KHR2 1363 aa10.47□□□□□ -0.73
XRN1-212ENST00000486211 MUC6Q6W4X9 2439 aa10.47□□□□□ -0.73
XRN1-212ENST00000486211 ITGB8P26012 769 aa10.46□□□□□ -0.73
XRN1-212ENST00000486211 GNAI1P63096 354 aa10.46□□□□□ -0.73
XRN1-212ENST00000486211 ADGRE1Q14246 886 aa10.46□□□□□ -0.73
XRN1-212ENST00000486211 DIXDC1Q155Q3 683 aa10.46□□□□□ -0.73
XRN1-212ENST00000486211 CCDC57Q2TAC2 916 aa10.46□□□□□ -0.73
XRN1-212ENST00000486211 TAF7LQ5H9L4 462 aa10.46□□□□□ -0.73
XRN1-212ENST00000486211 SLC39A5Q6ZMH5 540 aa10.46□□□□□ -0.73
XRN1-212ENST00000486211 VPS37DQ86XT2 251 aa10.46□□□□□ -0.73
XRN1-212ENST00000486211 LPAR1Q92633 364 aa10.46□□□□□ -0.73
XRN1-212ENST00000486211 TXNRD2Q9NNW7 524 aa10.46□□□□□ -0.73
XRN1-212ENST00000486211 C11orf16Q9NQ32 467 aa10.46□□□□□ -0.73
XRN1-212ENST00000486211 PRDM5Q9NQX1 630 aaPredicted RBP10.46□□□□□ -0.73
XRN1-212ENST00000486211 RABGEF1Q9UJ41 708 aa10.46□□□□□ -0.73
XRN1-212ENST00000486211 TCF20Q9UGU0 1960 aaKnown RBP10.45□□□□□ -0.74
XRN1-212ENST00000486211 RGS2P41220 211 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms