RNA–Protein interactions for RNA: ENST00000485980.1

PLXNB3-208, Transcript of plexin B3, humanhuman

TSL 3

Gene PLXNB3, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-208ENST00000485980 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.01■□□□□ 0.63
PLXNB3-208ENST00000485980 FTSJ3Q8IY81 847 aaKnown RBP19.01■□□□□ 0.63
PLXNB3-208ENST00000485980 TRMT44Q8IYL2 757 aaKnown RBP19.01■□□□□ 0.63
PLXNB3-208ENST00000485980 NSUN4Q96CB9 384 aaKnown RBP19.01■□□□□ 0.63
PLXNB3-208ENST00000485980 CWC22Q9HCG8 908 aaKnown RBP19.01■□□□□ 0.63
PLXNB3-208ENST00000485980 TXNRD2Q9NNW7 524 aa19.01■□□□□ 0.63
PLXNB3-208ENST00000485980 HMG20BQ9P0W2 317 aa19.01■□□□□ 0.63
PLXNB3-208ENST00000485980 HERC5Q9UII4 1024 aaKnown RBP19.01■□□□□ 0.63
PLXNB3-208ENST00000485980 COL6A1P12109 1028 aa19■□□□□ 0.63
PLXNB3-208ENST00000485980 CCND3P30281 292 aaPredicted RBP19■□□□□ 0.63
PLXNB3-208ENST00000485980 MAPK4P31152 587 aa19■□□□□ 0.63
PLXNB3-208ENST00000485980 PI16Q6UXB8 463 aa19■□□□□ 0.63
PLXNB3-208ENST00000485980 FAM161BQ96MY7 647 aa19■□□□□ 0.63
PLXNB3-208ENST00000485980 NOL10Q9BSC4 688 aaKnown RBP19■□□□□ 0.63
PLXNB3-208ENST00000485980 PAGR1Q9BTK6 254 aa19■□□□□ 0.63
PLXNB3-208ENST00000485980 WDR18Q9BV38 432 aa19■□□□□ 0.63
PLXNB3-208ENST00000485980 PI4KBQ9UBF8 816 aa19■□□□□ 0.63
PLXNB3-208ENST00000485980 ASNSP08243 561 aa18.99■□□□□ 0.63
PLXNB3-208ENST00000485980 HOXA7P31268 230 aaPredicted RBP18.99■□□□□ 0.63
PLXNB3-208ENST00000485980 RGS2P41220 211 aa18.99■□□□□ 0.63
PLXNB3-208ENST00000485980 CCL14Q16627 93 aa18.99■□□□□ 0.63
PLXNB3-208ENST00000485980 Q3C1V9 767 aa18.99■□□□□ 0.63
PLXNB3-208ENST00000485980 LHX8Q68G74 356 aa18.99■□□□□ 0.63
PLXNB3-208ENST00000485980 ATF7IPQ6VMQ6 1270 aa18.99■□□□□ 0.63
PLXNB3-208ENST00000485980 SPATA5Q8NB90 893 aa18.99■□□□□ 0.63
PLXNB3-208ENST00000485980 SH3RF3Q8TEJ3 882 aaPredicted RBP18.99■□□□□ 0.63
PLXNB3-208ENST00000485980 LBHD1Q9BQE6 289 aaPredicted RBP18.99■□□□□ 0.63
PLXNB3-208ENST00000485980 TRIM34Q9BYJ4 488 aa18.99■□□□□ 0.63
PLXNB3-208ENST00000485980 RBPJLQ9UBG7 517 aa18.99■□□□□ 0.63
PLXNB3-208ENST00000485980 C19orf81C9J6K1 198 aa18.98■□□□□ 0.63
PLXNB3-208ENST00000485980 GPR142Q7Z601 462 aa18.98■□□□□ 0.63
PLXNB3-208ENST00000485980 PORCNQ9H237 461 aa18.98■□□□□ 0.63
PLXNB3-208ENST00000485980 LRP2BPQ9P2M1 347 aa18.98■□□□□ 0.63
PLXNB3-208ENST00000485980 DNAH12Q6ZR08 3092 aa18.98■□□□□ 0.63
PLXNB3-208ENST00000485980 LAMA2P24043 3122 aaKnown RBP18.98■□□□□ 0.63
PLXNB3-208ENST00000485980 COL2A1P02458 1487 aaPredicted RBP18.97■□□□□ 0.63
PLXNB3-208ENST00000485980 USP17L10C9JJH3 530 aa18.97■□□□□ 0.63
PLXNB3-208ENST00000485980 SRGAP3O43295 1099 aa18.97■□□□□ 0.63
PLXNB3-208ENST00000485980 ERVK-9P63128 1117 aa18.97■□□□□ 0.63
PLXNB3-208ENST00000485980 ERVK-24P63145 666 aa18.97■□□□□ 0.63
PLXNB3-208ENST00000485980 PLEKHH3Q7Z736 793 aa18.97■□□□□ 0.63
PLXNB3-208ENST00000485980 CRACR2BQ8N4Y2 399 aaPredicted RBP18.97■□□□□ 0.63
PLXNB3-208ENST00000485980 GUCD1Q96NT3 240 aa18.97■□□□□ 0.63
PLXNB3-208ENST00000485980 SENP6Q9GZR1 1112 aaPredicted RBP18.97■□□□□ 0.63
PLXNB3-208ENST00000485980 DHX36Q9H2U1 1008 aaKnown RBP18.97■□□□□ 0.63
PLXNB3-208ENST00000485980 POTEB2H3BUK9 544 aa18.96■□□□□ 0.63
PLXNB3-208ENST00000485980 GDF11O95390 407 aa18.96■□□□□ 0.63
PLXNB3-208ENST00000485980 TRIM27P14373 513 aa18.96■□□□□ 0.63
PLXNB3-208ENST00000485980 JAG1P78504 1218 aa18.96■□□□□ 0.63
PLXNB3-208ENST00000485980 USP6NLQ92738 828 aa18.96■□□□□ 0.63
PLXNB3-208ENST00000485980 CLUAP1Q96AJ1 413 aa18.96■□□□□ 0.63
PLXNB3-208ENST00000485980 MEIS3Q99687 375 aa18.96■□□□□ 0.63
PLXNB3-208ENST00000485980 BAG3O95817 575 aa18.95■□□□□ 0.62
PLXNB3-208ENST00000485980 SHROOM1Q2M3G4 852 aaPredicted RBP18.95■□□□□ 0.62
PLXNB3-208ENST00000485980 MORN1Q5T089 497 aa18.95■□□□□ 0.62
PLXNB3-208ENST00000485980 WDR78Q5VTH9 848 aa18.95■□□□□ 0.62
PLXNB3-208ENST00000485980 FAM109BQ6ICB4 259 aaPredicted RBP18.95■□□□□ 0.62
PLXNB3-208ENST00000485980 MAPKAPK5Q8IW41 473 aa18.95■□□□□ 0.62
PLXNB3-208ENST00000485980 TGFBRAP1Q8WUH2 860 aa18.95■□□□□ 0.62
PLXNB3-208ENST00000485980 APBA2Q99767 749 aa18.95■□□□□ 0.62
PLXNB3-208ENST00000485980 AATFQ9NY61 560 aaKnown RBP eCLIP18.95■□□□□ 0.62
PLXNB3-208ENST00000485980 RCAN3Q9UKA8 241 aa18.95■□□□□ 0.62
PLXNB3-208ENST00000485980 NDUFB9Q9Y6M9 179 aa18.95■□□□□ 0.62
PLXNB3-208ENST00000485980 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.95■□□□□ 0.62
PLXNB3-208ENST00000485980 CNGA1P29973 690 aa18.94■□□□□ 0.62
PLXNB3-208ENST00000485980 ATN1P54259 1190 aaPredicted RBP18.94■□□□□ 0.62
PLXNB3-208ENST00000485980 MFSD14CQ5VZR4 134 aa18.94■□□□□ 0.62
PLXNB3-208ENST00000485980 FOXP4Q8IVH2 680 aaPredicted RBP18.94■□□□□ 0.62
PLXNB3-208ENST00000485980 GTF3C2Q8WUA4 911 aaPredicted RBP18.94■□□□□ 0.62
PLXNB3-208ENST00000485980 EDC3Q96F86 508 aaKnown RBP18.94■□□□□ 0.62
PLXNB3-208ENST00000485980 PRKAG2Q9UGJ0 569 aa18.94■□□□□ 0.62
PLXNB3-208ENST00000485980 MS4A1P11836 297 aa18.93■□□□□ 0.62
PLXNB3-208ENST00000485980 MAP2K5Q13163 448 aa18.93■□□□□ 0.62
PLXNB3-208ENST00000485980 ZNF697Q5TEC3 545 aa18.93■□□□□ 0.62
PLXNB3-208ENST00000485980 NAA16Q6N069 864 aaPredicted RBP18.93■□□□□ 0.62
PLXNB3-208ENST00000485980 EMILIN3Q9NT22 766 aa18.93■□□□□ 0.62
PLXNB3-208ENST00000485980 PALD1Q9ULE6 856 aa18.93■□□□□ 0.62
PLXNB3-208ENST00000485980 ZBTB21Q9ULJ3 1066 aa18.93■□□□□ 0.62
PLXNB3-208ENST00000485980 GLRX3O76003 335 aaKnown RBP18.92■□□□□ 0.62
PLXNB3-208ENST00000485980 GNAI3P08754 354 aa18.92■□□□□ 0.62
PLXNB3-208ENST00000485980 PLCG2P16885 1265 aa18.92■□□□□ 0.62
PLXNB3-208ENST00000485980 ARID4AP29374 1257 aaPredicted RBP18.92■□□□□ 0.62
PLXNB3-208ENST00000485980 MCAMP43121 646 aa18.92■□□□□ 0.62
PLXNB3-208ENST00000485980 ZYXQ15942 572 aaKnown RBP18.92■□□□□ 0.62
PLXNB3-208ENST00000485980 USP17L2Q6R6M4 530 aa18.92■□□□□ 0.62
PLXNB3-208ENST00000485980 DNAJC18Q9H819 358 aa18.92■□□□□ 0.62
PLXNB3-208ENST00000485980 SNRKQ9NRH2 765 aa18.92■□□□□ 0.62
PLXNB3-208ENST00000485980 SAP30BPQ9UHR5 308 aaKnown RBP18.92■□□□□ 0.62
PLXNB3-208ENST00000485980 CENPBP07199 599 aaPredicted RBP18.91■□□□□ 0.62
PLXNB3-208ENST00000485980 UQCRFS1P1P0C7P4 283 aa18.91■□□□□ 0.62
PLXNB3-208ENST00000485980 CCNA1P78396 465 aa18.91■□□□□ 0.62
PLXNB3-208ENST00000485980 ATP2B2Q01814 1243 aa18.91■□□□□ 0.62
PLXNB3-208ENST00000485980 POTEEQ6S8J3 1075 aa18.91■□□□□ 0.62
PLXNB3-208ENST00000485980 ITPRIPQ8IWB1 547 aa18.91■□□□□ 0.62
PLXNB3-208ENST00000485980 GINM1Q9NU53 330 aa18.91■□□□□ 0.62
PLXNB3-208ENST00000485980 FLRT1Q9NZU1 646 aa18.91■□□□□ 0.62
PLXNB3-208ENST00000485980 G3BP1Q13283 466 aaKnown RBP eCLIP18.9■□□□□ 0.62
PLXNB3-208ENST00000485980 FEZ1Q99689 392 aa18.9■□□□□ 0.62
PLXNB3-208ENST00000485980 DDX20Q9UHI6 824 aaKnown RBP18.9■□□□□ 0.62
PLXNB3-208ENST00000485980 RABGAP1Q9Y3P9 1069 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms