RNA–Protein interactions for RNA: ENST00000485541.1

SRRM1-214, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-214ENST00000485541 ZSCAN10Q96SZ4 725 aaPredicted RBP9.19□□□□□ -0.94
SRRM1-214ENST00000485541 EYA3Q99504 573 aa9.19□□□□□ -0.94
SRRM1-214ENST00000485541 NUP62CLQ9H1M0 184 aa9.19□□□□□ -0.94
SRRM1-214ENST00000485541 TCP11L1Q9NUJ3 509 aa9.19□□□□□ -0.94
SRRM1-214ENST00000485541 MKRN1Q9UHC7 482 aaKnown RBP9.19□□□□□ -0.94
SRRM1-214ENST00000485541 NSFL1CQ9UNZ2 370 aaKnown RBP9.19□□□□□ -0.94
SRRM1-214ENST00000485541 TNKSO95271 1327 aa9.19□□□□□ -0.94
SRRM1-214ENST00000485541 GPR75-ASB3A0A0A6YYF3 556 aa9.18□□□□□ -0.94
SRRM1-214ENST00000485541 POTEFA5A3E0 1075 aa9.18□□□□□ -0.94
SRRM1-214ENST00000485541 MINDY4BA8MYZ0 360 aa9.18□□□□□ -0.94
SRRM1-214ENST00000485541 USP17L12C9JPN9 530 aa9.18□□□□□ -0.94
SRRM1-214ENST00000485541 USP17L21D6R901 530 aa9.18□□□□□ -0.94
SRRM1-214ENST00000485541 CCDC192P0DO97 292 aa9.18□□□□□ -0.94
SRRM1-214ENST00000485541 U2AF2P26368 475 aaKnown RBP eCLIP9.18□□□□□ -0.942e-10■□□□□ 10
SRRM1-214ENST00000485541 DYNLL1P63167 89 aaKnown RBP9.18□□□□□ -0.94
SRRM1-214ENST00000485541 KIF23Q02241 960 aaPredicted RBP9.18□□□□□ -0.94
SRRM1-214ENST00000485541 SAFBQ15424 915 aaKnown RBP eCLIP9.18□□□□□ -0.94
SRRM1-214ENST00000485541 MAP3K11Q16584 847 aa9.18□□□□□ -0.94
SRRM1-214ENST00000485541 C12orf60Q5U649 245 aa9.18□□□□□ -0.94
SRRM1-214ENST00000485541 MYSM1Q5VVJ2 828 aa9.18□□□□□ -0.94
SRRM1-214ENST00000485541 CATIPQ7Z7H3 387 aa9.18□□□□□ -0.94
SRRM1-214ENST00000485541 DGKHQ86XP1 1220 aa9.18□□□□□ -0.94
SRRM1-214ENST00000485541 FANCBQ8NB91 859 aa9.18□□□□□ -0.94
SRRM1-214ENST00000485541 MYO3BQ8WXR4 1341 aa9.18□□□□□ -0.94
SRRM1-214ENST00000485541 CHAMP1Q96JM3 812 aa9.18□□□□□ -0.94
SRRM1-214ENST00000485541 ALG1Q9BT22 464 aa9.18□□□□□ -0.94
SRRM1-214ENST00000485541 GPHNQ9NQX3 736 aaPredicted RBP9.18□□□□□ -0.94
SRRM1-214ENST00000485541 TOMM22Q9NS69 142 aa9.18□□□□□ -0.94
SRRM1-214ENST00000485541 FAM217BQ9NTX9 383 aaPredicted RBP9.18□□□□□ -0.94
SRRM1-214ENST00000485541 AATFQ9NY61 560 aaKnown RBP eCLIP9.18□□□□□ -0.94
SRRM1-214ENST00000485541 SCN9AQ15858 1988 aa9.17□□□□□ -0.94
SRRM1-214ENST00000485541 MAP3K13O43283 966 aa9.17□□□□□ -0.94
SRRM1-214ENST00000485541 PPP6R2O75170 966 aa9.17□□□□□ -0.94
SRRM1-214ENST00000485541 ECM2O94769 699 aaPredicted RBP9.17□□□□□ -0.94
SRRM1-214ENST00000485541 CDC27P30260 824 aa9.17□□□□□ -0.94
SRRM1-214ENST00000485541 USP5P45974 858 aa9.17□□□□□ -0.94
SRRM1-214ENST00000485541 GNAQP50148 359 aa9.17□□□□□ -0.94
SRRM1-214ENST00000485541 FOXD4L6Q3SYB3 417 aaPredicted RBP9.17□□□□□ -0.94
SRRM1-214ENST00000485541 RRP12Q5JTH9 1297 aaKnown RBP9.17□□□□□ -0.94
SRRM1-214ENST00000485541 IFIT1BQ5T764 474 aaKnown RBP9.17□□□□□ -0.94
SRRM1-214ENST00000485541 ADALQ6DHV7 355 aa9.17□□□□□ -0.94
SRRM1-214ENST00000485541 FOXD4L3Q6VB84 417 aaPredicted RBP9.17□□□□□ -0.94
SRRM1-214ENST00000485541 CCDC24Q8N4L8 307 aa9.17□□□□□ -0.94
SRRM1-214ENST00000485541 PDLIM2Q96JY6 352 aa9.17□□□□□ -0.94
SRRM1-214ENST00000485541 FUCA2Q9BTY2 467 aa9.17□□□□□ -0.94
SRRM1-214ENST00000485541 MRIQ9BWK5 157 aa9.17□□□□□ -0.94
SRRM1-214ENST00000485541 RTFDC1Q9BY42 306 aaPredicted RBP9.17□□□□□ -0.94
SRRM1-214ENST00000485541 FOXP1Q9H334 677 aaPredicted RBP9.17□□□□□ -0.94
SRRM1-214ENST00000485541 CLSTN2Q9H4D0 955 aa9.17□□□□□ -0.94
SRRM1-214ENST00000485541 ARFGEF1Q9Y6D6 1849 aa9.17□□□□□ -0.94
SRRM1-214ENST00000485541 PLIN4Q96Q06 1357 aa9.16□□□□□ -0.94
SRRM1-214ENST00000485541 WTIPA6NIX2 430 aaPredicted RBP9.16□□□□□ -0.94
SRRM1-214ENST00000485541 PRPF3O43395 683 aaKnown RBP9.16□□□□□ -0.94
SRRM1-214ENST00000485541 MMP10P09238 476 aa9.16□□□□□ -0.94
SRRM1-214ENST00000485541 KIF5BP33176 963 aa9.16□□□□□ -0.94
SRRM1-214ENST00000485541 AKAP17AQ02040 695 aaKnown RBP9.16□□□□□ -0.94
SRRM1-214ENST00000485541 FAM160A1Q05DH4 1040 aa9.16□□□□□ -0.94
SRRM1-214ENST00000485541 PPP4R3BQ5MIZ7 849 aa9.16□□□□□ -0.94
SRRM1-214ENST00000485541 MFSD14BQ5SR56 506 aa9.16□□□□□ -0.94
SRRM1-214ENST00000485541 KRT40Q6A162 431 aa9.16□□□□□ -0.94
SRRM1-214ENST00000485541 CCDC73Q6ZRK6 1079 aa9.16□□□□□ -0.94
SRRM1-214ENST00000485541 PODNQ7Z5L7 613 aa9.16□□□□□ -0.94
SRRM1-214ENST00000485541 CRACR2BQ8N4Y2 399 aaPredicted RBP9.16□□□□□ -0.94
SRRM1-214ENST00000485541 MPNDQ8N594 471 aa9.16□□□□□ -0.94
SRRM1-214ENST00000485541 ENAHQ8N8S7 591 aaPredicted RBP9.16□□□□□ -0.94
SRRM1-214ENST00000485541 LINC00301Q8NCQ3 95 aa9.16□□□□□ -0.94
SRRM1-214ENST00000485541 BICD2Q8TD16 824 aa9.16□□□□□ -0.94
SRRM1-214ENST00000485541 CNKSR1Q969H4 720 aa9.16□□□□□ -0.94
SRRM1-214ENST00000485541 USP28Q96RU2 1077 aa9.16□□□□□ -0.94
SRRM1-214ENST00000485541 ZC3H12CQ9C0D7 883 aaKnown RBP9.16□□□□□ -0.94
SRRM1-214ENST00000485541 TNMDQ9H2S6 317 aa9.16□□□□□ -0.94
SRRM1-214ENST00000485541 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.16□□□□□ -0.94
SRRM1-214ENST00000485541 BMP2KQ9NSY1 1161 aaPredicted RBP9.16□□□□□ -0.94
SRRM1-214ENST00000485541 POLLQ9UGP5 575 aa9.16□□□□□ -0.94
SRRM1-214ENST00000485541 TACC3Q9Y6A5 838 aa9.16□□□□□ -0.94
SRRM1-214ENST00000485541 BRCA1P38398 1863 aaKnown RBP9.16□□□□□ -0.94
SRRM1-214ENST00000485541 BAZ2BQ9UIF8 2168 aaKnown RBP9.15□□□□□ -0.94
SRRM1-214ENST00000485541 C6orf229H3BNL8 230 aa9.15□□□□□ -0.94
SRRM1-214ENST00000485541 RANBP6O60518 1105 aaKnown RBP9.15□□□□□ -0.94
SRRM1-214ENST00000485541 BMP15O95972 392 aa9.15□□□□□ -0.94
SRRM1-214ENST00000485541 MMP1P03956 469 aa9.15□□□□□ -0.94
SRRM1-214ENST00000485541 HDLBPQ00341 1268 aaKnown RBP9.15□□□□□ -0.94
SRRM1-214ENST00000485541 TROAPQ12815 778 aa9.15□□□□□ -0.94
SRRM1-214ENST00000485541 STK38Q15208 465 aa9.15□□□□□ -0.94
SRRM1-214ENST00000485541 RILPL1Q5EBL4 403 aa9.15□□□□□ -0.94
SRRM1-214ENST00000485541 ANO1Q5XXA6 986 aa9.15□□□□□ -0.94
SRRM1-214ENST00000485541 FAM173BQ6P4H8 233 aa9.15□□□□□ -0.94
SRRM1-214ENST00000485541 ILDR1Q86SU0 546 aaPredicted RBP9.15□□□□□ -0.94
SRRM1-214ENST00000485541 NBPF11Q86T75 865 aa9.15□□□□□ -0.94
SRRM1-214ENST00000485541 FAM43AQ8N2R8 423 aa9.15□□□□□ -0.94
SRRM1-214ENST00000485541 CTCFLQ8NI51 663 aaPredicted RBP9.15□□□□□ -0.94
SRRM1-214ENST00000485541 MRPS27Q92552 414 aaKnown RBP9.15□□□□□ -0.94
SRRM1-214ENST00000485541 TRIM44Q96DX7 344 aaPredicted RBP9.15□□□□□ -0.94
SRRM1-214ENST00000485541 PGBD1Q96JS3 809 aa9.15□□□□□ -0.94
SRRM1-214ENST00000485541 RBSNQ9H1K0 784 aa9.15□□□□□ -0.94
SRRM1-214ENST00000485541 MCM9Q9NXL9 1143 aa9.15□□□□□ -0.94
SRRM1-214ENST00000485541 STK32BQ9NY57 414 aa9.15□□□□□ -0.94
SRRM1-214ENST00000485541 TFIP11Q9UBB9 837 aaKnown RBP9.15□□□□□ -0.94
SRRM1-214ENST00000485541 TRPC6Q9Y210 931 aa9.15□□□□□ -0.94
SRRM1-214ENST00000485541 COL2A1P02458 1487 aaPredicted RBP9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms