RNA–Protein interactions for RNA: ENST00000485680.1

SPTA1-207, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-207ENST00000485680 GINM1Q9NU53 330 aa7.13□□□□□ -1.27
SPTA1-207ENST00000485680 FAM170BA6NMN3 283 aa7.12□□□□□ -1.27
SPTA1-207ENST00000485680 CILPO75339 1184 aa7.12□□□□□ -1.27
SPTA1-207ENST00000485680 USP11P51784 963 aa7.12□□□□□ -1.27
SPTA1-207ENST00000485680 SEZ6Q53EL9 994 aa7.12□□□□□ -1.27
SPTA1-207ENST00000485680 CCDC84Q86UT8 332 aaPredicted RBP7.12□□□□□ -1.27
SPTA1-207ENST00000485680 GMLQ99445 158 aa7.12□□□□□ -1.27
SPTA1-207ENST00000485680 KRT82Q9NSB4 513 aa7.12□□□□□ -1.27
SPTA1-207ENST00000485680 ZC3H7BQ9UGR2 993 aaKnown RBP7.12□□□□□ -1.27
SPTA1-207ENST00000485680 PCDHA4Q9UN74 947 aa7.12□□□□□ -1.27
SPTA1-207ENST00000485680 EFR3BQ9Y2G0 817 aa7.12□□□□□ -1.27
SPTA1-207ENST00000485680 EIF4EBP3O60516 100 aaPredicted RBP7.11□□□□□ -1.27
SPTA1-207ENST00000485680 NASPP49321 788 aaPredicted RBP7.11□□□□□ -1.27
SPTA1-207ENST00000485680 INPP5AQ14642 412 aa7.11□□□□□ -1.27
SPTA1-207ENST00000485680 SF3A1Q15459 793 aaKnown RBP7.11□□□□□ -1.27
SPTA1-207ENST00000485680 MCF2L2Q86YR7 1114 aa7.11□□□□□ -1.27
SPTA1-207ENST00000485680 EZH1Q92800 747 aaPredicted RBP7.11□□□□□ -1.27
SPTA1-207ENST00000485680 NKD1Q969G9 470 aa7.11□□□□□ -1.27
SPTA1-207ENST00000485680 DRC1Q96MC2 740 aa7.11□□□□□ -1.27
SPTA1-207ENST00000485680 WDR18Q9BV38 432 aa7.11□□□□□ -1.27
SPTA1-207ENST00000485680 LRRC3Q9BY71 257 aa7.11□□□□□ -1.27
SPTA1-207ENST00000485680 SMARCA4P51532 1647 aa7.11□□□□□ -1.27
SPTA1-207ENST00000485680 FGRP09769 529 aa7.1□□□□□ -1.27
SPTA1-207ENST00000485680 MPP2Q14168 576 aa7.1□□□□□ -1.27
SPTA1-207ENST00000485680 WIPI1Q5MNZ9 446 aaPredicted RBP7.1□□□□□ -1.27
SPTA1-207ENST00000485680 LRFN4Q6PJG9 635 aa7.1□□□□□ -1.27
SPTA1-207ENST00000485680 REC114Q7Z4M0 266 aa7.1□□□□□ -1.27
SPTA1-207ENST00000485680 VPS37DQ86XT2 251 aa7.1□□□□□ -1.27
SPTA1-207ENST00000485680 SLITRK4Q8IW52 837 aa7.1□□□□□ -1.27
SPTA1-207ENST00000485680 C2CD4AQ8NCU7 369 aaPredicted RBP7.1□□□□□ -1.27
SPTA1-207ENST00000485680 DHX38Q92620 1227 aaKnown RBP7.1□□□□□ -1.27
SPTA1-207ENST00000485680 PLPPR2Q96GM1 343 aa7.1□□□□□ -1.27
SPTA1-207ENST00000485680 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.1□□□□□ -1.27
SPTA1-207ENST00000485680 CSADQ9Y600 493 aa7.1□□□□□ -1.27
SPTA1-207ENST00000485680 WIZO95785 1651 aa7.09□□□□□ -1.27
SPTA1-207ENST00000485680 DCDC2CA8MYV0 355 aa7.09□□□□□ -1.27
SPTA1-207ENST00000485680 GRIN3BO60391 1043 aa7.09□□□□□ -1.27
SPTA1-207ENST00000485680 AOC2O75106 756 aa7.09□□□□□ -1.27
SPTA1-207ENST00000485680 FARP2O94887 1054 aaPredicted RBP7.09□□□□□ -1.27
SPTA1-207ENST00000485680 BPNT1O95861 308 aa7.09□□□□□ -1.27
SPTA1-207ENST00000485680 RPL6Q02878 288 aaKnown RBP7.09□□□□□ -1.27
SPTA1-207ENST00000485680 CWF19L2Q2TBE0 894 aaKnown RBP7.09□□□□□ -1.27
SPTA1-207ENST00000485680 KIF4BQ2VIQ3 1234 aa7.09□□□□□ -1.27
SPTA1-207ENST00000485680 EXOSC6Q5RKV6 272 aaKnown RBP7.09□□□□□ -1.27
SPTA1-207ENST00000485680 SCARA3Q6AZY7 606 aa7.09□□□□□ -1.27
SPTA1-207ENST00000485680 WFDC3Q8IUB2 231 aa7.09□□□□□ -1.27
SPTA1-207ENST00000485680 BRMS1Q9HCU9 246 aa7.09□□□□□ -1.27
SPTA1-207ENST00000485680 TOP2AP11388 1531 aaKnown RBP7.09□□□□□ -1.27
SPTA1-207ENST00000485680 UNC13AQ9UPW8 1703 aa7.09□□□□□ -1.27
SPTA1-207ENST00000485680 BIN1O00499 593 aa7.08□□□□□ -1.28
SPTA1-207ENST00000485680 ATP2B1P20020 1258 aa7.08□□□□□ -1.28
SPTA1-207ENST00000485680 MCM4P33991 863 aa7.08□□□□□ -1.28
SPTA1-207ENST00000485680 SOX9P48436 509 aa7.08□□□□□ -1.28
SPTA1-207ENST00000485680 SOX4Q06945 474 aaPredicted RBP7.08□□□□□ -1.28
SPTA1-207ENST00000485680 ZNF792Q3KQV3 632 aa7.08□□□□□ -1.28
SPTA1-207ENST00000485680 DUSP27Q5VZP5 1158 aa7.08□□□□□ -1.28
SPTA1-207ENST00000485680 CCDC81Q6ZN84 652 aa7.08□□□□□ -1.28
SPTA1-207ENST00000485680 BCL7CQ8WUZ0 217 aaPredicted RBP7.08□□□□□ -1.28
SPTA1-207ENST00000485680 SEC16BQ96JE7 1060 aa7.08□□□□□ -1.28
SPTA1-207ENST00000485680 PPT2Q9UMR5 302 aa7.08□□□□□ -1.28
SPTA1-207ENST00000485680 POLR3KQ9Y2Y1 108 aaPredicted RBP7.08□□□□□ -1.28
SPTA1-207ENST00000485680 PCDHGC5Q9Y5F6 944 aa7.08□□□□□ -1.28
SPTA1-207ENST00000485680 ROBO2Q9HCK4 1378 aa7.08□□□□□ -1.28
SPTA1-207ENST00000485680 GFRA2O00451 464 aa7.07□□□□□ -1.28
SPTA1-207ENST00000485680 GTF2F1P35269 517 aaKnown RBP eCLIP7.07□□□□□ -1.28
SPTA1-207ENST00000485680 CLCQ05315 142 aa7.07□□□□□ -1.28
SPTA1-207ENST00000485680 AKAP4Q5JQC9 854 aa7.07□□□□□ -1.28
SPTA1-207ENST00000485680 GK5Q6ZS86 529 aa7.07□□□□□ -1.28
SPTA1-207ENST00000485680 SPRED2Q7Z698 418 aa7.07□□□□□ -1.28
SPTA1-207ENST00000485680 C12orf40Q86WS4 652 aa7.07□□□□□ -1.28
SPTA1-207ENST00000485680 SPATA32Q96LK8 384 aa7.07□□□□□ -1.28
SPTA1-207ENST00000485680 RAD18Q9NS91 495 aa7.07□□□□□ -1.28
SPTA1-207ENST00000485680 PPP1R9AQ9ULJ8 1098 aa7.07□□□□□ -1.28
SPTA1-207ENST00000485680 SLC5A6Q9Y289 635 aa7.07□□□□□ -1.28
SPTA1-207ENST00000485680 PLCL1Q15111 1095 aa7.06□□□□□ -1.28
SPTA1-207ENST00000485680 ZC3H12AQ5D1E8 599 aaKnown RBP7.06□□□□□ -1.28
SPTA1-207ENST00000485680 HP1BP3Q5SSJ5 553 aaPredicted RBP7.06□□□□□ -1.28
SPTA1-207ENST00000485680 LCE5AQ5TCM9 118 aa7.06□□□□□ -1.28
SPTA1-207ENST00000485680 ZNF574Q6ZN55 896 aaPredicted RBP7.06□□□□□ -1.28
SPTA1-207ENST00000485680 ELMO3Q96BJ8 720 aa7.06□□□□□ -1.28
SPTA1-207ENST00000485680 LRRC4CQ9HCJ2 640 aa7.06□□□□□ -1.28
SPTA1-207ENST00000485680 CORINQ9Y5Q5 1042 aa7.06□□□□□ -1.28
SPTA1-207ENST00000485680 MRVI1Q9Y6F6 885 aa7.06□□□□□ -1.28
SPTA1-207ENST00000485680 BICRAQ9NZM4 1560 aa7.06□□□□□ -1.28
SPTA1-207ENST00000485680 PRAMEF27A3QJZ7 478 aa7.05□□□□□ -1.28
SPTA1-207ENST00000485680 TMPRSS2O15393 492 aa7.05□□□□□ -1.28
SPTA1-207ENST00000485680 DIEXFQ68CQ4 756 aaKnown RBP7.05□□□□□ -1.28
SPTA1-207ENST00000485680 ZNF765Q7L2R6 523 aa7.05□□□□□ -1.28
SPTA1-207ENST00000485680 HDXQ7Z353 690 aa7.05□□□□□ -1.28
SPTA1-207ENST00000485680 ATG4DQ86TL0 474 aaPredicted RBP7.05□□□□□ -1.28
SPTA1-207ENST00000485680 UBXN4Q92575 508 aa7.05□□□□□ -1.28
SPTA1-207ENST00000485680 DNAJC2Q99543 621 aaKnown RBP7.05□□□□□ -1.28
SPTA1-207ENST00000485680 YIPF2Q9BWQ6 316 aa7.05□□□□□ -1.28
SPTA1-207ENST00000485680 AP4E1Q9UPM8 1137 aa7.05□□□□□ -1.28
SPTA1-207ENST00000485680 PCDHB14Q9Y5E9 798 aa7.05□□□□□ -1.28
SPTA1-207ENST00000485680 SSBP05455 408 aaKnown RBP eCLIP7.04□□□□□ -1.28
SPTA1-207ENST00000485680 SLFN14P0C7P3 912 aa7.04□□□□□ -1.28
SPTA1-207ENST00000485680 ADH5P11766 374 aa7.04□□□□□ -1.28
SPTA1-207ENST00000485680 ZNF165P49910 485 aa7.04□□□□□ -1.28
SPTA1-207ENST00000485680 CYP27A1Q02318 531 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms