RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 CDCA7LQ96GN5 454 aa23.82■■□□□ 1.4
CHRD-216ENST00000486066 AS3MTQ9HBK9 375 aa23.82■■□□□ 1.4
CHRD-216ENST00000486066 RBPJLQ9UBG7 517 aa23.82■■□□□ 1.4
CHRD-216ENST00000486066 MCAMP43121 646 aa23.81■■□□□ 1.4
CHRD-216ENST00000486066 CACNB2Q08289 660 aaPredicted RBP23.81■■□□□ 1.4
CHRD-216ENST00000486066 SHROOM1Q2M3G4 852 aaPredicted RBP23.81■■□□□ 1.4
CHRD-216ENST00000486066 MORN1Q5T089 497 aa23.81■■□□□ 1.4
CHRD-216ENST00000486066 NUDT12Q9BQG2 462 aa23.81■■□□□ 1.4
CHRD-216ENST00000486066 PI4KBQ9UBF8 816 aa23.81■■□□□ 1.4
CHRD-216ENST00000486066 Q3C1V9 767 aa23.8■■□□□ 1.4
CHRD-216ENST00000486066 TEX11Q8IYF3 940 aa23.8■■□□□ 1.4
CHRD-216ENST00000486066 SH3RF3Q8TEJ3 882 aaPredicted RBP23.8■■□□□ 1.4
CHRD-216ENST00000486066 API5Q9BZZ5 524 aaKnown RBP23.8■■□□□ 1.4
CHRD-216ENST00000486066 SRGAP3O43295 1099 aa23.79■■□□□ 1.4
CHRD-216ENST00000486066 ASNSP08243 561 aa23.79■■□□□ 1.4
CHRD-216ENST00000486066 CT47B1P0C2W7 299 aaPredicted RBP23.79■■□□□ 1.4
CHRD-216ENST00000486066 LRRC26Q2I0M4 334 aa23.79■■□□□ 1.4
CHRD-216ENST00000486066 TRMT44Q8IYL2 757 aaKnown RBP23.79■■□□□ 1.4
CHRD-216ENST00000486066 GPRC5AQ8NFJ5 357 aa23.79■■□□□ 1.4
CHRD-216ENST00000486066 UBE2OQ9C0C9 1292 aaKnown RBP23.79■■□□□ 1.4
CHRD-216ENST00000486066 PORCNQ9H237 461 aa23.79■■□□□ 1.4
CHRD-216ENST00000486066 DHX36Q9H2U1 1008 aaKnown RBP23.79■■□□□ 1.4
CHRD-216ENST00000486066 LTBP2Q14767 1821 aa23.78■■□□□ 1.4
CHRD-216ENST00000486066 C19orf81C9J6K1 198 aa23.78■■□□□ 1.4
CHRD-216ENST00000486066 POTEB2H3BUK9 544 aa23.78■■□□□ 1.4
CHRD-216ENST00000486066 MAPK4P31152 587 aa23.78■■□□□ 1.4
CHRD-216ENST00000486066 PPP4CP60510 307 aa23.78■■□□□ 1.4
CHRD-216ENST00000486066 IRX3P78415 501 aaPredicted RBP23.78■■□□□ 1.4
CHRD-216ENST00000486066 GINM1Q9NU53 330 aa23.78■■□□□ 1.4
CHRD-216ENST00000486066 MUC3AQ02505 3323 aa23.78■■□□□ 1.4
CHRD-216ENST00000486066 CCND3P30281 292 aaPredicted RBP23.77■■□□□ 1.4
CHRD-216ENST00000486066 ERVK-9P63128 1117 aa23.77■■□□□ 1.4
CHRD-216ENST00000486066 ERVK-24P63145 666 aa23.77■■□□□ 1.4
CHRD-216ENST00000486066 CCL14Q16627 93 aa23.77■■□□□ 1.4
CHRD-216ENST00000486066 FAM109BQ6ICB4 259 aaPredicted RBP23.76■■□□□ 1.39
CHRD-216ENST00000486066 GPR142Q7Z601 462 aa23.76■■□□□ 1.39
CHRD-216ENST00000486066 ADGRA1Q86SQ6 560 aa23.76■■□□□ 1.39
CHRD-216ENST00000486066 EMILIN3Q9NT22 766 aa23.76■■□□□ 1.39
CHRD-216ENST00000486066 RAI14Q9P0K7 980 aa23.76■■□□□ 1.39
CHRD-216ENST00000486066 FLT1P17948 1338 aa23.76■■□□□ 1.39
CHRD-216ENST00000486066 USP17L10C9JJH3 530 aa23.75■■□□□ 1.39
CHRD-216ENST00000486066 IGHA2P01877 340 aa23.75■■□□□ 1.39
CHRD-216ENST00000486066 ZKSCAN1P17029 563 aaPredicted RBP23.75■■□□□ 1.39
CHRD-216ENST00000486066 NEUROD6Q96NK8 337 aa23.75■■□□□ 1.39
CHRD-216ENST00000486066 TMOD4Q9NZQ9 345 aa23.75■■□□□ 1.39
CHRD-216ENST00000486066 ZBTB21Q9ULJ3 1066 aa23.75■■□□□ 1.39
CHRD-216ENST00000486066 CNMDO75829 334 aa23.74■■□□□ 1.39
CHRD-216ENST00000486066 RGS2P41220 211 aa23.74■■□□□ 1.39
CHRD-216ENST00000486066 FOXP4Q8IVH2 680 aaPredicted RBP23.74■■□□□ 1.39
CHRD-216ENST00000486066 GTF3C2Q8WUA4 911 aaPredicted RBP23.74■■□□□ 1.39
CHRD-216ENST00000486066 GUCD1Q96NT3 240 aa23.74■■□□□ 1.39
CHRD-216ENST00000486066 APBA2Q99767 749 aa23.74■■□□□ 1.39
CHRD-216ENST00000486066 RLFQ13129 1914 aa23.73■■□□□ 1.39
CHRD-216ENST00000486066 GNAI3P08754 354 aa23.73■■□□□ 1.39
CHRD-216ENST00000486066 ARHGAP45Q92619 1136 aa23.73■■□□□ 1.39
CHRD-216ENST00000486066 C12orf42Q96LP6 360 aa23.73■■□□□ 1.39
CHRD-216ENST00000486066 COL25A1Q9BXS0 654 aaPredicted RBP23.73■■□□□ 1.39
CHRD-216ENST00000486066 AATFQ9NY61 560 aaKnown RBP eCLIP23.73■■□□□ 1.39
CHRD-216ENST00000486066 MYH1P12882 1939 aa23.72■■□□□ 1.39
CHRD-216ENST00000486066 GDF11O95390 407 aa23.72■■□□□ 1.39
CHRD-216ENST00000486066 UQCRFS1P1P0C7P4 283 aa23.72■■□□□ 1.39
CHRD-216ENST00000486066 PDE3AQ14432 1141 aa23.72■■□□□ 1.39
CHRD-216ENST00000486066 PLEKHH3Q7Z736 793 aa23.72■■□□□ 1.39
CHRD-216ENST00000486066 TGFBRAP1Q8WUH2 860 aa23.72■■□□□ 1.39
CHRD-216ENST00000486066 PNMA6EA0A0J9YXQ4 647 aa23.71■■□□□ 1.39
CHRD-216ENST00000486066 PLCG2P16885 1265 aa23.71■■□□□ 1.39
CHRD-216ENST00000486066 MDM2Q00987 491 aaPredicted RBP23.71■■□□□ 1.39
CHRD-216ENST00000486066 MAPKAPK5Q8IW41 473 aa23.71■■□□□ 1.39
CHRD-216ENST00000486066 FLRT1Q9NZU1 646 aa23.71■■□□□ 1.39
CHRD-216ENST00000486066 LRP2BPQ9P2M1 347 aa23.71■■□□□ 1.39
CHRD-216ENST00000486066 PALD1Q9ULE6 856 aa23.71■■□□□ 1.39
CHRD-216ENST00000486066 HOXC6P09630 235 aa23.7■■□□□ 1.38
CHRD-216ENST00000486066 RARSP54136 660 aaKnown RBP23.7■■□□□ 1.38
CHRD-216ENST00000486066 MAP2K5Q13163 448 aa23.7■■□□□ 1.38
CHRD-216ENST00000486066 NAA16Q6N069 864 aaPredicted RBP23.7■■□□□ 1.38
CHRD-216ENST00000486066 ZNF236Q9UL36 1845 aa23.7■■□□□ 1.38
CHRD-216ENST00000486066 ZNF316A6NFI3 1004 aaPredicted RBP23.69■■□□□ 1.38
CHRD-216ENST00000486066 IGSF3O75054 1194 aa23.69■■□□□ 1.38
CHRD-216ENST00000486066 BAG3O95817 575 aa23.69■■□□□ 1.38
CHRD-216ENST00000486066 CYP2E1P05181 493 aaPredicted RBP23.69■■□□□ 1.38
CHRD-216ENST00000486066 LBX2Q6XYB7 198 aa23.69■■□□□ 1.38
CHRD-216ENST00000486066 GPR108Q9NPR9 543 aa23.69■■□□□ 1.38
CHRD-216ENST00000486066 RABGAP1Q9Y3P9 1069 aa23.69■■□□□ 1.38
CHRD-216ENST00000486066 GORABQ5T7V8 394 aa23.68■■□□□ 1.38
CHRD-216ENST00000486066 TATDN1Q6P1N9 297 aa23.68■■□□□ 1.38
CHRD-216ENST00000486066 USP17L2Q6R6M4 530 aa23.68■■□□□ 1.38
CHRD-216ENST00000486066 PAGR1Q9BTK6 254 aa23.68■■□□□ 1.38
CHRD-216ENST00000486066 TTC28Q96AY4 2481 aa23.67■■□□□ 1.38
CHRD-216ENST00000486066 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.67■■□□□ 1.38
CHRD-216ENST00000486066 ZNF512BQ96KM6 892 aaPredicted RBP23.67■■□□□ 1.38
CHRD-216ENST00000486066 A0A0G2JMZ2 1700 aa23.67■■□□□ 1.38
CHRD-216ENST00000486066 GRB14Q14449 540 aa23.66■■□□□ 1.38
CHRD-216ENST00000486066 EDC3Q96F86 508 aaKnown RBP23.66■■□□□ 1.38
CHRD-216ENST00000486066 NOL10Q9BSC4 688 aaKnown RBP23.66■■□□□ 1.38
CHRD-216ENST00000486066 SNRKQ9NRH2 765 aa23.66■■□□□ 1.38
CHRD-216ENST00000486066 SLC15A5A6NIM6 579 aa23.65■■□□□ 1.38
CHRD-216ENST00000486066 PTPREP23469 700 aa23.65■■□□□ 1.38
CHRD-216ENST00000486066 CATSPERGQ6ZRH7 1159 aa23.65■■□□□ 1.38
CHRD-216ENST00000486066 CRACR2BQ8N4Y2 399 aaPredicted RBP23.65■■□□□ 1.38
CHRD-216ENST00000486066 TRPV1Q8NER1 839 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms