RNA–Protein interactions for RNA: ENST00000485091.5

CCDC78-214, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-214ENST00000485091 ZSCAN10Q96SZ4 725 aaPredicted RBP20.54■□□□□ 0.88
CCDC78-214ENST00000485091 KLF18A0A0U1RQI7 1052 aa20.53■□□□□ 0.88
CCDC78-214ENST00000485091 DTNBO60941 627 aa20.53■□□□□ 0.88
CCDC78-214ENST00000485091 TNNI2P48788 182 aa20.53■□□□□ 0.88
CCDC78-214ENST00000485091 HIRAP54198 1017 aaPredicted RBP20.53■□□□□ 0.88
CCDC78-214ENST00000485091 FKBP1CQ5VVH2 108 aa20.53■□□□□ 0.88
CCDC78-214ENST00000485091 CDAN1Q8IWY9 1227 aa20.53■□□□□ 0.88
CCDC78-214ENST00000485091 LY9Q9HBG7 655 aa20.53■□□□□ 0.88
CCDC78-214ENST00000485091 SH2B1Q9NRF2 756 aaPredicted RBP20.53■□□□□ 0.88
CCDC78-214ENST00000485091 SWAP70Q9UH65 585 aa20.53■□□□□ 0.88
CCDC78-214ENST00000485091 BRPF3Q9ULD4 1205 aa20.53■□□□□ 0.88
CCDC78-214ENST00000485091 RASA3Q14644 834 aa20.53■□□□□ 0.88
CCDC78-214ENST00000485091 ANGEL2Q5VTE6 544 aaKnown RBP20.53■□□□□ 0.88
CCDC78-214ENST00000485091 FAM83AQ86UY5 434 aa20.53■□□□□ 0.88
CCDC78-214ENST00000485091 FBXL16Q8N461 479 aa20.53■□□□□ 0.88
CCDC78-214ENST00000485091 ZNF784Q8NCA9 323 aaPredicted RBP20.53■□□□□ 0.88
CCDC78-214ENST00000485091 EHD4Q9H223 541 aa20.53■□□□□ 0.88
CCDC78-214ENST00000485091 ATRNL1Q5VV63 1379 aa20.52■□□□□ 0.88
CCDC78-214ENST00000485091 CCDC69A6NI79 296 aa20.52■□□□□ 0.88
CCDC78-214ENST00000485091 CCT2P78371 535 aaKnown RBP20.52■□□□□ 0.88
CCDC78-214ENST00000485091 FOXP4Q8IVH2 680 aaPredicted RBP20.52■□□□□ 0.88
CCDC78-214ENST00000485091 DNAJC18Q9H819 358 aa20.52■□□□□ 0.88
CCDC78-214ENST00000485091 ADARB2Q9NS39 739 aaKnown RBP20.52■□□□□ 0.88
CCDC78-214ENST00000485091 GLTPD2A6NH11 291 aa20.51■□□□□ 0.87
CCDC78-214ENST00000485091 PDIA3P30101 505 aaKnown RBP20.51■□□□□ 0.87
CCDC78-214ENST00000485091 SHMT1P34896 483 aa20.51■□□□□ 0.87
CCDC78-214ENST00000485091 CUL4AQ13619 759 aa20.51■□□□□ 0.87
CCDC78-214ENST00000485091 ENAHQ8N8S7 591 aaPredicted RBP20.51■□□□□ 0.87
CCDC78-214ENST00000485091 SIPA1L1O43166 1804 aa20.51■□□□□ 0.87
CCDC78-214ENST00000485091 LIFRP42702 1097 aa20.5■□□□□ 0.87
CCDC78-214ENST00000485091 ST3GAL1Q11201 340 aa20.5■□□□□ 0.87
CCDC78-214ENST00000485091 TNFAIP1Q13829 316 aa20.5■□□□□ 0.87
CCDC78-214ENST00000485091 MYL10Q9BUA6 226 aa20.5■□□□□ 0.87
CCDC78-214ENST00000485091 GGA3Q9NZ52 723 aa20.5■□□□□ 0.87
CCDC78-214ENST00000485091 ZC3H4Q9UPT8 1303 aaKnown RBP20.5■□□□□ 0.87
CCDC78-214ENST00000485091 COL2A1P02458 1487 aaPredicted RBP20.5■□□□□ 0.87
CCDC78-214ENST00000485091 GOLGA8BA8MQT2 603 aa20.5■□□□□ 0.87
CCDC78-214ENST00000485091 MPHOSPH10O00566 681 aaKnown RBP20.5■□□□□ 0.87
CCDC78-214ENST00000485091 AKR1B1P15121 316 aa20.5■□□□□ 0.87
CCDC78-214ENST00000485091 RXRAP19793 462 aa20.5■□□□□ 0.87
CCDC78-214ENST00000485091 SEC23AQ15436 765 aa20.5■□□□□ 0.87
CCDC78-214ENST00000485091 IFIT1BQ5T764 474 aaKnown RBP20.5■□□□□ 0.87
CCDC78-214ENST00000485091 ZNF274Q96GC6 653 aaPredicted RBP20.5■□□□□ 0.87
CCDC78-214ENST00000485091 MTA3Q9BTC8 594 aa20.5■□□□□ 0.87
CCDC78-214ENST00000485091 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.5■□□□□ 0.87
CCDC78-214ENST00000485091 IL17RBQ9NRM6 502 aa20.5■□□□□ 0.87
CCDC78-214ENST00000485091 SCRN1Q12765 414 aa20.49■□□□□ 0.87
CCDC78-214ENST00000485091 MIGA2Q7L4E1 593 aa20.49■□□□□ 0.87
CCDC78-214ENST00000485091 DEFB129Q9H1M3 183 aa20.49■□□□□ 0.87
CCDC78-214ENST00000485091 SLC12A7Q9Y666 1083 aa20.49■□□□□ 0.87
CCDC78-214ENST00000485091 PFKFB2O60825 505 aa20.48■□□□□ 0.87
CCDC78-214ENST00000485091 SYNE3Q6ZMZ3 975 aa20.48■□□□□ 0.87
CCDC78-214ENST00000485091 SGMS1Q86VZ5 419 aa20.48■□□□□ 0.87
CCDC78-214ENST00000485091 MICU3Q86XE3 530 aa20.48■□□□□ 0.87
CCDC78-214ENST00000485091 CCDC144CPQ8IYA2 1237 aa20.48■□□□□ 0.87
CCDC78-214ENST00000485091 NEDD1Q8NHV4 660 aa20.48■□□□□ 0.87
CCDC78-214ENST00000485091 GTF3C6Q969F1 213 aa20.48■□□□□ 0.87
CCDC78-214ENST00000485091 L3MBTL3Q96JM7 780 aaPredicted RBP20.48■□□□□ 0.87
CCDC78-214ENST00000485091 NCOA5Q9HCD5 579 aaKnown RBP20.48■□□□□ 0.87
CCDC78-214ENST00000485091 EVCP57679 992 aa20.47■□□□□ 0.87
CCDC78-214ENST00000485091 CERKLQ49MI3 558 aaPredicted RBP20.47■□□□□ 0.87
CCDC78-214ENST00000485091 PRAMEF18Q5VWM3 479 aa20.47■□□□□ 0.87
CCDC78-214ENST00000485091 APOA5Q6Q788 366 aa20.47■□□□□ 0.87
CCDC78-214ENST00000485091 APOBEC3FQ8IUX4 373 aaKnown RBP20.47■□□□□ 0.87
CCDC78-214ENST00000485091 TMTC2Q8N394 836 aa20.47■□□□□ 0.87
CCDC78-214ENST00000485091 ZBTB43O43298 467 aa20.47■□□□□ 0.87
CCDC78-214ENST00000485091 GDF11O95390 407 aa20.47■□□□□ 0.87
CCDC78-214ENST00000485091 EPHX2P34913 555 aa20.47■□□□□ 0.87
CCDC78-214ENST00000485091 NT5C2P49902 561 aa20.47■□□□□ 0.87
CCDC78-214ENST00000485091 SHROOM1Q2M3G4 852 aaPredicted RBP20.47■□□□□ 0.87
CCDC78-214ENST00000485091 NUP133Q8WUM0 1156 aa20.47■□□□□ 0.87
CCDC78-214ENST00000485091 PGAP2Q9UHJ9 254 aa20.47■□□□□ 0.87
CCDC78-214ENST00000485091 STX8Q9UNK0 236 aa20.47■□□□□ 0.87
CCDC78-214ENST00000485091 HPS5Q9UPZ3 1129 aa20.47■□□□□ 0.87
CCDC78-214ENST00000485091 TATDN1Q6P1N9 297 aa20.46■□□□□ 0.87
CCDC78-214ENST00000485091 METTL16Q86W50 562 aaKnown RBP20.46■□□□□ 0.87
CCDC78-214ENST00000485091 CEP95Q96GE4 821 aa20.46■□□□□ 0.87
CCDC78-214ENST00000485091 TEPSINQ96N21 525 aa20.46■□□□□ 0.87
CCDC78-214ENST00000485091 TCP11L1Q9NUJ3 509 aa20.46■□□□□ 0.87
CCDC78-214ENST00000485091 HERC5Q9UII4 1024 aaKnown RBP20.46■□□□□ 0.87
CCDC78-214ENST00000485091 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.46■□□□□ 0.87
CCDC78-214ENST00000485091 MYH8P13535 1937 aa20.46■□□□□ 0.87
CCDC78-214ENST00000485091 METAP2P50579 478 aaKnown RBP eCLIP20.45■□□□□ 0.86
CCDC78-214ENST00000485091 EAPPQ56P03 285 aaPredicted RBP20.45■□□□□ 0.86
CCDC78-214ENST00000485091 RCSD1Q6JBY9 416 aa20.45■□□□□ 0.86
CCDC78-214ENST00000485091 ZNF654Q8IZM8 581 aa20.45■□□□□ 0.86
CCDC78-214ENST00000485091 CHMP4CQ96CF2 233 aa20.45■□□□□ 0.86
CCDC78-214ENST00000485091 INTS4Q96HW7 963 aaKnown RBP20.45■□□□□ 0.86
CCDC78-214ENST00000485091 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.45■□□□□ 0.86
CCDC78-214ENST00000485091 SMC3Q9UQE7 1217 aa20.45■□□□□ 0.86
CCDC78-214ENST00000485091 GOLGA8AA7E2F4 631 aa20.44■□□□□ 0.86
CCDC78-214ENST00000485091 PPFIA3O75145 1194 aa20.44■□□□□ 0.86
CCDC78-214ENST00000485091 CCDC178Q5BJE1 867 aa20.44■□□□□ 0.86
CCDC78-214ENST00000485091 NBPF12Q5TAG4 269 aaPredicted RBP20.44■□□□□ 0.86
CCDC78-214ENST00000485091 CLEC10AQ8IUN9 316 aa20.44■□□□□ 0.86
CCDC78-214ENST00000485091 CCDC17Q96LX7 622 aa20.44■□□□□ 0.86
CCDC78-214ENST00000485091 KAT14Q9H8E8 782 aa20.44■□□□□ 0.86
CCDC78-214ENST00000485091 MTMR7Q9Y216 660 aa20.44■□□□□ 0.86
CCDC78-214ENST00000485091 RRP1BQ14684 758 aaKnown RBP20.44■□□□□ 0.86
CCDC78-214ENST00000485091 CATIPQ7Z7H3 387 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms