RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 FTSJ3Q8IY81 847 aaKnown RBP13.01□□□□□ -0.33
HMGN1-215ENST00000485550 FAM163AQ96GL9 167 aaPredicted RBP13.01□□□□□ -0.33
HMGN1-215ENST00000485550 SLC45A1Q9Y2W3 748 aa13.01□□□□□ -0.33
HMGN1-215ENST00000485550 MROH7-TTC4A0A0A0MT08 1334 aa13.01□□□□□ -0.33
HMGN1-215ENST00000485550 ATRNL1Q5VV63 1379 aa13.01□□□□□ -0.33
HMGN1-215ENST00000485550 PDS5AQ29RF7 1337 aaKnown RBP13□□□□□ -0.33
HMGN1-215ENST00000485550 RPTORQ8N122 1335 aa13□□□□□ -0.33
HMGN1-215ENST00000485550 GPR75-ASB3A0A0A6YYF3 556 aa13□□□□□ -0.33
HMGN1-215ENST00000485550 SURF6O75683 361 aaKnown RBP13□□□□□ -0.33
HMGN1-215ENST00000485550 RLBP1P12271 317 aa13□□□□□ -0.33
HMGN1-215ENST00000485550 MCAMP43121 646 aa13□□□□□ -0.33
HMGN1-215ENST00000485550 RHBDL3P58872 404 aa13□□□□□ -0.33
HMGN1-215ENST00000485550 TREML2Q5T2D2 321 aa13□□□□□ -0.33
HMGN1-215ENST00000485550 NSUN4Q96CB9 384 aaKnown RBP13□□□□□ -0.33
HMGN1-215ENST00000485550 HMX1Q9NP08 348 aaPredicted RBP13□□□□□ -0.33
HMGN1-215ENST00000485550 LRP2BPQ9P2M1 347 aa13□□□□□ -0.33
HMGN1-215ENST00000485550 PFASO15067 1338 aa12.99□□□□□ -0.33
HMGN1-215ENST00000485550 FAM196BA6NMK8 535 aa12.99□□□□□ -0.33
HMGN1-215ENST00000485550 ARID4AP29374 1257 aaPredicted RBP12.99□□□□□ -0.33
HMGN1-215ENST00000485550 FAM110CQ1W6H9 321 aa12.99□□□□□ -0.33
HMGN1-215ENST00000485550 TNNI3KQ59H18 835 aa12.99□□□□□ -0.33
HMGN1-215ENST00000485550 TTC39AQ5SRH9 613 aa12.99□□□□□ -0.33
HMGN1-215ENST00000485550 FAM161BQ96MY7 647 aa12.99□□□□□ -0.33
HMGN1-215ENST00000485550 GUCD1Q96NT3 240 aa12.99□□□□□ -0.33
HMGN1-215ENST00000485550 DBNDD2Q9BQY9 259 aa12.99□□□□□ -0.33
HMGN1-215ENST00000485550 AGTPBP1Q9UPW5 1226 aa12.99□□□□□ -0.33
HMGN1-215ENST00000485550 FPGT-TNNI3KV9GXZ4 949 aa12.99□□□□□ -0.33
HMGN1-215ENST00000485550 LAMA2P24043 3122 aaKnown RBP12.98□□□□□ -0.33
HMGN1-215ENST00000485550 LDHCP07864 332 aa12.98□□□□□ -0.33
HMGN1-215ENST00000485550 UQCRFS1P1P0C7P4 283 aa12.98□□□□□ -0.33
HMGN1-215ENST00000485550 GSTO1P78417 241 aa12.98□□□□□ -0.33
HMGN1-215ENST00000485550 MDM2Q00987 491 aaPredicted RBP12.98□□□□□ -0.33
HMGN1-215ENST00000485550 CCDC158Q5M9N0 1113 aa12.98□□□□□ -0.33
HMGN1-215ENST00000485550 SSH3Q8TE77 659 aa12.98□□□□□ -0.33
HMGN1-215ENST00000485550 VCANP13611 3396 aa12.98□□□□□ -0.33
HMGN1-215ENST00000485550 MAST2Q6P0Q8 1798 aa12.97□□□□□ -0.33
HMGN1-215ENST00000485550 CTNND1O60716 968 aaKnown RBP12.97□□□□□ -0.33
HMGN1-215ENST00000485550 TRIB2Q92519 343 aa12.97□□□□□ -0.33
HMGN1-215ENST00000485550 CCDC8Q9H0W5 538 aaPredicted RBP12.97□□□□□ -0.33
HMGN1-215ENST00000485550 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.97□□□□□ -0.33
HMGN1-215ENST00000485550 GJD2Q9UKL4 321 aa12.97□□□□□ -0.33
HMGN1-215ENST00000485550 PNMA3Q9UL41 463 aa12.97□□□□□ -0.33
HMGN1-215ENST00000485550 OGDHLQ9ULD0 1010 aa12.97□□□□□ -0.33
HMGN1-215ENST00000485550 RFX7Q2KHR2 1363 aa12.96□□□□□ -0.33
HMGN1-215ENST00000485550 DNAH12Q6ZR08 3092 aa12.96□□□□□ -0.33
HMGN1-215ENST00000485550 MYO9BQ13459 2157 aa12.96□□□□□ -0.33
HMGN1-215ENST00000485550 CDK5RAP2Q96SN8 1893 aa12.96□□□□□ -0.33
HMGN1-215ENST00000485550 CYP2B6P20813 491 aa12.96□□□□□ -0.33
HMGN1-215ENST00000485550 MAP3K10Q02779 954 aa12.96□□□□□ -0.33
HMGN1-215ENST00000485550 TEX11Q8IYF3 940 aa12.96□□□□□ -0.33
HMGN1-215ENST00000485550 PANK1Q8TE04 598 aa12.96□□□□□ -0.33
HMGN1-215ENST00000485550 SH3RF3Q8TEJ3 882 aaPredicted RBP12.96□□□□□ -0.33
HMGN1-215ENST00000485550 GPR108Q9NPR9 543 aa12.96□□□□□ -0.33
HMGN1-215ENST00000485550 AATFQ9NY61 560 aaKnown RBP eCLIP12.96□□□□□ -0.33
HMGN1-215ENST00000485550 LTBP2Q14767 1821 aa12.96□□□□□ -0.33
HMGN1-215ENST00000485550 EYSQ5T1H1 3165 aa12.96□□□□□ -0.33
HMGN1-215ENST00000485550 POTEB2H3BUK9 544 aa12.95□□□□□ -0.34
HMGN1-215ENST00000485550 PEX10O60683 326 aa12.95□□□□□ -0.34
HMGN1-215ENST00000485550 CYP2E1P05181 493 aaPredicted RBP12.95□□□□□ -0.34
HMGN1-215ENST00000485550 ZAP70P43403 619 aa12.95□□□□□ -0.34
HMGN1-215ENST00000485550 SPP2Q13103 211 aa12.95□□□□□ -0.34
HMGN1-215ENST00000485550 LRRC26Q2I0M4 334 aa12.95□□□□□ -0.34
HMGN1-215ENST00000485550 NAA16Q6N069 864 aaPredicted RBP12.95□□□□□ -0.34
HMGN1-215ENST00000485550 NOL10Q9BSC4 688 aaKnown RBP12.95□□□□□ -0.34
HMGN1-215ENST00000485550 OSBPL5Q9H0X9 879 aaPredicted RBP12.95□□□□□ -0.34
HMGN1-215ENST00000485550 TSPYL2Q9H2G4 693 aaPredicted RBP12.95□□□□□ -0.34
HMGN1-215ENST00000485550 TLR7Q9NYK1 1049 aaKnown RBP12.95□□□□□ -0.34
HMGN1-215ENST00000485550 PRUNE2Q8WUY3 3088 aa12.95□□□□□ -0.34
HMGN1-215ENST00000485550 GCLCP48506 637 aaPredicted RBP12.94□□□□□ -0.34
HMGN1-215ENST00000485550 HMGCS2P54868 508 aa12.94□□□□□ -0.34
HMGN1-215ENST00000485550 RRP1BQ14684 758 aaKnown RBP12.94□□□□□ -0.34
HMGN1-215ENST00000485550 ADGRA1Q86SQ6 560 aa12.94□□□□□ -0.34
HMGN1-215ENST00000485550 MAPKAPK5Q8IW41 473 aa12.94□□□□□ -0.34
HMGN1-215ENST00000485550 PROCA1Q8NCQ7 364 aaPredicted RBP12.94□□□□□ -0.34
HMGN1-215ENST00000485550 TGFBRAP1Q8WUH2 860 aa12.94□□□□□ -0.34
HMGN1-215ENST00000485550 EAF2Q96CJ1 260 aaPredicted RBP12.94□□□□□ -0.34
HMGN1-215ENST00000485550 BCL11AQ9H165 835 aa12.94□□□□□ -0.34
HMGN1-215ENST00000485550 ASCC2Q9H1I8 757 aaPredicted RBP12.94□□□□□ -0.34
HMGN1-215ENST00000485550 PIH1D3Q9NQM4 214 aaKnown RBP12.94□□□□□ -0.34
HMGN1-215ENST00000485550 DBNLQ9UJU6 430 aaKnown RBP12.94□□□□□ -0.34
HMGN1-215ENST00000485550 NOP58Q9Y2X3 529 aaKnown RBP12.94□□□□□ -0.34
HMGN1-215ENST00000485550 TTC28Q96AY4 2481 aa12.94□□□□□ -0.34
HMGN1-215ENST00000485550 SIPA1L1O43166 1804 aa12.93□□□□□ -0.34
HMGN1-215ENST00000485550 COL2A1P02458 1487 aaPredicted RBP12.93□□□□□ -0.34
HMGN1-215ENST00000485550 TBC1D12O60347 775 aa12.93□□□□□ -0.34
HMGN1-215ENST00000485550 BAG3O95817 575 aa12.93□□□□□ -0.34
HMGN1-215ENST00000485550 CEP85Q6P2H3 762 aa12.93□□□□□ -0.34
HMGN1-215ENST00000485550 MS4A3Q96HJ5 214 aa12.93□□□□□ -0.34
HMGN1-215ENST00000485550 EXOC6BQ9Y2D4 811 aa12.93□□□□□ -0.34
HMGN1-215ENST00000485550 NDUFB9Q9Y6M9 179 aa12.93□□□□□ -0.34
HMGN1-215ENST00000485550 RLFQ13129 1914 aa12.93□□□□□ -0.34
HMGN1-215ENST00000485550 MAP4K4O95819 1239 aaPredicted RBP12.92□□□□□ -0.34
HMGN1-215ENST00000485550 COL6A1P12109 1028 aa12.92□□□□□ -0.34
HMGN1-215ENST00000485550 CCND3P30281 292 aaPredicted RBP12.92□□□□□ -0.34
HMGN1-215ENST00000485550 DYNLL1P63167 89 aaKnown RBP12.92□□□□□ -0.34
HMGN1-215ENST00000485550 MAP3K21Q5TCX8 1036 aa12.92□□□□□ -0.34
HMGN1-215ENST00000485550 ZNF697Q5TEC3 545 aa12.92□□□□□ -0.34
HMGN1-215ENST00000485550 FAM109BQ6ICB4 259 aaPredicted RBP12.92□□□□□ -0.34
HMGN1-215ENST00000485550 ZNF280CQ8ND82 737 aa12.92□□□□□ -0.34
HMGN1-215ENST00000485550 NUDT12Q9BQG2 462 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms